Literature DB >> 21225265

Ku80 gene is related to non-homologous end-joining and genome stability in Aspergillus niger.

Jinxiang Zhang1, Zhihui Mao, Wei Xue, Ying Li, Guomin Tang, Aoquan Wang, Yingjiu Zhang, Huaming Wang.   

Abstract

In this study, the ku70 and ku80 homologs from the Aspergillus niger genome were identified and their function was analyzed using targeted mutagenesis. The role of the ku80 gene in non-homologous end-joining (NHEJ) was investigated by calculating the frequency of homologous recombination. The transformation test verified that the frequency of homologous recombination significantly increased, from 1.78 to 65.6% in ku80 single deletion strains and to 100% in ku70/ku80 double deletion strains. These results suggest that the ku80 gene is important for non-homologous end-joining. Although the morphology of the ku deletion strains colonies was similar to that of the wildtype strain, mutants were more sensitive to the mutagen phleomycin. Furthermore, the purified ku80 deletion strain produced some sectored colonies on hygromycin B-containing plates. This result suggests that the ku80 gene deletion leads to genomic instability in A. niger.

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Year:  2011        PMID: 21225265     DOI: 10.1007/s00284-010-9853-5

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  20 in total

Review 1.  Mechanism and regulation of human non-homologous DNA end-joining.

Authors:  Michael R Lieber; Yunmei Ma; Ulrich Pannicke; Klaus Schwarz
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2.  Suppression of gross chromosomal rearrangements by yKu70-yKu80 heterodimer through DNA damage checkpoints.

Authors:  Soma Banerjee; Stephanie Smith; Kyungjae Myung
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3.  Highly efficient gene targeting in the Aspergillus niger kusA mutant.

Authors:  Vera Meyer; Mark Arentshorst; Aymen El-Ghezal; Ann-Christin Drews; Rolf Kooistra; Cees A M J J van den Hondel; Arthur F J Ram
Journal:  J Biotechnol       Date:  2007-01-10       Impact factor: 3.307

Review 4.  DNA end-joining: from yeast to man.

Authors:  S E Critchlow; S P Jackson
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5.  Defining the minimal domain of Ku80 for interaction with Ku70.

Authors:  O Osipovich; S K Durum; K Muegge
Journal:  J Biol Chem       Date:  1997-10-24       Impact factor: 5.157

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Authors:  M J Hynes; C M Corrick; J A King
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7.  A versatile and efficient gene-targeting system for Aspergillus nidulans.

Authors:  Tania Nayak; Edyta Szewczyk; C Elizabeth Oakley; Aysha Osmani; Leena Ukil; Sandra L Murray; Michael J Hynes; Stephen A Osmani; Berl R Oakley
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8.  Identification of a Saccharomyces cerevisiae Ku80 homologue: roles in DNA double strand break rejoining and in telomeric maintenance.

Authors:  S J Boulton; S P Jackson
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Authors:  M J Difilippantonio; J Zhu; H T Chen; E Meffre; M C Nussenzweig; E E Max; T Ried; A Nussenzweig
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