Literature DB >> 21224337

A three-dimensional multiscale model for gas exchange in fruit.

Quang Tri Ho1, Pieter Verboven, Bert E Verlinden, Els Herremans, Martine Wevers, Jan Carmeliet, Bart M Nicolaï.   

Abstract

Respiration of bulky plant organs such as roots, tubers, stems, seeds, and fruit depends very much on oxygen (O2) availability and often follows a Michaelis-Menten-like response. A multiscale model is presented to calculate gas exchange in plants using the microscale geometry of the tissue, or vice versa, local concentrations in the cells from macroscopic gas concentration profiles. This approach provides a computationally feasible and accurate analysis of cell metabolism in any plant organ during hypoxia and anoxia. The predicted O2 and carbon dioxide (CO2) partial pressure profiles compared very well with experimental data, thereby validating the multiscale model. The important microscale geometrical features are the shape, size, and three-dimensional connectivity of cells and air spaces. It was demonstrated that the gas-exchange properties of the cell wall and cell membrane have little effect on the cellular gas exchange of apple (Malus×domestica) parenchyma tissue. The analysis clearly confirmed that cells are an additional route for CO2 transport, while for O2 the intercellular spaces are the main diffusion route. The simulation results also showed that the local gas concentration gradients were steeper in the cells than in the surrounding air spaces. Therefore, to analyze the cellular metabolism under hypoxic and anoxic conditions, the microscale model is required to calculate the correct intracellular concentrations. Understanding the O2 response of plants and plant organs thus not only requires knowledge of external conditions, dimensions, gas-exchange properties of the tissues, and cellular respiration kinetics but also of microstructure.

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Year:  2011        PMID: 21224337      PMCID: PMC3046576          DOI: 10.1104/pp.110.169391

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  20 in total

1.  Genotype effects on internal gas gradients in apple fruit.

Authors:  Q Tri Ho; Pieter Verboven; Bert E Verlinden; Ann Schenk; Mulugeta A Delele; Hardy Rolletschek; Jef Vercammen; Bart M Nicolaï
Journal:  J Exp Bot       Date:  2010-05-06       Impact factor: 6.992

2.  Gradients of Intercellular CO(2) Levels Across the Leaf Mesophyll.

Authors:  D F Parkhurst; S C Wong; G D Farquhar; I R Cowan
Journal:  Plant Physiol       Date:  1988-04       Impact factor: 8.340

3.  Intercellular Diffusion Limits to CO(2) Uptake in Leaves : Studies in Air and Helox.

Authors:  D F Parkhurst; K A Mott
Journal:  Plant Physiol       Date:  1990-11       Impact factor: 8.340

4.  A permeation-diffusion-reaction model of gas transport in cellular tissue of plant materials.

Authors:  Q Tri Ho; Bert E Verlinden; Pieter Verboven; Stefan Vandewalle; Bart M Nicolaï
Journal:  J Exp Bot       Date:  2006-11-03       Impact factor: 6.992

5.  Measuring and interpreting respiratory critical oxygen pressures in roots.

Authors:  William Armstrong; Trevor Webb; Marcus Darwent; Peter M Beckett
Journal:  Ann Bot       Date:  2008-09-26       Impact factor: 4.357

6.  Energy state and its control on seed development: starch accumulation is associated with high ATP and steep oxygen gradients within barley grains.

Authors:  Hardy Rolletschek; Winfriede Weschke; Hans Weber; Ulrich Wobus; Ljudmilla Borisjuk
Journal:  J Exp Bot       Date:  2004-04-08       Impact factor: 6.992

7.  Soil water deficits decrease the internal conductance to CO2 transfer but atmospheric water deficits do not.

Authors:  C R Warren
Journal:  J Exp Bot       Date:  2008-01-31       Impact factor: 6.992

Review 8.  Response of plant metabolism to too little oxygen.

Authors:  Peter Geigenberger
Journal:  Curr Opin Plant Biol       Date:  2003-06       Impact factor: 7.834

9.  Phloem metabolism and function have to cope with low internal oxygen.

Authors:  Joost T van Dongen; Ulrich Schurr; Michelle Pfister; Peter Geigenberger
Journal:  Plant Physiol       Date:  2003-04       Impact factor: 8.340

10.  A continuum model for metabolic gas exchange in pear fruit.

Authors:  Q Tri Ho; Pieter Verboven; Bert E Verlinden; Jeroen Lammertyn; Stefan Vandewalle; Bart M Nicolaï
Journal:  PLoS Comput Biol       Date:  2008-03-07       Impact factor: 4.475

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  20 in total

1.  An approach to multiscale modelling with graph grammars.

Authors:  Yongzhi Ong; Katarína Streit; Michael Henke; Winfried Kurth
Journal:  Ann Bot       Date:  2014-09       Impact factor: 4.357

2.  Cross-scale modelling of transpiration from stomata via the leaf boundary layer.

Authors:  Thijs Defraeye; Dominique Derome; Pieter Verboven; Jan Carmeliet; Bart Nicolai
Journal:  Ann Bot       Date:  2014-09       Impact factor: 4.357

3.  Quantitative neutron imaging of water distribution, venation network and sap flow in leaves.

Authors:  Thijs Defraeye; Dominique Derome; Wondwosen Aregawi; Dennis Cantré; Stefan Hartmann; Eberhard Lehmann; Jan Carmeliet; Frédéric Voisard; Pieter Verboven; Bart Nicolai
Journal:  Planta       Date:  2014-06-13       Impact factor: 4.116

4.  A plant cell division algorithm based on cell biomechanics and ellipse-fitting.

Authors:  Metadel K Abera; Pieter Verboven; Thijs Defraeye; Solomon Workneh Fanta; Maarten L A T M Hertog; Jan Carmeliet; Bart M Nicolai
Journal:  Ann Bot       Date:  2014-09       Impact factor: 4.357

5.  Aerenchyma, gas diffusion, and catalase activity in Typha domingensis: a complementary model for radial oxygen loss.

Authors:  Vinícius P Duarte; Marcio P Pereira; Felipe F Corrêa; Evaristo M de Castro; Fabricio J Pereira
Journal:  Protoplasma       Date:  2021-01-06       Impact factor: 3.356

6.  Structures of chlorophyll catabolites in bananas (Musa acuminata) reveal a split path of chlorophyll breakdown in a ripening fruit.

Authors:  Simone Moser; Thomas Müller; Andreas Holzinger; Cornelius Lütz; Bernhard Kräutler
Journal:  Chemistry       Date:  2012-07-16       Impact factor: 5.236

7.  A microscale model for combined CO(2) diffusion and photosynthesis in leaves.

Authors:  Quang Tri Ho; Pieter Verboven; Xinyou Yin; Paul C Struik; Bart M Nicolaï
Journal:  PLoS One       Date:  2012-11-07       Impact factor: 3.240

8.  Automatic analysis of the 3-D microstructure of fruit parenchyma tissue using X-ray micro-CT explains differences in aeration.

Authors:  Els Herremans; Pieter Verboven; Bert E Verlinden; Dennis Cantre; Metadel Abera; Martine Wevers; Bart M Nicolaï
Journal:  BMC Plant Biol       Date:  2015-10-30       Impact factor: 4.215

Review 9.  Optical oxygen micro- and nanosensors for plant applications.

Authors:  Cindy Ast; Elmar Schmälzlin; Hans-Gerd Löhmannsröben; Joost T van Dongen
Journal:  Sensors (Basel)       Date:  2012-05-25       Impact factor: 3.576

10.  Spatial development of transport structures in apple (Malus × domestica Borkh.) fruit.

Authors:  Els Herremans; Pieter Verboven; Maarten L A T M Hertog; Dennis Cantre; Mattias van Dael; Thomas De Schryver; Luc Van Hoorebeke; Bart M Nicolaï
Journal:  Front Plant Sci       Date:  2015-09-01       Impact factor: 5.753

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