Literature DB >> 21271714

Simulation of the lo-ld phase boundary in DSPC/DOPC/cholesterol ternary mixtures using pairwise interactions.

Jian Dai1, Mohammad Alwarawrah, Md Rejwan Ali, Gerald W Feigenson, Juyang Huang.   

Abstract

Recently, a number of ternary phase diagrams of lipid mixtures have been constructed using various experimental techniques with a common goal of understanding the nature of lipid domains. An accurate experimental phase diagram can provide rich thermodynamic information and can also be used to extract molecular interactions using computer simulation. In this study, the liquid-ordered and liquid-disordered (l(o)-l(d)) phase boundary of DSPC/DOPC/Cholesterol ternary mixtures is simulated in a lattice model using pairwise interactions. The block composition distribution (BCD) technique was used to locate accurately the compositions of coexisting phases and thermodynamics tie-lines in the two-phase region, and the Binder ratio method was used to determine the phase boundary in the critical region. In simulations performed along a thermodynamic tie-line, the BCD method correctly samples the compositions as well as the relative amounts of coexisting phases, which is in excellent agreement with the lever rule. A "best-fit" phase boundary was obtained that has a top boundary closely resembling the experimental boundary. However, the width of the simulated two-phase region is significantly wider than the experimental one. The results show that pairwise interactions alone are not sufficient to describe the complexity of molecular interactions in the ternary lipid mixtures; more complex forms of interactions, possibly multibody interaction or domain interfacial energy, should be included in the simulation.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21271714      PMCID: PMC3057374          DOI: 10.1021/jp110243v

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  16 in total

1.  On the inner structure and topology of clusters in two-component lipid bilayers. Comparison of monomer and dimer Ising models.

Authors:  István P Sugár
Journal:  J Phys Chem B       Date:  2008-08-26       Impact factor: 2.991

2.  A microscopic interaction model of maximum solubility of cholesterol in lipid bilayers.

Authors:  J Huang; G W Feigenson
Journal:  Biophys J       Date:  1999-04       Impact factor: 4.033

3.  Monte Carlo simulation of two-component bilayers: DMPC/DSPC mixtures.

Authors:  I P Sugár; T E Thompson; R L Biltonen
Journal:  Biophys J       Date:  1999-04       Impact factor: 4.033

4.  Assess the nature of cholesterol-lipid interactions through the chemical potential of cholesterol in phosphatidylcholine bilayers.

Authors:  Md Rejwan Ali; Kwan Hon Cheng; Juyang Huang
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-19       Impact factor: 11.205

5.  Closed-loop miscibility gap and quantitative tie-lines in ternary membranes containing diphytanoyl PC.

Authors:  Sarah L Veatch; Klaus Gawrisch; Sarah L Keller
Journal:  Biophys J       Date:  2006-03-24       Impact factor: 4.033

6.  Crosslinking a lipid raft component triggers liquid ordered-liquid disordered phase separation in model plasma membranes.

Authors:  A T Hammond; F A Heberle; T Baumgart; D Holowka; B Baird; G W Feigenson
Journal:  Proc Natl Acad Sci U S A       Date:  2005-04-25       Impact factor: 11.205

7.  Phase studies of model biomembranes: complex behavior of DSPC/DOPC/cholesterol.

Authors:  Jiang Zhao; Jing Wu; Frederick A Heberle; Thalia T Mills; Paul Klawitter; Grace Huang; Greg Costanza; Gerald W Feigenson
Journal:  Biochim Biophys Acta       Date:  2007-07-25

8.  Simulation of the gel-fluid transition in a membrane composed of lipids with two connected acyl chains: application of a dimer-move step.

Authors:  R Jerala; P F Almeida; R L Biltonen
Journal:  Biophys J       Date:  1996-08       Impact factor: 4.033

9.  Phenomenological model and phase behavior of saturated and unsaturated lipids and cholesterol.

Authors:  G Garbès Putzel; M Schick
Journal:  Biophys J       Date:  2008-08-15       Impact factor: 4.033

10.  Why are lipid rafts not observed in vivo?

Authors:  Arun Yethiraj; James C Weisshaar
Journal:  Biophys J       Date:  2007-07-27       Impact factor: 4.033

View more
  7 in total

1.  Pictures of the Substructure of Liquid-Ordered Domains.

Authors:  Gerald W Feigenson
Journal:  Biophys J       Date:  2015-09-01       Impact factor: 4.033

2.  Monte Carlo simulation of protein-induced lipid demixing in a membrane with interactions derived from experiment.

Authors:  Paulo F Almeida; Alexis Best; Anne Hinderliter
Journal:  Biophys J       Date:  2011-10-19       Impact factor: 4.033

3.  The Phase Behavior and Organization of Sphingomyelin/Cholesterol Membranes: A Deuterium NMR Study.

Authors:  Amir Keyvanloo; Mehran Shaghaghi; Martin J Zuckermann; Jenifer L Thewalt
Journal:  Biophys J       Date:  2018-03-27       Impact factor: 4.033

4.  The Chemical Potential of Plasma Membrane Cholesterol: Implications for Cell Biology.

Authors:  Artem G Ayuyan; Fredric S Cohen
Journal:  Biophys J       Date:  2018-02-27       Impact factor: 4.033

Review 5.  Barcoding Biological Reactions with DNA-Functionalized Vesicles.

Authors:  Justin A Peruzzi; Miranda L Jacobs; Timothy Q Vu; Kenneth S Wang; Neha P Kamat
Journal:  Angew Chem Int Ed Engl       Date:  2019-10-31       Impact factor: 15.336

6.  Functional lipid pairs as building blocks of phase-separated membranes.

Authors:  Dmytro Soloviov; Yong Q Cai; Dima Bolmatov; Alexey Suvorov; Kirill Zhernenkov; Dmitry Zav'yalov; Alexey Bosak; Hiroshi Uchiyama; Mikhail Zhernenkov
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-18       Impact factor: 11.205

7.  Low-flux scanning electron diffraction reveals substructures inside the ordered membrane domain.

Authors:  Masanao Kinoshita; Shimpei Yamaguchi; Nobuaki Matsumori
Journal:  Sci Rep       Date:  2020-12-21       Impact factor: 4.379

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.