Warning: Undefined array key "mm" in /www/wwwroot/www.ai-bt.com/si.php on line 10 Deprecated: trim(): Passing null to parameter #1 ($string) of type string is deprecated in /www/wwwroot/www.ai-bt.com/si.php on line 10 Oligonucleotide labeling using BODIPY phosphoramidite.

Literature DB >> 21259159

Oligonucleotide labeling using BODIPY phosphoramidite.

Abstract

4,4-Difluoro-4-bora-3a,4a-diaza-s-indacene (BODIPY) derivatives were prepared and their photochemical properties were characterized. One such analogue, 4,4-difluoro-4-bora-1,3,5,7-tetramethyl-8-(5-hydroxypentyl)-3a,4a-diaza-s-indacene was transformed into the corresponding phosphoramidite and incorporated into oligodeoxyribonucleotides as a fluorescent reporter group.

Entities: Chemical

Mesh：

Substances：

Year: 2011 PMID： 21259159 DOI： 10.1080/15257770.2010.536798

Source DB: PubMed Journal: Nucleosides Nucleotides Nucleic Acids ISSN： 1525-7770 Impact factor: 1.381

Keyword Cloud
Cited

7 in total

Review 1. Covalent labeling of nucleic acids.

Authors: Nils Klöcker; Florian P Weissenboeck; Andrea Rentmeister
Journal: Chem Soc Rev Date: 2020-10-21 Impact factor: 54.564

2. BODIPY-based fluorescent liposomes with sesquiterpene lactone trilobolide.

Authors: Ludmila Škorpilová; Silvie Rimpelová; Michal Jurášek; Miloš Buděšínský; Jana Lokajová; Roman Effenberg; Petr Slepička; Tomáš Ruml; Eva Kmoníčková; Pavel B Drašar; Zdeněk Wimmer
Journal: Beilstein J Org Chem Date: 2017-07-04 Impact factor: 2.883

3. Crystal structure and solvent-dependent behaviours of 3-amino-1,6-diethyl-2,5,7-trimethyl-4,4-di-phenyl-3a,4a-di-aza-4-bora-s-indacene.

Authors: Lijing Yang; Brett Drew; Ravi Shekar Yalagala; Rameez Chaviwala; Razvan Simionescu; Alan J Lough; Hongbin Yan
Journal: Acta Crystallogr E Crystallogr Commun Date: 2017-02-14

4. Further investigation on the nitration of BODIPY with cupric nitrate: crystal structures of 4,4-di-fluoro-1,3,5,7,8-penta-methyl-2-nitro-4-bora-3a,4a-di-aza-s-indacene, 4,4-di-fluoro-3-nitro-8-phenyl-4-bora-3a,4a-di-aza-s-indacene, and 3-chloro-6-ethyl-5,7,8-trimethyl-2-nitro-4,4-diphenyl-4-bora-3a,4a-di-aza-s-indacene.

Authors: Dhruval J Joshi; Meesook Jun; Lijing Yang; Alan J Lough; Hongbin Yan
Journal: Acta Crystallogr E Crystallogr Commun Date: 2018-01-09

Oligonucleotide labeling using BODIPY phosphoramidite.

Review 1. Covalent labeling of nucleic acids.

2. BODIPY-based fluorescent liposomes with sesquiterpene lactone trilobolide.

3. Crystal structure and solvent-dependent behaviours of 3-amino-1,6-diethyl-2,5,7-trimethyl-4,4-di-phenyl-3a,4a-di-aza-4-bora-s-indacene.

5. A novel class of polymeric fluorescent dyes assembled using a DNA synthesizer.

6. Green-Light Activatable BODIPY and Coumarin 5'-Caps for Oligonucleotide Photocaging.

7. A 5'-BODIPY End-label for Monitoring DNA Duplex-Quadruplex Exchange.