Literature DB >> 21294564

Atomic view of calcium-induced clustering of phosphatidylserine in mixed lipid bilayers.

John M Boettcher1, Rebecca L Davis-Harrison, Mary C Clay, Andrew J Nieuwkoop, Y Zenmei Ohkubo, Emad Tajkhorshid, James H Morrissey, Chad M Rienstra.   

Abstract

Membranes play key regulatory roles in biologicpan class="Chemical">aln> processes, with bilayer composition exerting marked effects on binding affinities and catalytic activities of a number of membrane-associated proteins. In particular, proteins involved in diverse processes such as vesicle fusion, intracellular signaling cascades, and blood coagulation interact specifically with anionic lipids such as phosphatidylserine (PS) in the presence of Ca(2+) ions. While Ca(2+) is suspected to induce PS clustering in mixed phospholipid bilayers, the detailed structural effects of this ion on anionic lipids are not established. In this study, combining magic angle spinning (MAS) solid-state NMR (SSNMR) measurements of isotopically labeled serine headgroups in mixed lipid bilayers with molecular dynamics (MD) simulations of PS lipid bilayers in the presence of different counterions, we provide site-resolved insights into the effects of Ca(2+) on the structure and dynamics of lipid bilayers. Ca(2+)-induced conformational changes of PS in mixed bilayers are observed in both liposomes and Nanodiscs, a nanoscale membrane mimetic of bilayer patches. Site-resolved multidimensional correlation SSNMR spectra of bilayers containing (13)C,(15)N-labeled PS demonstrate that Ca(2+) ions promote two major PS headgroup conformations, which are well resolved in two-dimensional (13)C-(13)C, (15)N-(13)C, and (31)P-(13)C spectra. The results of MD simulations performed on PS lipid bilayers in the presence or absence of Ca(2+) provide an atomic view of the conformational effects underlying the observed spectra.

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Year:  2011        PMID: 21294564      PMCID: PMC3069658          DOI: 10.1021/bi1013694

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  52 in total

1.  Ca(2+) bridges the C2 membrane-binding domain of protein kinase Calpha directly to phosphatidylserine.

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Review 2.  Membrane recognition by phospholipid-binding domains.

Authors:  Mark A Lemmon
Journal:  Nat Rev Mol Cell Biol       Date:  2008-02       Impact factor: 94.444

3.  Ca2+, Mg2+, Li+, Na+, and K+ distributions in the headgroup region of binary membranes of phosphatidylcholine and phosphatidylserine as seen by deuterium NMR.

Authors:  M Roux; M Bloom
Journal:  Biochemistry       Date:  1990-07-31       Impact factor: 3.162

4.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

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Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

Review 5.  Surface exposure of phosphatidylserine in pathological cells.

Authors:  R F A Zwaal; P Comfurius; E M Bevers
Journal:  Cell Mol Life Sci       Date:  2005-05       Impact factor: 9.261

6.  Phosphatidylserine membrane domain clustering induced by annexin A2/S100A10 heterotetramer.

Authors:  Manuela Menke; Volker Gerke; Claudia Steinem
Journal:  Biochemistry       Date:  2005-11-22       Impact factor: 3.162

Review 7.  The distribution and function of phosphatidylserine in cellular membranes.

Authors:  Peter A Leventis; Sergio Grinstein
Journal:  Annu Rev Biophys       Date:  2010       Impact factor: 12.981

8.  Structure and fluctuations of charged phosphatidylserine bilayers in the absence of salt.

Authors:  Horia I Petrache; Stephanie Tristram-Nagle; Klaus Gawrisch; Daniel Harries; V Adrian Parsegian; John F Nagle
Journal:  Biophys J       Date:  2004-03       Impact factor: 4.033

9.  Chemical shift referencing in MAS solid state NMR.

Authors:  Corey R Morcombe; Kurt W Zilm
Journal:  J Magn Reson       Date:  2003-06       Impact factor: 2.229

10.  Distinct structural and adhesive roles of Ca2+ in membrane binding of blood coagulation factors.

Authors:  Y Zenmei Ohkubo; Emad Tajkhorshid
Journal:  Structure       Date:  2008-01       Impact factor: 5.006

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  41 in total

1.  Hydration dynamics as an intrinsic ruler for refining protein structure at lipid membrane interfaces.

Authors:  Chi-Yuan Cheng; Jobin Varkey; Mark R Ambroso; Ralf Langen; Songi Han
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-30       Impact factor: 11.205

Review 2.  Nanoscale studies of protein-membrane interactions in blood clotting.

Authors:  J H Morrissey; E Tajkhorshid; C M Rienstra
Journal:  J Thromb Haemost       Date:  2011-07       Impact factor: 5.824

3.  Local electrostatic interactions determine the diameter of fusion pores.

Authors:  Alenka Guček; Jernej Jorgačevski; Urszula Górska; Boštjan Rituper; Marko Kreft; Robert Zorec
Journal:  Channels (Austin)       Date:  2015       Impact factor: 2.581

Review 4.  Nanodiscs in Membrane Biochemistry and Biophysics.

Authors:  Ilia G Denisov; Stephen G Sligar
Journal:  Chem Rev       Date:  2017-02-08       Impact factor: 60.622

5.  Calcium-Lipid Interactions Observed with Isotope-Edited Infrared Spectroscopy.

Authors:  Mason L Valentine; Alfredo E Cardenas; Ron Elber; Carlos R Baiz
Journal:  Biophys J       Date:  2020-04-21       Impact factor: 4.033

6.  The yeast vacuolar ABC transporter Ybt1p regulates membrane fusion through Ca2+ transport modulation.

Authors:  Terry L Sasser; Mark Padolina; Rutilio A Fratti
Journal:  Biochem J       Date:  2012-12-15       Impact factor: 3.857

Review 7.  Nanodiscs as a new tool to examine lipid-protein interactions.

Authors:  Mary A Schuler; Ilia G Denisov; Stephen G Sligar
Journal:  Methods Mol Biol       Date:  2013

8.  Cations induce shape remodeling of negatively charged phospholipid membranes.

Authors:  Z T Graber; Z Shi; T Baumgart
Journal:  Phys Chem Chem Phys       Date:  2017-06-14       Impact factor: 3.676

9.  Coordination of copper to the membrane-bound form of α-synuclein.

Authors:  Christopher G Dudzik; Eric D Walter; Benjamin S Abrams; Melissa S Jurica; Glenn L Millhauser
Journal:  Biochemistry       Date:  2012-12-26       Impact factor: 3.162

10.  Calcium-Induced Lipid Nanocluster Structures: Sculpturing of the Plasma Membrane.

Authors:  Michael J Hallock; Alexander I Greenwood; Yan Wang; James H Morrissey; Emad Tajkhorshid; Chad M Rienstra; Taras V Pogorelov
Journal:  Biochemistry       Date:  2018-12-04       Impact factor: 3.162

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