Literature DB >> 21278756

Retinal dynamics underlie its switch from inverse agonist to agonist during rhodopsin activation.

Andrey V Struts1, Gilmar F J Salgado, Karina Martínez-Mayorga, Michael F Brown.   

Abstract

X-ray and magnetic resonance approaches, though central to studies of G protein-coupled receptor (GPCR)-mediated signaling, cannot address GPCR protein dynamics or plasticity. Here we show that solid-state (2)H NMR relaxation elucidates picosecond-to-nanosecond-timescale motions of the retinal ligand that influence larger-scale functional dynamics of rhodopsin in membranes. We propose a multiscale activation mechanism whereby retinal initiates collective helix fluctuations in the meta I-meta II equilibrium on the microsecond-to-millisecond timescale.

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Year:  2011        PMID: 21278756      PMCID: PMC5283944          DOI: 10.1038/nsmb.1982

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  19 in total

1.  Movement of retinal along the visual transduction path.

Authors:  B Borhan; M L Souto; H Imai; Y Shichida; K Nakanishi
Journal:  Science       Date:  2000-06-23       Impact factor: 47.728

2.  Conformational similarities in the beta-ionone ring region of the rhodopsin chromophore in its ground state and after photoactivation to the metarhodopsin-I intermediate.

Authors:  Paul J R Spooner; Jonathan M Sharples; Scott C Goodall; Henning Seedorf; Michiel A Verhoeven; Johan Lugtenburg; Petra H M Bovee-Geurts; Willem J DeGrip; Anthony Watts
Journal:  Biochemistry       Date:  2003-11-25       Impact factor: 3.162

3.  The retinal conformation and its environment in rhodopsin in light of a new 2.2 A crystal structure.

Authors:  Tetsuji Okada; Minoru Sugihara; Ana-Nicoleta Bondar; Marcus Elstner; Peter Entel; Volker Buss
Journal:  J Mol Biol       Date:  2004-09-10       Impact factor: 5.469

4.  Structural observation of the primary isomerization in vision with femtosecond-stimulated Raman.

Authors:  Philipp Kukura; David W McCamant; Sangwoon Yoon; Daniel B Wandschneider; Richard A Mathies
Journal:  Science       Date:  2005-11-11       Impact factor: 47.728

5.  Agonists and partial agonists of rhodopsin: retinal polyene methylation affects receptor activation.

Authors:  Reiner Vogel; Steffen Lüdeke; Friedrich Siebert; Thomas P Sakmar; Amiram Hirshfeld; Mordechai Sheves
Journal:  Biochemistry       Date:  2006-02-14       Impact factor: 3.162

Review 6.  Visual rhodopsin sees the light: structure and mechanism of G protein signaling.

Authors:  Kevin D Ridge; Krzysztof Palczewski
Journal:  J Biol Chem       Date:  2007-02-08       Impact factor: 5.157

7.  A unified model of protein dynamics.

Authors:  Hans Frauenfelder; Guo Chen; Joel Berendzen; Paul W Fenimore; Helén Jansson; Benjamin H McMahon; Izabela R Stroe; Jan Swenson; Robert D Young
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-27       Impact factor: 11.205

8.  Crystal structure of the ligand-free G-protein-coupled receptor opsin.

Authors:  Jung Hee Park; Patrick Scheerer; Klaus Peter Hofmann; Hui-Woog Choe; Oliver Peter Ernst
Journal:  Nature       Date:  2008-06-18       Impact factor: 49.962

Review 9.  Multiple switches in G protein-coupled receptor activation.

Authors:  Shivani Ahuja; Steven O Smith
Journal:  Trends Pharmacol Sci       Date:  2009-09-03       Impact factor: 14.819

Review 10.  New G-protein-coupled receptor crystal structures: insights and limitations.

Authors:  Brian Kobilka; Gebhard F X Schertler
Journal:  Trends Pharmacol Sci       Date:  2008-01-14       Impact factor: 14.819

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  35 in total

1.  Thermal hysteresis in the backbone and side-chain dynamics of the elastin mimetic peptide [VPGVG]3 revealed by 2H NMR.

Authors:  Xiang Ma; Cheng Sun; Jiaxin Huang; Gregory S Boutis
Journal:  J Phys Chem B       Date:  2011-12-20       Impact factor: 2.991

Review 2.  Chemistry and biology of vision.

Authors:  Krzysztof Palczewski
Journal:  J Biol Chem       Date:  2011-11-10       Impact factor: 5.157

Review 3.  The significance of G protein-coupled receptor crystallography for drug discovery.

Authors:  John A Salon; David T Lodowski; Krzysztof Palczewski
Journal:  Pharmacol Rev       Date:  2011-12       Impact factor: 25.468

Review 4.  Ensemble of G protein-coupled receptor active states.

Authors:  P S-H Park
Journal:  Curr Med Chem       Date:  2012       Impact factor: 4.530

Review 5.  Structural approaches to understanding retinal proteins needed for vision.

Authors:  Tivadar Orban; Beata Jastrzebska; Krzysztof Palczewski
Journal:  Curr Opin Cell Biol       Date:  2013-11-28       Impact factor: 8.382

6.  CONDENSED-MATTER SPECTROSCOPY SPECTRAL METHODS FOR STUDY OF THE G-PROTEIN-COUPLED RECEPTOR RHODOPSIN. II. MAGNETIC RESONANCE METHODS.

Authors:  A V Struts; A V Barmasov; M F Brown
Journal:  Opt Spectrosc       Date:  2016-04-06       Impact factor: 0.891

7.  SPECTRAL METHODS FOR STUDY OF THE G-PROTEIN-COUPLED RECEPTOR RHODOPSIN. I. VIBRATIONAL AND ELECTRONIC SPECTROSCOPY.

Authors:  A V Struts; A V Barmasov; M F Brown
Journal:  Opt Spectrosc       Date:  2015-05-27       Impact factor: 0.891

8.  Retinal ligand mobility explains internal hydration and reconciles active rhodopsin structures.

Authors:  Nicholas Leioatts; Blake Mertz; Karina Martínez-Mayorga; Tod D Romo; Michael C Pitman; Scott E Feller; Alan Grossfield; Michael F Brown
Journal:  Biochemistry       Date:  2014-01-08       Impact factor: 3.162

9.  Single-molecule observation of the ligand-induced population shift of rhodopsin, a G-protein-coupled receptor.

Authors:  Ryo Maeda; Michio Hiroshima; Takahiro Yamashita; Akimori Wada; Shoko Nishimura; Yasushi Sako; Yoshinori Shichida; Yasushi Imamoto
Journal:  Biophys J       Date:  2014-02-18       Impact factor: 4.033

Review 10.  G protein-coupled receptors--recent advances.

Authors:  Dorota Latek; Anna Modzelewska; Bartosz Trzaskowski; Krzysztof Palczewski; Sławomir Filipek
Journal:  Acta Biochim Pol       Date:  2012-12-18       Impact factor: 2.149

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