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Literature DB >> 21283118

RNA seeds nuclear bodies.

Abstract

The interior of the eukaryotic cell nucleus is populated by a multitude of microscopic domains termed nuclear bodies. Despite having attracted much attention, how these compartments form and are maintained remained elusive. Now, two live-cell imaging studies provide compelling evidence that nascent RNAs can act as transiently immobilized scaffolds that recruit specific nuclear body proteins.

Mesh：

Substances：
RNA, Nuclear

Year: 2011 PMID： 21283118 DOI： 10.1038/ncb0211-110

Source DB: PubMed Journal: Nat Cell Biol ISSN： 1465-7392 Impact factor: 28.824

14 in total

Review 1. To be or not to be in the nucleolus.

Authors: M Carmo-Fonseca; L Mendes-Soares; I Campos
Journal: Nat Cell Biol Date: 2000-06 Impact factor: 28.824

2. De novo formation of a subnuclear body.

Authors: Trish E Kaiser; Robert V Intine; Miroslav Dundr
Journal: Science Date: 2008-10-23 Impact factor: 47.728

3. MENepsilon/beta noncoding RNAs are essential for structural integrity of nuclear paraspeckles.

Authors: Yasnory T F Sasaki; Takashi Ideue; Miho Sano; Toutai Mituyama; Tetsuro Hirose
Journal: Proc Natl Acad Sci U S A Date: 2009-02-02 Impact factor: 11.205

4. An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles.

Authors: Christine M Clemson; John N Hutchinson; Sergio A Sara; Alexander W Ensminger; Archa H Fox; Andrew Chess; Jeanne B Lawrence
Journal: Mol Cell Date: 2009-02-12 Impact factor: 17.970

5. MEN epsilon/beta nuclear-retained non-coding RNAs are up-regulated upon muscle differentiation and are essential components of paraspeckles.

Authors: Hongjae Sunwoo; Marcel E Dinger; Jeremy E Wilusz; Paulo P Amaral; John S Mattick; David L Spector
Journal: Genome Res Date: 2008-12-22 Impact factor: 9.043

Review 6. Metabolism and regulation of canonical histone mRNAs: life without a poly(A) tail.

Authors: William F Marzluff; Eric J Wagner; Robert J Duronio
Journal: Nat Rev Genet Date: 2008-11 Impact factor: 53.242

7. Direct visualization of the co-transcriptional assembly of a nuclear body by noncoding RNAs.

Authors: Yuntao S Mao; Hongjae Sunwoo; Bin Zhang; David L Spector
Journal: Nat Cell Biol Date: 2010-12-19 Impact factor: 28.824

8. In vivo localization of DNA sequences and visualization of large-scale chromatin organization using lac operator/repressor recognition.

Authors: C C Robinett; A Straight; G Li; C Willhelm; G Sudlow; A Murray; A S Belmont
Journal: J Cell Biol Date: 1996-12 Impact factor: 10.539

9. Transcription of Satellite III non-coding RNAs is a general stress response in human cells.

Authors: Rut Valgardsdottir; Ilaria Chiodi; Manuela Giordano; Antonio Rossi; Silvia Bazzini; Claudia Ghigna; Silvano Riva; Giuseppe Biamonti
Journal: Nucleic Acids Res Date: 2007-11-26 Impact factor: 16.971

10. Actin-dependent intranuclear repositioning of an active gene locus in vivo.

Authors: Miroslav Dundr; Jason K Ospina; Myong-Hee Sung; Sam John; Madhvi Upender; Thomas Ried; Gordon L Hager; A Gregory Matera
Journal: J Cell Biol Date: 2007-12-10 Impact factor: 10.539

11 in total

1. Nucleolus-tethering system (NoTS).

Authors: Yin Liu; Yuda Fang
Journal: Nucleus Date: 2014 Jul-Aug Impact factor: 4.197

Review 2. Nuclear compartmentalization as a mechanism of quantitative control of gene expression.

Authors: Prashant Bhat; Drew Honson; Mitchell Guttman
Journal: Nat Rev Mol Cell Biol Date: 2021-08-02 Impact factor: 94.444

3. A sequence in the Drosophila H3-H4 Promoter triggers histone locus body assembly and biosynthesis of replication-coupled histone mRNAs.

Authors: Harmony R Salzler; Deirdre C Tatomer; Pamela Y Malek; Stephen L McDaniel; Anna N Orlando; William F Marzluff; Robert J Duronio
Journal: Dev Cell Date: 2013-03-25 Impact factor: 12.270

RNA seeds nuclear bodies.

Review 1. To be or not to be in the nucleolus.

2. De novo formation of a subnuclear body.

3. MENepsilon/beta noncoding RNAs are essential for structural integrity of nuclear paraspeckles.

4. An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles.

5. MEN epsilon/beta nuclear-retained non-coding RNAs are up-regulated upon muscle differentiation and are essential components of paraspeckles.

Review 6. Metabolism and regulation of canonical histone mRNAs: life without a poly(A) tail.

7. Direct visualization of the co-transcriptional assembly of a nuclear body by noncoding RNAs.

8. In vivo localization of DNA sequences and visualization of large-scale chromatin organization using lac operator/repressor recognition.

9. Transcription of Satellite III non-coding RNAs is a general stress response in human cells.

10. Actin-dependent intranuclear repositioning of an active gene locus in vivo.

1. Nucleolus-tethering system (NoTS).

Review 2. Nuclear compartmentalization as a mechanism of quantitative control of gene expression.

3. A sequence in the Drosophila H3-H4 Promoter triggers histone locus body assembly and biosynthesis of replication-coupled histone mRNAs.

Review 4. RNA in unexpected places: long non-coding RNA functions in diverse cellular contexts.

5. RNA polymerase II condensate formation and association with Cajal and histone locus bodies in living human cells.

Review 6. Paraspeckle nuclear bodies--useful uselessness?

7. The Role of Crowding Forces in Juxtaposing β-Globin Gene Domain Remote Regulatory Elements in Mouse Erythroid Cells.

Review 8. The role of chromosomal retention of noncoding RNA in meiosis.

9. Perturbation of chromatin structure globally affects localization and recruitment of splicing factors.

10. Chromosomally-retained RNA mediates homologous pairing.