Literature DB >> 21300081

A multiscale hybrid approach for vasculogenesis and related potential blocking therapies.

Marco Scianna1, Luca Munaron, Luigi Preziosi.   

Abstract

Solid tumors must recruit and form new blood vessels for maintenance, growth and detachments of metastases. Discovering drugs that block malignant angiogenesis is thus an important approach in cancer treatment and has given rise to multiple in vitro and in silico models. The present hybrid individual cell-based model incorporates some underlying biochemical events relating more closely the classical Cellular Potts Model (CPM) parameters to subcellular mechanisms and to the activation of specific signaling pathways. The model spans the three fundamental biological levels: at the extracellular level a continuous model describes secretion, diffusion, uptake and decay of the autocrine VEGF; at the cellular level, an extended lattice CPM, based on a system energy reduction, reproduces cell dynamics such as migration, adhesion and chemotaxis; at the subcellular level, a set of reaction-diffusion equations describes a simplified VEGF-induced calcium-dependent intracellular pathway. The results agree with the known interplay between calcium signals and VEGF dynamics and with their role in malignant vasculogenesis. Moreover, the analysis of the link between the microscopic subcellular dynamics and the macroscopic cell behaviors confirms the efficiency of some pharmacological interventions that are currently in use and, more interestingly, proposes some new therapeutic approaches, that are counter-intuitive but potentially effective.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21300081     DOI: 10.1016/j.pbiomolbio.2011.01.004

Source DB:  PubMed          Journal:  Prog Biophys Mol Biol        ISSN: 0079-6107            Impact factor:   3.667


  14 in total

1.  Multilevel complexity of calcium signaling: Modeling angiogenesis.

Authors:  Luca Munaron; Marco Scianna
Journal:  World J Biol Chem       Date:  2012-06-26

Review 2.  Multi-scale modeling in biology: how to bridge the gaps between scales?

Authors:  Zhilin Qu; Alan Garfinkel; James N Weiss; Melissa Nivala
Journal:  Prog Biophys Mol Biol       Date:  2011-06-23       Impact factor: 3.667

3.  CompuCell3D Simulations Reproduce Mesenchymal Cell Migration on Flat Substrates.

Authors:  Ismael Fortuna; Gabriel C Perrone; Monique S Krug; Eduarda Susin; Julio M Belmonte; Gilberto L Thomas; James A Glazier; Rita M C de Almeida
Journal:  Biophys J       Date:  2020-04-30       Impact factor: 4.033

4.  Systems biology and cancer.

Authors:  Ana M Soto; Carlos Sonnenschein; Philip K Maini; Denis Noble
Journal:  Prog Biophys Mol Biol       Date:  2011-08       Impact factor: 3.667

5.  The effects of cell compressibility, motility and contact inhibition on the growth of tumor cell clusters using the Cellular Potts Model.

Authors:  Jonathan F Li; John Lowengrub
Journal:  J Theor Biol       Date:  2013-11-06       Impact factor: 2.691

6.  A cell-based model of extracellular-matrix-guided endothelial cell migration during angiogenesis.

Authors:  Josephine T Daub; Roeland M H Merks
Journal:  Bull Math Biol       Date:  2013-03-15       Impact factor: 1.758

Review 7.  Cell-oriented modeling of angiogenesis.

Authors:  Diego Guidolin; Piera Rebuffat; Giovanna Albertin
Journal:  ScientificWorldJournal       Date:  2011-10-18

8.  Mechanical cell-matrix feedback explains pairwise and collective endothelial cell behavior in vitro.

Authors:  René F M van Oers; Elisabeth G Rens; Danielle J LaValley; Cynthia A Reinhart-King; Roeland M H Merks
Journal:  PLoS Comput Biol       Date:  2014-08-14       Impact factor: 4.475

9.  Soliton driven angiogenesis.

Authors:  L L Bonilla; M Carretero; F Terragni; B Birnir
Journal:  Sci Rep       Date:  2016-08-09       Impact factor: 4.379

10.  Virtual-tissue computer simulations define the roles of cell adhesion and proliferation in the onset of kidney cystic disease.

Authors:  Julio M Belmonte; Sherry G Clendenon; Guilherme M Oliveira; Maciej H Swat; Evan V Greene; Srividhya Jeyaraman; James A Glazier; Robert L Bacallao
Journal:  Mol Biol Cell       Date:  2016-05-18       Impact factor: 4.138

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