Literature DB >> 21289489

Assembly, disassembly and recycling: the dynamics of exon junction complexes.

Fulvia Bono1, Niels H Gehring.   

Abstract

Efficient gene expression requires that, during their lifetime, mRNAs associate with different sets of RNA binding proteins to form messenger ribonucleoprotein particles (mRNPs). The protein components of mRNPs are essential for the correct post-transcriptional function and regulation of mRNAs. mRNPs are constitutively remodeled during the maturation of the mRNA in the nucleus and downstream steps in the cytoplasm, and can also change depending on the cellular environment. Here we review the current understanding of the biochemical and structural aspects of a central mRNP component and regulator, the exon junction complex (EJC).

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Year:  2011        PMID: 21289489      PMCID: PMC3127076          DOI: 10.4161/rna.8.1.13618

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  58 in total

1.  The spliceosome deposits multiple proteins 20-24 nucleotides upstream of mRNA exon-exon junctions.

Authors:  H Le Hir; E Izaurralde; L E Maquat; M J Moore
Journal:  EMBO J       Date:  2000-12-15       Impact factor: 11.598

2.  The protein Mago provides a link between splicing and mRNA localization.

Authors:  H Le Hir; D Gatfield; I C Braun; D Forler; E Izaurralde
Journal:  EMBO Rep       Date:  2001-11-21       Impact factor: 8.807

3.  An efficient protein complex purification method for functional proteomics in higher eukaryotes.

Authors:  Daniel Forler; Thomas Köcher; Michaela Rode; Mark Gentzel; Elisa Izaurralde; Matthias Wilm
Journal:  Nat Biotechnol       Date:  2002-12-16       Impact factor: 54.908

4.  The exon junction complex is detected on CBP80-bound but not eIF4E-bound mRNA in mammalian cells: dynamics of mRNP remodeling.

Authors:  Fabrice Lejeune; Yasuhito Ishigaki; Xiaojie Li; Lynne E Maquat
Journal:  EMBO J       Date:  2002-07-01       Impact factor: 11.598

5.  Translation is required to remove Y14 from mRNAs in the cytoplasm.

Authors:  Josée Dostie; Gideon Dreyfuss
Journal:  Curr Biol       Date:  2002-07-09       Impact factor: 10.834

6.  Insights into the recruitment of the NMD machinery from the crystal structure of a core EJC-UPF3b complex.

Authors:  Gretel Buchwald; Judith Ebert; Claire Basquin; Jerome Sauliere; Uma Jayachandran; Fulvia Bono; Hervé Le Hir; Elena Conti
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-17       Impact factor: 11.205

7.  Importin 13: a novel mediator of nuclear import and export.

Authors:  J M Mingot; S Kostka; R Kraft; E Hartmann; D Görlich
Journal:  EMBO J       Date:  2001-07-16       Impact factor: 11.598

8.  Drosophila Y14 shuttles to the posterior of the oocyte and is required for oskar mRNA transport.

Authors:  O Hachet; A Ephrussi
Journal:  Curr Biol       Date:  2001-10-30       Impact factor: 10.834

9.  The RNA-binding protein Tsunagi interacts with Mago Nashi to establish polarity and localize oskar mRNA during Drosophila oogenesis.

Authors:  S E Mohr; S T Dillon; R E Boswell
Journal:  Genes Dev       Date:  2001-11-01       Impact factor: 11.361

10.  Barentsz is essential for the posterior localization of oskar mRNA and colocalizes with it to the posterior pole.

Authors:  F J van Eeden; I M Palacios; M Petronczki; M J Weston; D St Johnston
Journal:  J Cell Biol       Date:  2001-07-30       Impact factor: 10.539

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  39 in total

1.  The induction of serine/threonine protein phosphorylations by a PDGFR/TrkA chimera in stably transfected PC12 cells.

Authors:  Jordane Biarc; Robert J Chalkley; A L Burlingame; Ralph A Bradshaw
Journal:  Mol Cell Proteomics       Date:  2011-10-25       Impact factor: 5.911

2.  40S subunit dissociation and proteasome-dependent RNA degradation in nonfunctional 25S rRNA decay.

Authors:  Kotaro Fujii; Makoto Kitabatake; Tomoko Sakata; Mutsuhito Ohno
Journal:  EMBO J       Date:  2012-04-13       Impact factor: 11.598

Review 3.  Coupling pre-mRNA processing to transcription on the RNA factory assembly line.

Authors:  Kuo-Ming Lee; Woan-Yuh Tarn
Journal:  RNA Biol       Date:  2013-02-07       Impact factor: 4.652

4.  Phosphorylation status of human RNA-binding protein 8A in cells and its inhibitory regulation by Magoh.

Authors:  Yasuhito Ishigaki; Yuka Nakamura; Takanori Tatsuno; Shaofu Ma; Naohisa Tomosugi
Journal:  Exp Biol Med (Maywood)       Date:  2014-10-27

5.  Second-generation derivatives of the eukaryotic translation initiation inhibitor pateamine A targeting eIF4A as potential anticancer agents.

Authors:  Woon-Kai Low; Jing Li; Mingzhao Zhu; Sai Shilpa Kommaraju; Janki Shah-Mittal; Ken Hull; Jun O Liu; Daniel Romo
Journal:  Bioorg Med Chem       Date:  2013-12-04       Impact factor: 3.641

Review 6.  Nonsense-Mediated mRNA Decay: Degradation of Defective Transcripts Is Only Part of the Story.

Authors:  Feng He; Allan Jacobson
Journal:  Annu Rev Genet       Date:  2015-10-02       Impact factor: 16.830

Review 7.  Upf proteins: highly conserved factors involved in nonsense mRNA mediated decay.

Authors:  Puneet Gupta; Yan-Ruide Li
Journal:  Mol Biol Rep       Date:  2017-12-27       Impact factor: 2.316

8.  Generation of a Magoh conditional allele in mice.

Authors:  John J McMahon; Lei Shi; Debra L Silver
Journal:  Genesis       Date:  2014-05-09       Impact factor: 2.487

9.  RIPiT-Seq: a high-throughput approach for footprinting RNA:protein complexes.

Authors:  Guramrit Singh; Emiliano P Ricci; Melissa J Moore
Journal:  Methods       Date:  2013-10-02       Impact factor: 3.608

10.  The eIF4AIII RNA helicase is a critical determinant of human cytomegalovirus replication.

Authors:  Ben Ziehr; Erik Lenarcic; Chad Cecil; Nathaniel J Moorman
Journal:  Virology       Date:  2016-01-08       Impact factor: 3.616

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