Literature DB >> 21275418

Synthesis, photophysical characterization, and enzymatic incorporation of a microenvironment-sensitive fluorescent uridine analog.

Maroti G Pawar1, Seergazhi G Srivatsan.   

Abstract

The synthesis of a microenvironment-sensitive base-modified fluorescent ribonucleoside analog based on a 5-(benzo[b]thiophen-2-yl)pyrimidine core, enzymatic incorporation of its corresponding triphosphate into RNA oligonucleotides, and photophysical characterization of fluorescently modified oligoribonucleotides are described.

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Year:  2011        PMID： 21275418     DOI： 10.1021/ol103147t

Source DB:  PubMed          Journal:  Org Lett        ISSN： 1523-7052            Impact factor:   6.005


  13 in total

Review 1.  Novel modifications in RNA.

Authors:  Kelly Phelps; Alexi Morris; Peter A Beal
Journal:  ACS Chem Biol       Date:  2011-12-23       Impact factor: 5.100

2.  Posttranscriptional Suzuki-Miyaura Cross-Coupling Yields Labeled RNA for Conformational Analysis and Imaging.

Authors:  Manisha B Walunj; Seergazhi G Srivatsan
Journal:  Methods Mol Biol       Date:  2020

Review 3.  Total RNA Synthesis and its Covalent Labeling Innovation.

Authors:  Hongling Zhou; Yuanyuan Li; Youfang Gan; Rui Wang
Journal:  Top Curr Chem (Cham)       Date:  2022-02-26

4.  Heterocycle-modified 2'-Deoxyguanosine Nucleolipid Analogs Stabilize Guanosine Gels and Self-assemble to Form Green Fluorescent Gels.

Authors:  Manisha B Walunj; Seergazhi G Srivatsan
Journal:  Chem Asian J       Date:  2021-12-16

5.  Bioorthogonal chemistry-based RNA labeling technologies: evolution and current state.

Authors:  Jerrin Thomas George; Seergazhi G Srivatsan
Journal:  Chem Commun (Camb)       Date:  2020-10-07       Impact factor: 6.222

6.  Synthesis and Study the Effect of Donor-Acceptor Substituent on Fluorescence Behavior of Thieno[3, 2-c]pyridine Derivatives.

Authors:  Raghunath B Toche; Sunil N Chavan
Journal:  J Fluoresc       Date:  2013-10-27       Impact factor: 2.217

7.  Enzymatic incorporation of an azide-modified UTP analog into oligoribonucleotides for post-transcriptional chemical functionalization.

Authors:  Harita Rao; Arun A Tanpure; Anupam A Sawant; Seergazhi G Srivatsan
Journal:  Nat Protoc       Date:  2012-05-10       Impact factor: 13.491

8.  Isomorphic emissive GTP surrogate facilitates initiation and elongation of in vitro transcription reactions.

Authors:  Lisa S McCoy; Dongwon Shin; Yitzhak Tor
Journal:  J Am Chem Soc       Date:  2014-10-17       Impact factor: 15.419

9.  Fluorescent RNA cytosine analogue - an internal probe for detailed structure and dynamics investigations.

Authors:  Anders Foller Füchtbauer; Søren Preus; Karl Börjesson; Scott A McPhee; David M J Lilley; L Marcus Wilhelmsson
Journal:  Sci Rep       Date:  2017-05-24       Impact factor: 4.379

10.  Synthesis and photophysical study of 2'-deoxyuridines labeled with fluorene derivatives.

Authors:  Hyun Yi Cho; Sang Keun Woo; Gil Tae Hwang
Journal:  Molecules       Date:  2012-10-15       Impact factor: 4.411
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