Literature DB >> 21278124

Regulation and flexibility of genomic imprinting during seed development.

Michael T Raissig1, Célia Baroux, Ueli Grossniklaus.   

Abstract

Genomic imprinting results in monoallelic gene expression in a parent-of-origin-dependent manner. It is achieved by the differential epigenetic marking of parental alleles. Over the past decade, studies in the model systems Arabidopsis thaliana and maize (Zea mays) have shown a strong correlation between silent or active states with epigenetic marks, such as DNA methylation and histone modifications, but the nature of the primary imprint has not been clearly established for all imprinted genes. Phenotypes and expression patterns of imprinted genes have fueled the perception that genomic imprinting is specific to the endosperm, a seed tissue that does not contribute to the next generation. However, several lines of evidence suggest a potential role for imprinting in the embryo, raising questions as to how imprints are erased and reset from one generation to the next. Imprinting regulation in flowering plants shows striking similarities, but also some important differences, compared with the mechanisms of imprinting described in mammals. For example, some imprinted genes are involved in seed growth and viability in plants, which is similar in mammals, where imprinted gene regulation is essential for embryonic development. However, it seems to be more flexible in plants, as imprinting requirements can be bypassed to allow the development of clonal offspring in apomicts.

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Year:  2011        PMID: 21278124      PMCID: PMC3051244          DOI: 10.1105/tpc.110.081018

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  99 in total

Review 1.  Apomixis: a developmental perspective.

Authors:  Anna M Koltunow; Ueli Grossniklaus
Journal:  Annu Rev Plant Biol       Date:  2003       Impact factor: 26.379

Review 2.  Imprinting and seed development.

Authors:  Mary Gehring; Yeonhee Choi; Robert L Fischer
Journal:  Plant Cell       Date:  2004-03-09       Impact factor: 11.277

3.  Dependence of the R-mottled aleurone phenotype in maize on mode of sexual transmission.

Authors:  J L Kermicle
Journal:  Genetics       Date:  1970-09       Impact factor: 4.562

4.  Positive darwinian selection at the imprinted MEDEA locus in plants.

Authors:  Charles Spillane; Karl J Schmid; Sylvia Laoueillé-Duprat; Stéphane Pien; Juan-Miguel Escobar-Restrepo; Célia Baroux; Valeria Gagliardini; Damian R Page; Kenneth H Wolfe; Ueli Grossniklaus
Journal:  Nature       Date:  2007-07-19       Impact factor: 49.962

Review 5.  Gamete-specific epigenetic mechanisms shape genomic imprinting.

Authors:  Pauline Emilie Jullien; Frédéric Berger
Journal:  Curr Opin Plant Biol       Date:  2009-08-24       Impact factor: 7.834

6.  Arabidopsis female gametophyte gene expression map reveals similarities between plant and animal gametes.

Authors:  Samuel E Wuest; Kitty Vijverberg; Anja Schmidt; Manuel Weiss; Jacqueline Gheyselinck; Miriam Lohr; Frank Wellmer; Jörg Rahnenführer; Christian von Mering; Ueli Grossniklaus
Journal:  Curr Biol       Date:  2010-03-11       Impact factor: 10.834

7.  Plant formin AtFH5 is an evolutionarily conserved actin nucleator involved in cytokinesis.

Authors:  Mathieu Ingouff; Jonathan N Fitz Gerald; Christophe Guérin; Hélène Robert; Mikael Blom Sørensen; Daniel Van Damme; Danny Geelen; Laurent Blanchoin; Frédéric Berger
Journal:  Nat Cell Biol       Date:  2005-03-13       Impact factor: 28.824

8.  The mouse insulin-like growth factor type-2 receptor is imprinted and closely linked to the Tme locus.

Authors:  D P Barlow; R Stöger; B G Herrmann; K Saito; N Schweifer
Journal:  Nature       Date:  1991-01-03       Impact factor: 49.962

9.  Duplicated fie genes in maize: expression pattern and imprinting suggest distinct functions.

Authors:  Olga N Danilevskaya; Pedro Hermon; Sabine Hantke; Michael G Muszynski; Krishna Kollipara; Evgueni V Ananiev
Journal:  Plant Cell       Date:  2003-02       Impact factor: 11.277

10.  Imprinting of the polycomb group gene MEDEA serves as a ploidy sensor in Arabidopsis.

Authors:  Aleksandra Erilova; Lynette Brownfield; Vivien Exner; Marisa Rosa; David Twell; Ortrun Mittelsten Scheid; Lars Hennig; Claudia Köhler
Journal:  PLoS Genet       Date:  2009-09-25       Impact factor: 5.917

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  57 in total

1.  Extensive, clustered parental imprinting of protein-coding and noncoding RNAs in developing maize endosperm.

Authors:  Mei Zhang; Hainan Zhao; Shaojun Xie; Jian Chen; Yuanyuan Xu; Keke Wang; Haiming Zhao; Haiying Guan; Xiaojiao Hu; Yinping Jiao; Weibin Song; Jinsheng Lai
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-23       Impact factor: 11.205

2.  The female gametophyte.

Authors:  Gary N Drews; Anna M G Koltunow
Journal:  Arabidopsis Book       Date:  2011-12-26

Review 3.  Function of MYB domain transcription factors in abiotic stress and epigenetic control of stress response in plant genome.

Authors:  Sujit Roy
Journal:  Plant Signal Behav       Date:  2016

4.  Regulation of Parent-of-Origin Allelic Expression in the Endosperm.

Authors:  Karina S Hornslien; Jason R Miller; Paul E Grini
Journal:  Plant Physiol       Date:  2019-05-07       Impact factor: 8.340

Review 5.  Epigenetic regulation in plants.

Authors:  Craig S Pikaard; Ortrun Mittelsten Scheid
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-12-01       Impact factor: 10.005

6.  Selection for Improved Energy Use Efficiency and Drought Tolerance in Canola Results in Distinct Transcriptome and Epigenome Changes.

Authors:  Aurine Verkest; Marina Byzova; Cindy Martens; Patrick Willems; Tom Verwulgen; Bram Slabbinck; Debbie Rombaut; Jan Van de Velde; Klaas Vandepoele; Evi Standaert; Marrit Peeters; Mieke Van Lijsebettens; Frank Van Breusegem; Marc De Block
Journal:  Plant Physiol       Date:  2015-06-16       Impact factor: 8.340

Review 7.  Transcriptional silencing by polycomb-group proteins.

Authors:  Ueli Grossniklaus; Renato Paro
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-11-03       Impact factor: 10.005

8.  Comprehensive developmental profiles of gene activity in regions and subregions of the Arabidopsis seed.

Authors:  Mark F Belmonte; Ryan C Kirkbride; Sandra L Stone; Julie M Pelletier; Anhthu Q Bui; Edward C Yeung; Meryl Hashimoto; Jiong Fei; Corey M Harada; Matthew D Munoz; Brandon H Le; Gary N Drews; Siobhan M Brady; Robert B Goldberg; John J Harada
Journal:  Proc Natl Acad Sci U S A       Date:  2013-01-14       Impact factor: 11.205

9.  Biogenesis of protein bodies during legumin accumulation in developing olive (Olea europaea L.) seed.

Authors:  Jose C Jimenez-Lopez; Agnieszka Zienkiewicz; Krzysztof Zienkiewicz; Juan D Alché; Maria I Rodríguez-García
Journal:  Protoplasma       Date:  2015-05-21       Impact factor: 3.356

10.  The Armadillo repeat gene ZAK IXIK promotes Arabidopsis early embryo and endosperm development through a distinctive gametophytic maternal effect.

Authors:  Quy A Ngo; Celia Baroux; Daniela Guthörl; Peter Mozerov; Margaret A Collinge; Venkatesan Sundaresan; Ueli Grossniklaus
Journal:  Plant Cell       Date:  2012-10-12       Impact factor: 11.277

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