Literature DB >> 21257766

Genome sequence of Lactobacillus farciminis KCTC 3681.

Seong-Hyeuk Nam1, Sang-Haeng Choi, Aram Kang, Dong-Wook Kim, Ryong Nam Kim, Aeri Kim, Dae-Soo Kim, Hong-Seog Park.   

Abstract

Lactobacillus farciminis is one of the most prevalent lactic acid bacterial species present during the manufacturing process of kimchi, the best-known traditional Korean dish. Here, we present the draft genome sequence of the type strain Lactobacillus farciminis KCTC 3681 (2,498,309 bp, with a G+C content of 36.4%), which consists of 5 scaffolds.

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Year:  2011        PMID： 21257766      PMCID： PMC3067648          DOI： 10.1128/JB.00003-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  12 in total

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2.  Development and evaluation of genome-probing microarrays for monitoring lactic acid bacteria.

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Journal:  Appl Environ Microbiol       Date:  2005-12       Impact factor: 4.792

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Journal:  Food Addit Contam       Date:  2005-11

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Authors:  Arthur L Delcher; Kirsten A Bratke; Edwin C Powers; Steven L Salzberg
Journal:  Bioinformatics       Date:  2007-01-19       Impact factor: 6.937

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Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

6.  A rapid alkaline extraction procedure for screening recombinant plasmid DNA.

Authors:  H C Birnboim; J Doly
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7.  Whole-genome random sequencing and assembly of Haemophilus influenzae Rd.

Authors:  R D Fleischmann; M D Adams; O White; R A Clayton; E F Kirkness; A R Kerlavage; C J Bult; J F Tomb; B A Dougherty; J M Merrick
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8.  RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

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Journal:  BMC Bioinformatics       Date:  2003-09-11       Impact factor: 3.169
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  3 in total

1.  A cost-effective and universal strategy for complete prokaryotic genomic sequencing proposed by computer simulation.

Authors:  Jingwei Jiang; Jun Li; Hoi Shan Kwan; Chun Hang Au; Patrick Tik Wan Law; Lei Li; Kai Man Kam; Julia Mei Lun Ling; Frederick C Leung
Journal:  BMC Res Notes       Date:  2012-01-31

2.  Characterization of Feruloyl Esterases Produced by the Four Lactobacillus Species: L. amylovorus, L. acidophilus, L. farciminis and L. fermentum, Isolated from Ensiled Corn Stover.

Authors:  Zhenshang Xu; Huiying He; Susu Zhang; Tingting Guo; Jian Kong
Journal:  Front Microbiol       Date:  2017-06-02       Impact factor: 5.640

3.  Genome Sequence of Rough and Smooth Variants of Pleomorphic Strain Lactobacillus farciminis CNCM-I-3699.

Authors:  R Tareb; M Bernardeau; J P Vernoux
Journal:  Genome Announc       Date:  2015-09-17
  3 in total

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