Literature DB >> 20655926

Cysteine-to-serine mutants dramatically reorder the active site of human ABO(H) blood group B glycosyltransferase without affecting activity: structural insights into cooperative substrate binding.

Brock Schuman1, Mattias Persson, Roxanne C Landry, Robert Polakowski, Joel T Weadge, Nina O L Seto, Svetlana N Borisova, Monica M Palcic, Stephen V Evans.   

Abstract

A common feature in the structures of GT-A-fold-type glycosyltransferases is a mobile polypeptide loop that has been observed to participate in substrate recognition and enclose the active site upon substrate binding. This is the case for the human ABO(H) blood group B glycosyltransferase GTB, where amino acid residues 177-195 display significantly higher levels of disorder in the unliganded state than in the fully liganded state. Structural studies of mutant enzymes GTB/C80S/C196S and GTB/C80S/C196S/C209S at resolutions ranging from 1.93 to 1.40 A display the opposite trend, where the unliganded structures show nearly complete ordering of the mobile loop residues that is lost upon substrate binding. In the liganded states of the mutant structures, while the UDP moiety of the donor molecule is observed to bind in the expected location, the galactose moiety is observed to bind in a conformation significantly different from that observed for the wild-type chimeric structures. Although this would be expected to impede catalytic turnover, the kinetics of the transfer reaction are largely unaffected. These structures demonstrate that the enzymes bind the donor in a conformation more similar to the dominant solution rotamer and facilitate its gyration into the catalytically competent form. Further, by preventing active-site closure, these structures provide a basis for recently observed cooperativity in substrate binding. Finally, the mutation of C80S introduces a fully occupied UDP binding site at the enzyme dimer interface that is observed to be dependent on the binding of H antigen acceptor analog.
Copyright © 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20655926      PMCID: PMC3069981          DOI: 10.1016/j.jmb.2010.07.036

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  34 in total

Review 1.  The importance of disordered loops in ABO glycosyltransferases.

Authors:  Mark H Yazer; Monica M Palcic
Journal:  Transfus Med Rev       Date:  2005-07

2.  Donor substrate specificity of recombinant human blood group A, B and hybrid A/B glycosyltransferases expressed in Escherichia coli.

Authors:  N O Seto; C A Compston; S V Evans; D R Bundle; S A Narang; M M Palcic
Journal:  Eur J Biochem       Date:  1999-02

3.  Crystal structure of the retaining galactosyltransferase LgtC from Neisseria meningitidis in complex with donor and acceptor sugar analogs.

Authors:  K Persson; H D Ly; M Dieckelmann; W W Wakarchuk; S G Withers; N C Strynadka
Journal:  Nat Struct Biol       Date:  2001-02

4.  Conformational changes induced by binding UDP-2F-galactose to alpha-1,3 galactosyltransferase- implications for catalysis.

Authors:  Haryati Jamaluddin; Percy Tumbale; Stephen G Withers; K Ravi Acharya; Keith Brew
Journal:  J Mol Biol       Date:  2007-04-12       Impact factor: 5.469

5.  Expression of a recombinant human glycosyltransferase from a synthetic gene and its utilization for synthesis of the human blood group B trisaccharide.

Authors:  N O Seto; M M Palcic; O Hindsgaul; D R Bundle; S A Narang
Journal:  Eur J Biochem       Date:  1995-11-15

6.  Conformational states of N-acylglycine dithioesters in solution: resonance Raman studies of isotopically substituted models for enzyme-substrate complexes.

Authors:  H Lee; A C Storer; P R Carey
Journal:  Biochemistry       Date:  1983-09-27       Impact factor: 3.162

7.  Crystal structure of beta1,4-galactosyltransferase complex with UDP-Gal reveals an oligosaccharide acceptor binding site.

Authors:  B Ramakrishnan; P V Balaji; Pradman K Qasba
Journal:  J Mol Biol       Date:  2002-04-26       Impact factor: 5.469

8.  Comparative study of substrate and product binding to the human ABO(H) blood group glycosyltransferases.

Authors:  Naoto Soya; Glen K Shoemaker; Monica M Palcic; John S Klassen
Journal:  Glycobiology       Date:  2009-07-31       Impact factor: 4.313

9.  Temperature-dependent cooperativity in donor-acceptor substrate binding to the human blood group glycosyltransferases.

Authors:  Glen K Shoemaker; Naoto Soya; Monica M Palcic; John S Klassen
Journal:  Glycobiology       Date:  2008-05-28       Impact factor: 4.313

10.  Roles of individual enzyme-substrate interactions by alpha-1,3-galactosyltransferase in catalysis and specificity.

Authors:  Yingnan Zhang; G Jawahar Swaminathan; Ashlesha Deshpande; Ester Boix; Ramanathan Natesh; Zhihong Xie; K Ravi Acharya; Keith Brew
Journal:  Biochemistry       Date:  2003-11-25       Impact factor: 3.162

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  8 in total

1.  Redox state-dependent interaction of HMGB1 and cisplatin-modified DNA.

Authors:  Semi Park; Stephen J Lippard
Journal:  Biochemistry       Date:  2011-02-28       Impact factor: 3.162

2.  High Resolution Structures of the Human ABO(H) Blood Group Enzymes in Complex with Donor Analogs Reveal That the Enzymes Utilize Multiple Donor Conformations to Bind Substrates in a Stepwise Manner.

Authors:  Susannah M L Gagnon; Peter J Meloncelli; Ruixiang B Zheng; Omid Haji-Ghassemi; Asha R Johal; Svetlana N Borisova; Todd L Lowary; Stephen V Evans
Journal:  J Biol Chem       Date:  2015-09-15       Impact factor: 5.157

3.  Conserved residues Arg188 and Asp302 are critical for active site organization and catalysis in human ABO(H) blood group A and B glycosyltransferases.

Authors:  Susannah M L Gagnon; Max S G Legg; Robert Polakowski; James A Letts; Mattias Persson; Shuangjun Lin; Ruixiang Blake Zheng; Brian Rempel; Brock Schuman; Omid Haji-Ghassemi; Svetlana N Borisova; Monica M Palcic; Stephen V Evans
Journal:  Glycobiology       Date:  2018-08-01       Impact factor: 4.313

Review 4.  Crystal structures of eukaryote glycosyltransferases reveal biologically relevant enzyme homooligomers.

Authors:  Deborah Harrus; Sakari Kellokumpu; Tuomo Glumoff
Journal:  Cell Mol Life Sci       Date:  2017-09-20       Impact factor: 9.261

Review 5.  Glycosyltransferase structural biology and its role in the design of catalysts for glycosylation.

Authors:  Aram Chang; Shanteri Singh; George N Phillips; Jon S Thorson
Journal:  Curr Opin Biotechnol       Date:  2011-05-16       Impact factor: 9.740

6.  Preliminary joint neutron time-of-flight and X-ray crystallographic study of human ABO(H) blood group A glycosyltransferase.

Authors:  B Schuman; S Z Fisher; A Kovalevsky; S N Borisova; M M Palcic; L Coates; P Langan; S V Evans
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-01-22

7.  Geometric attributes of retaining glycosyltransferase enzymes favor an orthogonal mechanism.

Authors:  Brock Schuman; Stephen V Evans; Thomas M Fyles
Journal:  PLoS One       Date:  2013-08-01       Impact factor: 3.240

8.  Deep evolutionary analysis reveals the design principles of fold A glycosyltransferases.

Authors:  Rahil Taujale; Aarya Venkat; Liang-Chin Huang; Zhongliang Zhou; Wayland Yeung; Khaled M Rasheed; Sheng Li; Arthur S Edison; Kelley W Moremen; Natarajan Kannan
Journal:  Elife       Date:  2020-04-01       Impact factor: 8.140

  8 in total

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