Literature DB >> 21248043

Rotavirus VP2 core shell regions critical for viral polymerase activation.

Sarah M McDonald1, John T Patton.   

Abstract

The innermost VP2 core shell of the triple-layered, icosahedral rotavirus particle surrounds the viral genome and RNA processing enzymes, including the RNA-dependent RNA polymerase (VP1). In addition to anchoring VP1 within the core, VP2 is also an essential cofactor that triggers the polymerase to initiate double-stranded RNA (dsRNA) synthesis using packaged plus-strand RNA templates. The VP2 requirement effectively couples packaging with genome replication and ensures that VP1 makes dsRNA only within an assembling previrion particle. However, the mechanism by which the rotavirus core shell protein activates the viral polymerase remains very poorly understood. In the current study, we sought to elucidate VP2 regions critical for VP1-mediated in vitro dsRNA synthesis. By comparing the functions of proteins from several different rotaviruses, we found that polymerase activation by the core shell protein is specific. Through truncation and chimera mutagenesis, we demonstrate that the VP2 amino terminus, which forms a decameric, internal hub underneath each 5-fold axis, plays an important but nonspecific role in VP1 activation. Our results indicate that the VP2 residues correlating with polymerase activation specificity are located on the inner face of the core shell, distinct from the amino terminus. Based on these findings, we predict that several regions of VP2 engage the polymerase during the concerted processes of rotavirus core assembly and genome replication.

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Year:  2011        PMID: 21248043      PMCID: PMC3067889          DOI: 10.1128/JVI.02360-10

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  25 in total

1.  RNA synthesis in a cage--structural studies of reovirus polymerase lambda3.

Authors:  Yizhi Tao; Diane L Farsetta; Max L Nibert; Stephen C Harrison
Journal:  Cell       Date:  2002-11-27       Impact factor: 41.582

2.  Template recognition and formation of initiation complexes by the replicase of a segmented double-stranded RNA virus.

Authors:  M Alejandra Tortorici; Teresa J Broering; Max L Nibert; John T Patton
Journal:  J Biol Chem       Date:  2003-06-03       Impact factor: 5.157

3.  UCSF Chimera--a visualization system for exploratory research and analysis.

Authors:  Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

Review 4.  Emerging themes in rotavirus cell entry, genome organization, transcription and replication.

Authors:  Hariharan Jayaram; M K Estes; B V Venkataram Prasad
Journal:  Virus Res       Date:  2004-04       Impact factor: 3.303

5.  The dsRNA viruses.

Authors:  Peter Mertens
Journal:  Virus Res       Date:  2004-04       Impact factor: 3.303

6.  Rotavirus RNA replication: single-stranded RNA extends from the replicase particle.

Authors:  J T Patton; C O Gallegos
Journal:  J Gen Virol       Date:  1990-05       Impact factor: 3.891

7.  Characterization of rotavirus replication intermediates: a model for the assembly of single-shelled particles.

Authors:  C O Gallegos; J T Patton
Journal:  Virology       Date:  1989-10       Impact factor: 3.616

8.  Characterization of rotavirus VP2 particles.

Authors:  C Q Zeng; M Labbé; J Cohen; B V Prasad; D Chen; R F Ramig; M K Estes
Journal:  Virology       Date:  1994-05-15       Impact factor: 3.616

9.  Complete genome sequence analysis of candidate human rotavirus vaccine strains RV3 and 116E.

Authors:  Christine M Rippinger; John T Patton; Sarah M McDonald
Journal:  Virology       Date:  2010-06-26       Impact factor: 3.616

10.  Expression of rotavirus VP2 produces empty corelike particles.

Authors:  M Labbé; A Charpilienne; S E Crawford; M K Estes; J Cohen
Journal:  J Virol       Date:  1991-06       Impact factor: 5.103

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  29 in total

1.  Mutational analysis of residues involved in nucleotide and divalent cation stabilization in the rotavirus RNA-dependent RNA polymerase catalytic pocket.

Authors:  Kristen M Ogden; Harish N Ramanathan; John T Patton
Journal:  Virology       Date:  2012-06-02       Impact factor: 3.616

2.  Infectious Bursal Disease Virus VP3 Upregulates VP1-Mediated RNA-Dependent RNA Replication.

Authors:  Diego Ferrero; Damià Garriga; Aitor Navarro; José F Rodríguez; Núria Verdaguer
Journal:  J Virol       Date:  2015-08-26       Impact factor: 5.103

Review 3.  Interactions among capsid proteins orchestrate rotavirus particle functions.

Authors:  Shane D Trask; Kristen M Ogden; John T Patton
Journal:  Curr Opin Virol       Date:  2012-05-16       Impact factor: 7.090

4.  A Temperature-Sensitive Lesion in the N-Terminal Domain of the Rotavirus Polymerase Affects Its Intracellular Localization and Enzymatic Activity.

Authors:  Allison O McKell; Leslie E W LaConte; Sarah M McDonald
Journal:  J Virol       Date:  2017-03-13       Impact factor: 5.103

Review 5.  Structural insights into the coupling of virion assembly and rotavirus replication.

Authors:  Shane D Trask; Sarah M McDonald; John T Patton
Journal:  Nat Rev Microbiol       Date:  2012-01-23       Impact factor: 60.633

6.  Probing the sites of interactions of rotaviral proteins involved in replication.

Authors:  Maria Viskovska; Ramakrishnan Anish; Liya Hu; Dar-Chone Chow; Amy M Hurwitz; Nicholas G Brown; Timothy Palzkill; Mary K Estes; B V Venkataram Prasad
Journal:  J Virol       Date:  2014-08-27       Impact factor: 5.103

7.  In Vitro Double-Stranded RNA Synthesis by Rotavirus Polymerase Mutants with Lesions at Core Shell Contact Sites.

Authors:  Courtney L Steger; Mackenzie L Brown; Owen M Sullivan; Crystal E Boudreaux; Courtney A Cohen; Leslie E W LaConte; Sarah M McDonald
Journal:  J Virol       Date:  2019-09-30       Impact factor: 5.103

Review 8.  Comparative analysis of Reoviridae reverse genetics methods.

Authors:  Shane D Trask; Karl W Boehme; Terence S Dermody; John T Patton
Journal:  Methods       Date:  2012-06-08       Impact factor: 3.608

9.  Infectious Bursal Disease Virus Hijacks Endosomal Membranes as the Scaffolding Structure for Viral Replication.

Authors:  María Cecilia Gimenez; Flavia Adriana Zanetti; Mauricio R Terebiznik; María Isabel Colombo; Laura Ruth Delgui
Journal:  J Virol       Date:  2018-05-14       Impact factor: 5.103

10.  Group A Rotavirus VP1 Polymerase and VP2 Core Shell Proteins: Intergenotypic Sequence Variation and In Vitro Functional Compatibility.

Authors:  Courtney L Steger; Crystal E Boudreaux; Leslie E LaConte; James B Pease; Sarah M McDonald
Journal:  J Virol       Date:  2019-01-04       Impact factor: 5.103

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