Literature DB >> 21219859

Efficient mutation identification in zebrafish by microarray capturing and next generation sequencing.

Franck Bontems1, Loic Baerlocher, Sabrina Mehenni, Ilham Bahechar, Laurent Farinelli, Roland Dosch.   

Abstract

Fish models like medaka, stickleback or zebrafish provide a valuable resource to study vertebrate genes. However, finding genetic variants e.g. mutations in the genome is still arduous. Here we used a combination of microarray capturing and next generation sequencing to identify the affected gene in the mozartkugelp11cv (mzlp11cv) mutant zebrafish. We discovered a 31-bp deletion in macf1 demonstrating the potential of this technique to efficiently isolate mutations in a vertebrate genome.
Copyright © 2011 Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Year:  2011        PMID: 21219859     DOI: 10.1016/j.bbrc.2011.01.024

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  2 in total

Review 1.  Using next-generation sequencing to isolate mutant genes from forward genetic screens.

Authors:  Korbinian Schneeberger
Journal:  Nat Rev Genet       Date:  2014-08-20       Impact factor: 53.242

2.  Functional equivalence of germ plasm organizers.

Authors:  Pritesh Krishnakumar; Stephan Riemer; Roshan Perera; Thomas Lingner; Alexander Goloborodko; Hazem Khalifa; Franck Bontems; Felix Kaufholz; Mohamed A El-Brolosy; Roland Dosch
Journal:  PLoS Genet       Date:  2018-11-06       Impact factor: 5.917

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.