Literature DB >> 21283132

Genomic imprinting in mammals: its life cycle, molecular mechanisms and reprogramming.

Yufeng Li1, Hiroyuki Sasaki.   

Abstract

Genomic imprinting, an epigenetic gene-marking phenomenon that occurs in the germline, leads to parental-origin-specific expression of a small subset of genes in mammals. Imprinting has a great impact on normal mammalian development, fetal growth, metabolism and adult behavior. The epigenetic imprints regarding the parental origin are established during male and female gametogenesis, passed to the zygote through fertilization, maintained throughout development and adult life, and erased in primordial germ cells before the new imprints are set. In this review, we focus on the recent discoveries on the mechanisms involved in the reprogramming and maintenance of the imprints. We also discuss the epigenetic changes that occur at imprinted loci in induced pluripotent stem cells.

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Year:  2011        PMID: 21283132      PMCID: PMC3193417          DOI: 10.1038/cr.2011.15

Source DB:  PubMed          Journal:  Cell Res        ISSN: 1001-0602            Impact factor:   25.617


  72 in total

Review 1.  Imprinted noncoding RNAs.

Authors:  Jo Peters; Joan E Robson
Journal:  Mamm Genome       Date:  2008-09-25       Impact factor: 2.957

2.  CG dinucleotide periodicities recognized by the Dnmt3a-Dnmt3L complex are distinctive at retroelements and imprinted domains.

Authors:  Jacob L Glass; Melissa J Fazzari; Anne C Ferguson-Smith; John M Greally
Journal:  Mamm Genome       Date:  2009-11-17       Impact factor: 2.957

3.  Histone methylation is mechanistically linked to DNA methylation at imprinting control regions in mammals.

Authors:  Amandine Henckel; Kazuhiko Nakabayashi; Lionel A Sanz; Robert Feil; Kenichiro Hata; Philippe Arnaud
Journal:  Hum Mol Genet       Date:  2009-06-10       Impact factor: 6.150

4.  Clone- and gene-specific aberrations of parental imprinting in human induced pluripotent stem cells.

Authors:  Marjorie Pick; Yonatan Stelzer; Ori Bar-Nur; Yoav Mayshar; Amir Eden; Nissim Benvenisty
Journal:  Stem Cells       Date:  2009-11       Impact factor: 6.277

Review 5.  Genomic imprinting disorders in humans: a mini-review.

Authors:  Merlin G Butler
Journal:  J Assist Reprod Genet       Date:  2009-10-21       Impact factor: 3.412

6.  Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1.

Authors:  Mamta Tahiliani; Kian Peng Koh; Yinghua Shen; William A Pastor; Hozefa Bandukwala; Yevgeny Brudno; Suneet Agarwal; Lakshminarayan M Iyer; David R Liu; L Aravind; Anjana Rao
Journal:  Science       Date:  2009-04-16       Impact factor: 47.728

7.  Transcription is required for establishment of germline methylation marks at imprinted genes.

Authors:  Mita Chotalia; Sebastien A Smallwood; Nico Ruf; Claire Dawson; Diana Lucifero; Marga Frontera; Katherine James; Wendy Dean; Gavin Kelsey
Journal:  Genes Dev       Date:  2009-01-01       Impact factor: 11.361

8.  KDM1B is a histone H3K4 demethylase required to establish maternal genomic imprints.

Authors:  David N Ciccone; Hui Su; Sarah Hevi; Frédérique Gay; Hong Lei; Jeffrey Bajko; Guoliang Xu; En Li; Taiping Chen
Journal:  Nature       Date:  2009-09-02       Impact factor: 49.962

9.  A maternal-zygotic effect gene, Zfp57, maintains both maternal and paternal imprints.

Authors:  Xiajun Li; Mitsuteru Ito; Fen Zhou; Neil Youngson; Xiaopan Zuo; Philip Leder; Anne C Ferguson-Smith
Journal:  Dev Cell       Date:  2008-10       Impact factor: 12.270

10.  Formation of nucleoprotein filaments by mammalian DNA methyltransferase Dnmt3a in complex with regulator Dnmt3L.

Authors:  Renata Z Jurkowska; Nils Anspach; Claus Urbanke; Da Jia; Richard Reinhardt; Wolfgang Nellen; Xiaodong Cheng; Albert Jeltsch
Journal:  Nucleic Acids Res       Date:  2008-10-22       Impact factor: 16.971

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  53 in total

1.  Effects of endocrine disruptors on imprinted gene expression in the mouse embryo.

Authors:  Eun-Rim Kang; Khursheed Iqbal; Diana A Tran; Guillermo E Rivas; Purnima Singh; Gerd P Pfeifer; Piroska E Szabó
Journal:  Epigenetics       Date:  2011-07-01       Impact factor: 4.528

2.  Longitudinal personal DNA methylome dynamics in a human with a chronic condition.

Authors:  Rui Chen; Lin Xia; Kailing Tu; Meixue Duan; Kimberly Kukurba; Jennifer Li-Pook-Than; Dan Xie; Michael Snyder
Journal:  Nat Med       Date:  2018-11-05       Impact factor: 53.440

Review 3.  The curious chemical biology of cytosine: deamination, methylation, and oxidation as modulators of genomic potential.

Authors:  Christopher S Nabel; Sara A Manning; Rahul M Kohli
Journal:  ACS Chem Biol       Date:  2011-10-31       Impact factor: 5.100

Review 4.  Toward a more precise and informative nomenclature describing fetal and neonatal male germ cells in rodents.

Authors:  John R McCarrey
Journal:  Biol Reprod       Date:  2013-08-29       Impact factor: 4.285

5.  Non-germ Line Restoration of Genomic Imprinting for a Small Subset of Imprinted Genes in Ubiquitin-like PHD and RING Finger Domain-Containing 1 (Uhrf1) Null Mouse Embryonic Stem Cells.

Authors:  Shankang Qi; Zhiqiang Wang; Pishun Li; Qihan Wu; Tieliu Shi; Jiwen Li; Jiemin Wong
Journal:  J Biol Chem       Date:  2015-04-21       Impact factor: 5.157

6.  The origin of imprinting defects in Temple syndrome and comparison with other imprinting disorders.

Authors:  Jasmin Beygo; Claudia Mertel; Sabine Kaya; Gabriele Gillessen-Kaesbach; Thomas Eggermann; Bernhard Horsthemke; Karin Buiting
Journal:  Epigenetics       Date:  2018-09-19       Impact factor: 4.528

7.  Blocked transcription through KvDMR1 results in absence of methylation and gene silencing resembling Beckwith-Wiedemann syndrome.

Authors:  Vir B Singh; Sirinapa Sribenja; Kayla E Wilson; Kristopher M Attwood; Joanna C Hillman; Shilpa Pathak; Michael J Higgins
Journal:  Development       Date:  2017-04-20       Impact factor: 6.868

8.  The effect of parental allergy on childhood allergic diseases depends on the sex of the child.

Authors:  S Hasan Arshad; Wilfried Karmaus; Abid Raza; Ramesh J Kurukulaaratchy; Sharon M Matthews; John W Holloway; Alireza Sadeghnejad; Hongmei Zhang; Graham Roberts; Susan L Ewart
Journal:  J Allergy Clin Immunol       Date:  2012-05-18       Impact factor: 10.793

Review 9.  DLK1-DIO3 imprinted cluster in induced pluripotency: landscape in the mist.

Authors:  Leonidas Benetatos; George Vartholomatos; Eleftheria Hatzimichael
Journal:  Cell Mol Life Sci       Date:  2014-08-07       Impact factor: 9.261

Review 10.  The maternal to zygotic transition in mammals.

Authors:  Lei Li; Xukun Lu; Jurrien Dean
Journal:  Mol Aspects Med       Date:  2013-01-23
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