Literature DB >> 21287211

Salinivibrio sharmensis sp. nov., a novel haloalkaliphilic bacterium from a saline lake in Ras Mohammed Park (Egypt).

Ida Romano1, Pierangelo Orlando, Agata Gambacorta, Barbara Nicolaus, Laura Dipasquale, Javier Pascual, Assunta Giordano, Licia Lama.   

Abstract

A novel haloalkaliphilic, facultative anaerobic and Gram-negative Salinivibrio-like microorganism (designated strain BAG(T)) was recovered from a saline lake in Ras Mohammed Park (Egypt). Cells were motile, curved rods, not spore-forming and occurred singly. Strain BAG(T) grew optimally at 35°C (temperature growth range 25-40°C) with 10.0% (w/v) NaCl [NaCl growth range 6.0-16.0% (w/v)] and at pH 9.0 (pH growth range 6.0-10.0). Strain BAG(T) had phosphatidylethanolamine (PEA) and phosphatidylglycerol (PG) as the main polar lipids, C16:0 (54.0%) and C16:1 (26.0%) as the predominant cellular fatty acids and Q-8 as the major respiratory quinone. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain BAG(T) was a member of Salinivibrio genus, with the highest sequence similarities of 99.1, 98.4 and 98.1% to Salinivibrio siamensis JCM 14472(T), Salinivibrio proteolyticus DSM 19052(T) and Salinivibrio costicola subsp. alcaliphilus DSM 16359(T), respectively. DNA-DNA hybridization values of strain BAG(T) with members of Salinivibrio genus were lower than 55.0%. DNA G + C content was 51.0 mol%. On the basis of the polyphasic taxonomic results revealed in this study, strain BAG(T) should be classified as a novel species of Salinivibrio genus, for which the name Salinivibrio sharmensis sp. nov. is proposed, with the type strain BAG(T) (=ATCC BAA-1319(T) = DSM 18182(T)).

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Year:  2011        PMID: 21287211     DOI: 10.1007/s00792-010-0349-9

Source DB:  PubMed          Journal:  Extremophiles        ISSN: 1431-0651            Impact factor:   2.395


  28 in total

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3.  jModelTest: phylogenetic model averaging.

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Authors:  R S Ronimus; L E Parker; H W Morgan
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5.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

6.  Purification and characterization of a protease produced by an aerobic haloalkaliphilic species belonging to the Salinivibrio genus.

Authors:  Licia Lama; Ida Romano; Valeria Calandrelli; Barbara Nicolaus; Agata Gambacorta
Journal:  Res Microbiol       Date:  2005-02-19       Impact factor: 3.992

7.  Analysis of 16S rRNA gene sequences of Vibrio costicola strains: description of Salinivibrio costicola gen. nov., comb. nov.

Authors:  E Mellado; E R Moore; J J Nieto; A Ventosa
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8.  Thermoanaerobacterium thermostercus sp. nov., a new anaerobic thermophilic hydrogen-producing bacterium from buffalo-dung.

Authors:  Ida Romano; Laura Dipasquale; Pierangelo Orlando; Licia Lama; Giuliana d'Ippolito; Javier Pascual; Agata Gambacorta
Journal:  Extremophiles       Date:  2010-02-14       Impact factor: 2.395

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10.  Characterization of a novel halophilic archaeon, Halobiforma haloterrestris gen. nov., sp. nov., and transfer of Natronobacterium nitratireducens to Halobiforma nitratireducens comb. nov.

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Journal:  Int J Syst Evol Microbiol       Date:  2002-11       Impact factor: 2.747

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2.  Genomic and phenotypic attributes of novel salinivibrios from stromatolites, sediment and water from a high altitude lake.

Authors:  Marta F Gorriti; Graciela M Dias; Luciane A Chimetto; Amaro E Trindade-Silva; Bruno S Silva; Milene M A Mesquita; Gustavo B Gregoracci; Maria E Farias; Cristiane C Thompson; Fabiano L Thompson
Journal:  BMC Genomics       Date:  2014-06-13       Impact factor: 3.969

3.  Egypt's Red Sea coast: phylogenetic analysis of cultured microbial consortia in industrialized sites.

Authors:  Ghada A Mustafa; Amr Abd-Elgawad; Alyaa M Abdel-Haleem; Rania Siam
Journal:  Front Microbiol       Date:  2014-08-11       Impact factor: 5.640

4.  Draft Genome Sequences of Salinivibrio proteolyticus, Salinivibrio sharmensis, Salinivibrio siamensis, Salinivibrio costicola subsp. alcaliphilus, Salinivibrio costicola subsp. vallismortis, and 29 New Isolates Belonging to the Genus Salinivibrio.

Authors:  Clara López-Hermoso; Rafael R de la Haba; Cristina Sánchez-Porro; Sion C Bayliss; Edward J Feil; Antonio Ventosa
Journal:  Genome Announc       Date:  2017-07-06

5.  Assessment of MultiLocus Sequence Analysis As a Valuable Tool for the Classification of the Genus Salinivibrio.

Authors:  Clara López-Hermoso; Rafael R de la Haba; Cristina Sánchez-Porro; R Thane Papke; Antonio Ventosa
Journal:  Front Microbiol       Date:  2017-06-22       Impact factor: 5.640

6.  Comparative Genomics and Phylogenomic Analysis of the Genus Salinivibrio.

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Journal:  Front Microbiol       Date:  2019-09-11       Impact factor: 5.640

7.  The Lipid A from the haloalkaliphilic bacterium Salinivibrio sharmensis strain BAG(T).

Authors:  Sara Carillo; Giuseppina Pieretti; Buko Lindner; Ida Romano; Barbara Nicolaus; Rosa Lanzetta; Michelangelo Parrilli; Maria Michela Corsaro
Journal:  Mar Drugs       Date:  2013-01-21       Impact factor: 5.118

8.  Life in High Salt Concentrations with Changing Environmental Conditions: Insights from Genomic and Phenotypic Analysis of Salinivibrio sp.

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  8 in total

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