Literature DB >> 21301064

Stochastic dynamics of cancer initiation.

Jasmine Foo1, Kevin Leder, Franziska Michor.   

Abstract

Most human cancer types result from the accumulation of multiple genetic and epigenetic alterations in a single cell. Once the first change (or changes) have arisen, tumorigenesis is initiated and the subsequent emergence of additional alterations drives progression to more aggressive and ultimately invasive phenotypes. Elucidation of the dynamics of cancer initiation is of importance for an understanding of tumor evolution and cancer incidence data. In this paper, we develop a novel mathematical framework to study the processes of cancer initiation. Cells at risk of accumulating oncogenic mutations are organized into small compartments of cells and proliferate according to a stochastic process. During each cell division, an (epi)genetic alteration may arise which leads to a random fitness change, drawn from a probability distribution. Cancer is initiated when a cell gains a fitness sufficiently high to escape from the homeostatic mechanisms of the cell compartment. To investigate cancer initiation during a human lifetime, a 'race' between this fitness process and the aging process of the patient is considered; the latter is modeled as a second stochastic Markov process in an aging dimension. This model allows us to investigate the dynamics of cancer initiation and its dependence on the mutational fitness distribution. Our framework also provides a methodology to assess the effects of different life expectancy distributions on lifetime cancer incidence. We apply this methodology to colorectal tumorigenesis while considering life expectancy data of the US population to inform the dynamics of the aging process. We study how the probability of cancer initiation prior to death, the time until cancer initiation, and the mutational profile of the cancer-initiating cell depends on the shape of the mutational fitness distribution and life expectancy of the population.

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Year:  2011        PMID: 21301064      PMCID: PMC3569097          DOI: 10.1088/1478-3975/8/1/015002

Source DB:  PubMed          Journal:  Phys Biol        ISSN: 1478-3967            Impact factor:   2.583


  57 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-21       Impact factor: 11.205

2.  Population genetics of tumor suppressor genes.

Authors:  Yoh Iwasa; Franziska Michor; Natalia L Komarova; Martin A Nowak
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Review 3.  Screening for colorectal cancer.

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Authors:  Rick Durrett; Jasmine Foo; Kevin Leder; John Mayberry; Franziska Michor
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6.  Promoter hypermethylation and BRCA1 inactivation in sporadic breast and ovarian tumors.

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Journal:  J Natl Cancer Inst       Date:  2000-04-05       Impact factor: 13.506

7.  An estimation of proliferative population size in stomach, jejunum and colon of DBA-2 mice.

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Journal:  Cell Tissue Kinet       Date:  1973-03

8.  MOZ-TIF2, but not BCR-ABL, confers properties of leukemic stem cells to committed murine hematopoietic progenitors.

Authors:  Brian J P Huntly; Hirokazu Shigematsu; Kenji Deguchi; Benjamin H Lee; Shinichi Mizuno; Nicky Duclos; Rebecca Rowan; Sonia Amaral; David Curley; Ifor R Williams; Koichi Akashi; D Gary Gilliland
Journal:  Cancer Cell       Date:  2004-12       Impact factor: 31.743

9.  Mutation and cancer: statistical study of retinoblastoma.

Authors:  A G Knudson
Journal:  Proc Natl Acad Sci U S A       Date:  1971-04       Impact factor: 11.205

10.  A two-stage theory of carcinogenesis in relation to the age distribution of human cancer.

Authors:  P ARMITAGE; R DOLL
Journal:  Br J Cancer       Date:  1957-06       Impact factor: 7.640

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  22 in total

1.  Analysis of a mathematical model of apoptosis: individual differences and malfunction in programmed cell death.

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2.  Spatial structure increases the waiting time for cancer.

Authors:  Erik A Martens; Rumen Kostadinov; Carlo C Maley; Oskar Hallatschek
Journal:  New J Phys       Date:  2011-11-28       Impact factor: 3.729

Review 3.  Tumor evolution: Linear, branching, neutral or punctuated?

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Journal:  Biochim Biophys Acta Rev Cancer       Date:  2017-01-19       Impact factor: 10.680

4.  Quantifying the Dynamics of Field Cancerization in Tobacco-Related Head and Neck Cancer: A Multiscale Modeling Approach.

Authors:  Marc D Ryser; Walter T Lee; Neal E Ready; Kevin Z Leder; Jasmine Foo
Journal:  Cancer Res       Date:  2016-10-20       Impact factor: 12.701

5.  Premetastatic shifts of endogenous and exogenous mutational processes support consolidative therapy in EGFR-driven lung adenocarcinoma.

Authors:  J Nicholas Fisk; Amandeep R Mahal; Alex Dornburg; Stephen G Gaffney; Sanjay Aneja; Joseph N Contessa; David Rimm; James B Yu; Jeffrey P Townsend
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Review 6.  Modeling Tumor Clonal Evolution for Drug Combinations Design.

Authors:  Boyang Zhao; Michael T Hemann; Douglas A Lauffenburger
Journal:  Trends Cancer       Date:  2016-03

7.  Spatial invasion dynamics on random and unstructured meshes: implications for heterogeneous tumor populations.

Authors:  V S K Manem; M Kohandel; N L Komarova; S Sivaloganathan
Journal:  J Theor Biol       Date:  2014-01-23       Impact factor: 2.691

Review 8.  The mathematics of cancer: integrating quantitative models.

Authors:  Philipp M Altrock; Lin L Liu; Franziska Michor
Journal:  Nat Rev Cancer       Date:  2015-12       Impact factor: 60.716

9.  An agent-based model of cancer stem cell initiated avascular tumour growth and metastasis: the effect of seeding frequency and location.

Authors:  Kerri-Ann Norton; Aleksander S Popel
Journal:  J R Soc Interface       Date:  2014-11-06       Impact factor: 4.118

10.  An Evolutionary Approach for Identifying Driver Mutations in Colorectal Cancer.

Authors:  Jasmine Foo; Lin L Liu; Kevin Leder; Markus Riester; Yoh Iwasa; Christoph Lengauer; Franziska Michor
Journal:  PLoS Comput Biol       Date:  2015-09-17       Impact factor: 4.475

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