Literature DB >> 21233006

The coupling of epigenome replication with DNA replication.

Qian Liu1, Zhizhong Gong.   

Abstract

In multicellular organisms, each cell contains the same DNA sequence, but with different epigenetic information that determines the cell specificity. Semi-conservative DNA replication faithfully copies the parental nucleotide sequence into two DNA daughter strands during each cell cycle. At the same time, epigenetic marks such as DNA methylation and histone modifications are either precisely transmitted to the daughter cells or dynamically changed during S-phase. Recent studies indicate that in each cell cycle, many DNA replication related proteins are involved in not only genomic but also epigenomic replication. Histone modification proteins, chromatin remodeling proteins, histone variants, and RNAs participate in the epigenomic replication during S-phase. As a consequence, epigenome replication is closely linked with DNA replication during S-phase.
Copyright © 2010 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21233006     DOI: 10.1016/j.pbi.2010.12.001

Source DB:  PubMed          Journal:  Curr Opin Plant Biol        ISSN: 1369-5266            Impact factor:   7.834


  21 in total

Review 1.  Regulating DNA replication in plants.

Authors:  Maria de la Paz Sanchez; Celina Costas; Joana Sequeira-Mendes; Crisanto Gutierrez
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-12-01       Impact factor: 10.005

2.  Antisilencing role of the RNA-directed DNA methylation pathway and a histone acetyltransferase in Arabidopsis.

Authors:  Xiaojie Li; Weiqiang Qian; Yusheng Zhao; Chunlei Wang; Jie Shen; Jian-Kang Zhu; Zhizhong Gong
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-25       Impact factor: 11.205

3.  Profiling of the Chromatin-associated Proteome Identifies HP1BP3 as a Novel Regulator of Cell Cycle Progression.

Authors:  Bamaprasad Dutta; Yan Ren; Piliang Hao; Kae Hwan Sim; Esther Cheow; Sunil Adav; James P Tam; Siu Kwan Sze
Journal:  Mol Cell Proteomics       Date:  2014-05-15       Impact factor: 5.911

4.  Folate polyglutamylation is involved in chromatin silencing by maintaining global DNA methylation and histone H3K9 dimethylation in Arabidopsis.

Authors:  Hao-Ran Zhou; Fang-Fang Zhang; Ze-Yang Ma; Huan-Wei Huang; Ling Jiang; Tao Cai; Jian-Kang Zhu; Chuyi Zhang; Xin-Jian He
Journal:  Plant Cell       Date:  2013-07-23       Impact factor: 11.277

5.  Requirement for flap endonuclease 1 (FEN1) to maintain genomic stability and transcriptional gene silencing in Arabidopsis.

Authors:  Jixiang Zhang; Shaojun Xie; Jian-Kang Zhu; Zhizhong Gong
Journal:  Plant J       Date:  2016-08-05       Impact factor: 6.417

6.  The Second Subunit of DNA Polymerase Delta Is Required for Genomic Stability and Epigenetic Regulation.

Authors:  Jixiang Zhang; Shaojun Xie; Jinkui Cheng; Jinsheng Lai; Jian-Kang Zhu; Zhizhong Gong
Journal:  Plant Physiol       Date:  2016-04-25       Impact factor: 8.340

7.  The DNA replication factor RFC1 is required for interference-sensitive meiotic crossovers in Arabidopsis thaliana.

Authors:  Yingxiang Wang; Zhihao Cheng; Jiyue Huang; Qian Shi; Yue Hong; Gregory P Copenhaver; Zhizhong Gong; Hong Ma
Journal:  PLoS Genet       Date:  2012-11-08       Impact factor: 5.917

8.  CpG array analysis of histone H3 lysine 4 trimethylation by chromatin immunoprecipitation linked to microarrays analysis in peripheral blood mononuclear cells of IgA nephropathy patients.

Authors:  Suwen Qi; Weiguo Sui; Ming Yang; Jiejing Chen; Yong Dai
Journal:  Yonsei Med J       Date:  2012-03       Impact factor: 2.759

9.  Global epigenomic analysis indicates that epialleles contribute to Allele-specific expression via Allele-specific histone modifications in hybrid rice.

Authors:  Zhibin Guo; Gaoyuan Song; Zhenwei Liu; Xuefeng Qu; Rong Chen; Daiming Jiang; Yunfang Sun; Chuan Liu; Yingguo Zhu; Daichang Yang
Journal:  BMC Genomics       Date:  2015-03-24       Impact factor: 3.969

10.  The Cytosolic Iron-Sulfur Cluster Assembly Protein MMS19 Regulates Transcriptional Gene Silencing, DNA Repair, and Flowering Time in Arabidopsis.

Authors:  Yong-Feng Han; Huan-Wei Huang; Lin Li; Tao Cai; She Chen; Xin-Jian He
Journal:  PLoS One       Date:  2015-06-08       Impact factor: 3.240

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