Warning: Undefined array key "mm" in /www/wwwroot/www.ai-bt.com/si.php on line 10 Deprecated: trim(): Passing null to parameter #1 ($string) of type string is deprecated in /www/wwwroot/www.ai-bt.com/si.php on line 10 Phylogeny of replication initiator protein TrfA reveals a highly divergent clade of incompatibility group P1 plasmids.

Literature DB >> 21296948

Phylogeny of replication initiator protein TrfA reveals a highly divergent clade of incompatibility group P1 plasmids.

Abstract

Incompatibility group P1 (IncP-1) plasmid diversity was evaluated based on replication initiator protein (TrfA) phylogeny. A new and highly divergent clade was identified. Replication assays indicated that TrfA of recently discovered IncP-1 plasmids from Xylella fastidiosa and Verminephrobacter eiseniae initiated plasmid replication using cognate or heterologous origins of replication.

Entities: Gene

Mesh：

Substances：

Year: 2011 PMID： 21296948 PMCID： PMC3067460 DOI： 10.1128/AEM.02789-10

Source DB: PubMed Journal: Appl Environ Microbiol ISSN： 0099-2240 Impact factor: 4.792

24 in total

1. Isolation and screening of plasmids from the epilithon which mobilize recombinant plasmid pD10.

Authors: K E Hill; A J Weightman; J C Fry
Journal: Appl Environ Microbiol Date: 1992-04 Impact factor: 4.792

2. All IncP-1 plasmid subgroups, including the novel epsilon subgroup, are prevalent in the influent of a Danish wastewater treatment plant.

Authors: Martin Iain Bahl; Mette Burmølle; Annelein Meisner; Lars Hestbjerg Hansen; Søren J Sørensen
Journal: Plasmid Date: 2009-06-06 Impact factor: 3.466

3. Comparison of the organisation of the genomes of phenotypically diverse plasmids of incompatibility group P: members of the IncP beta sub-group are closely related.

Authors: C A Smith; C M Thomas
Journal: Mol Gen Genet Date: 1987-03

4. Functional characterization of replication and stability factors of an incompatibility group P-1 plasmid from Xylella fastidiosa.

Authors: Min Woo Lee; Elizabeth E Rogers; Drake C Stenger
Journal: Appl Environ Microbiol Date: 2010-10-08 Impact factor: 4.792

5. Comparative genomics of pAKD4, the prototype IncP-1delta plasmid with a complete backbone.

Authors: Diya Sen; Hirokazu Yano; Haruo Suzuki; Jaroslaw E Król; Linda Rogers; Celeste J Brown; Eva M Top
Journal: Plasmid Date: 2009-12-16 Impact factor: 3.466

6. Verminephrobacter eiseniae gen. nov., sp. nov., a nephridial symbiont of the earthworm Eisenia foetida (Savigny).

Authors: Nicolás Pinel; Seana K Davidson; David A Stahl
Journal: Int J Syst Evol Microbiol Date: 2008-09 Impact factor: 2.747

7. The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal tar-contaminated sediment, reveals physiological and metabolic versatility and evolution through extensive horizontal gene transfer.

Authors: Jane M Yagi; David Sims; Thomas Brettin; David Bruce; Eugene L Madsen
Journal: Environ Microbiol Date: 2009-05-18 Impact factor: 5.491

Phylogeny of replication initiator protein TrfA reveals a highly divergent clade of incompatibility group P1 plasmids.

1. Isolation and screening of plasmids from the epilithon which mobilize recombinant plasmid pD10.

2. All IncP-1 plasmid subgroups, including the novel epsilon subgroup, are prevalent in the influent of a Danish wastewater treatment plant.

3. Comparison of the organisation of the genomes of phenotypically diverse plasmids of incompatibility group P: members of the IncP beta sub-group are closely related.

4. Functional characterization of replication and stability factors of an incompatibility group P-1 plasmid from Xylella fastidiosa.

5. Comparative genomics of pAKD4, the prototype IncP-1delta plasmid with a complete backbone.

6. Verminephrobacter eiseniae gen. nov., sp. nov., a nephridial symbiont of the earthworm Eisenia foetida (Savigny).

7. The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal tar-contaminated sediment, reveals physiological and metabolic versatility and evolution through extensive horizontal gene transfer.

8. Complete genome sequence of Burkholderia glumae BGR1.

9. Chromosome-based genetic complementation system for Xylella fastidiosa.

10. Nucleotide sequence of the region of the origin of replication of the broad host range plasmid RK2.

1. Host range diversification within the IncP-1 plasmid group.

2. A conjugative 38 kB plasmid is present in multiple subspecies of Xylella fastidiosa.