Literature DB >> 28260816

CONDENSED-MATTER SPECTROSCOPY SPECTRAL METHODS FOR STUDY OF THE G-PROTEIN-COUPLED RECEPTOR RHODOPSIN. II. MAGNETIC RESONANCE METHODS.

A V Struts1, A V Barmasov2, M F Brown3.   

Abstract

This article continues our review of spectroscopic studies of G-protein-coupled receptors. Magnetic resonance methods including electron paramagnetic resonance (EPR) and nuclear magnetic resonance (NMR) provide specific structural and dynamical data for the protein in conjunction with optical methods (vibrational, electronic spectroscopy) as discussed in the accompanying article. An additional advantage is the opportunity to explore the receptor proteins in the natural membrane lipid environment. Solid-state 2H and 13C NMR methods yield information about the both local structure and dynamics of the cofactor bound to the protein and its light induced changes. Complementary site-directed spin labeling studies monitor the structural alterations over larger distances and correspondingly longer time scales. A multi-scale reaction mechanism describes how local changes of the retinal cofactor unlock the receptor to initiate large-scale conformational changes of rhodopsin. Activation of the G-protein-coupled receptor involves an ensemble of conformational substates within the rhodopsin manifold that characterize the dynamically active receptor.

Entities:  

Year:  2016        PMID: 28260816      PMCID: PMC5334789          DOI: 10.1134/S0030400X16010197

Source DB:  PubMed          Journal:  Opt Spectrosc        ISSN: 0030-400X            Impact factor:   0.891


  25 in total

Review 1.  Advances in determination of a high-resolution three-dimensional structure of rhodopsin, a model of G-protein-coupled receptors (GPCRs).

Authors:  D C Teller; T Okada; C A Behnke; K Palczewski; R E Stenkamp
Journal:  Biochemistry       Date:  2001-07-03       Impact factor: 3.162

2.  Conformational similarities in the beta-ionone ring region of the rhodopsin chromophore in its ground state and after photoactivation to the metarhodopsin-I intermediate.

Authors:  Paul J R Spooner; Jonathan M Sharples; Scott C Goodall; Henning Seedorf; Michiel A Verhoeven; Johan Lugtenburg; Petra H M Bovee-Geurts; Willem J DeGrip; Anthony Watts
Journal:  Biochemistry       Date:  2003-11-25       Impact factor: 3.162

3.  The retinal conformation and its environment in rhodopsin in light of a new 2.2 A crystal structure.

Authors:  Tetsuji Okada; Minoru Sugihara; Ana-Nicoleta Bondar; Marcus Elstner; Peter Entel; Volker Buss
Journal:  J Mol Biol       Date:  2004-09-10       Impact factor: 5.469

4.  Crystal structure of metarhodopsin II.

Authors:  Hui-Woog Choe; Yong Ju Kim; Jung Hee Park; Takefumi Morizumi; Emil F Pai; Norbert Krauss; Klaus Peter Hofmann; Patrick Scheerer; Oliver P Ernst
Journal:  Nature       Date:  2011-03-09       Impact factor: 49.962

5.  Selective interface detection: mapping binding site contacts in membrane proteins by NMR spectroscopy.

Authors:  Suzanne R Kiihne; Alain F L Creemers; Willem J de Grip; Petra H M Bovee-Geurts; Johan Lugtenburg; Huub J M de Groot
Journal:  J Am Chem Soc       Date:  2005-04-27       Impact factor: 15.419

6.  Two protonation switches control rhodopsin activation in membranes.

Authors:  Mohana Mahalingam; Karina Martínez-Mayorga; Michael F Brown; Reiner Vogel
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-07       Impact factor: 11.205

7.  The dynamic process of β(2)-adrenergic receptor activation.

Authors:  Rie Nygaard; Yaozhong Zou; Ron O Dror; Thomas J Mildorf; Daniel H Arlow; Aashish Manglik; Albert C Pan; Corey W Liu; Juan José Fung; Michael P Bokoch; Foon Sun Thian; Tong Sun Kobilka; David E Shaw; Luciano Mueller; R Scott Prosser; Brian K Kobilka
Journal:  Cell       Date:  2013-01-31       Impact factor: 41.582

8.  Deuterium NMR structure of retinal in the ground state of rhodopsin.

Authors:  Gilmar F J Salgado; Andrey V Struts; Katsunori Tanaka; Naoko Fujioka; Koji Nakanishi; Michael F Brown
Journal:  Biochemistry       Date:  2004-10-12       Impact factor: 3.162

9.  Stabilized G protein binding site in the structure of constitutively active metarhodopsin-II.

Authors:  Xavier Deupi; Patricia Edwards; Ankita Singhal; Benjamin Nickle; Daniel Oprian; Gebhard Schertler; Jörg Standfuss
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-23       Impact factor: 11.205

10.  Structure of the chemokine receptor CXCR1 in phospholipid bilayers.

Authors:  Sang Ho Park; Bibhuti B Das; Fabio Casagrande; Ye Tian; Henry J Nothnagel; Mignon Chu; Hans Kiefer; Klaus Maier; Anna A De Angelis; Francesca M Marassi; Stanley J Opella
Journal:  Nature       Date:  2012-10-21       Impact factor: 49.962

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