Literature DB >> 18184585

Distinct structural and adhesive roles of Ca2+ in membrane binding of blood coagulation factors.

Y Zenmei Ohkubo1, Emad Tajkhorshid.   

Abstract

The GLA domain, a common membrane-anchoring domain of several serine protease coagulation factors, is a key element in membrane association and activation of these factors in a highly Ca2+-dependent manner. However, the critical role of Ca2+ ions in binding is only poorly understood. Here, we present the atomic model of a membrane-bound GLA domain by using MD simulations of the GLA domain of human factor VIIa and an anionic lipid bilayer. The binding is furnished through a complete insertion of the omega-loop into the membrane and through direct interactions of structurally bound Ca2+ ions and protein side chains with negative lipids. The model suggests that Ca2+ ions play two distinct roles in the process: the four inner Ca2+ ions are primarily responsible for optimal folding of the GLA domain for membrane insertion, whereas the outer Ca2+ ions anchor the protein to the membrane through direct contacts with lipids.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18184585     DOI: 10.1016/j.str.2007.10.021

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  38 in total

1.  Microscopic Characterization of GRP1 PH Domain Interaction with Anionic Membranes.

Authors:  Shashank Pant; Emad Tajkhorshid
Journal:  J Comput Chem       Date:  2019-11-25       Impact factor: 3.376

2.  Indirect role of Ca2+ in the assembly of extracellular matrix proteins.

Authors:  Jiankuai Diao; Emad Tajkhorshid
Journal:  Biophys J       Date:  2008-03-21       Impact factor: 4.033

Review 3.  Nanoscale studies of protein-membrane interactions in blood clotting.

Authors:  J H Morrissey; E Tajkhorshid; C M Rienstra
Journal:  J Thromb Haemost       Date:  2011-07       Impact factor: 5.824

Review 4.  Efficient Exploration of Membrane-Associated Phenomena at Atomic Resolution.

Authors:  Josh V Vermaas; Javier L Baylon; Mark J Arcario; Melanie P Muller; Zhe Wu; Taras V Pogorelov; Emad Tajkhorshid
Journal:  J Membr Biol       Date:  2015-05-22       Impact factor: 1.843

5.  Membrane-induced structural rearrangement and identification of a novel membrane anchor in talin F2F3.

Authors:  Mark J Arcario; Emad Tajkhorshid
Journal:  Biophys J       Date:  2014-11-04       Impact factor: 4.033

6.  Multiplexed silicon photonic sensor arrays enable facile characterization of coagulation protein binding to nanodiscs with variable lipid content.

Authors:  Ellen M Muehl; Joshua M Gajsiewicz; Sara M Medfisch; Zachary S B Wiersma; James H Morrissey; Ryan C Bailey
Journal:  J Biol Chem       Date:  2017-08-11       Impact factor: 5.157

7.  Characterization of Lipid-Protein Interactions and Lipid-Mediated Modulation of Membrane Protein Function through Molecular Simulation.

Authors:  Melanie P Muller; Tao Jiang; Chang Sun; Muyun Lihan; Shashank Pant; Paween Mahinthichaichan; Anda Trifan; Emad Tajkhorshid
Journal:  Chem Rev       Date:  2019-04-12       Impact factor: 60.622

8.  Influence of membrane composition on the enhancement of factor VIIa/tissue factor activity by magnesium ions.

Authors:  Narjes Tavoosi; James H Morrissey
Journal:  Thromb Haemost       Date:  2013-11-28       Impact factor: 5.249

9.  Structural and functional studies of γ-carboxyglutamic acid domains of factor VIIa and activated Protein C: role of magnesium at physiological calcium.

Authors:  Kanagasabai Vadivel; Sayeh Agah; Amanda S Messer; Duilio Cascio; Madhu S Bajaj; Sriram Krishnaswamy; Charles T Esmon; Kaillathe Padmanabhan; S Paul Bajaj
Journal:  J Mol Biol       Date:  2013-02-20       Impact factor: 5.469

Review 10.  Blood clotting reactions on nanoscale phospholipid bilayers.

Authors:  James H Morrissey; Vincent Pureza; Rebecca L Davis-Harrison; Stephen G Sligar; Y Zenmei Ohkubo; Emad Tajkhorshid
Journal:  Thromb Res       Date:  2008       Impact factor: 3.944

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.