Literature DB >> 21212959

Molecular studies in olive (Olea europaea L.): overview on DNA markers applications and recent advances in genome analysis.

T Bracci1, M Busconi, C Fogher, L Sebastiani.   

Abstract

Olive (Olea europaea L.) is one of the oldest agricultural tree crops worldwide and is an important source of oil with beneficial properties for human health. This emblematic tree crop of the Mediterranean Basin, which has conserved a very wide germplasm estimated in more than 1,200 cultivars, is a diploid species (2n = 2x = 46) that is present in two forms, namely wild (Olea europaea subsp. europaea var. sylvestris) and cultivated (Olea europaea subsp. europaea var. europaea). In spite of its economic and nutritional importance, there are few data about the genetic of olive if compared with other fruit crops. Available molecular data are especially related to the application of molecular markers to the analysis of genetic variability in Olea europaea complex and to develop efficient molecular tools for the olive oil origin traceability. With regard to genomic research, in the last years efforts are made for the identification of expressed sequence tag, with particular interest in those sequences expressed during fruit development and in pollen allergens. Very recently the sequencing of chloroplast genome provided new information on the olive nucleotide sequence, opening the olive genomic era. In this article, we provide an overview of the most relevant results in olive molecular studies. A particular attention was given to DNA markers and their application that constitute the most part of published researches. The first important results in genome analysis were reported.

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Year:  2011        PMID: 21212959     DOI: 10.1007/s00299-010-0991-9

Source DB:  PubMed          Journal:  Plant Cell Rep        ISSN: 0721-7714            Impact factor:   4.570


  58 in total

1.  Oleosin gene expression in olive.

Authors:  Katerina Giannoulia; Georgios Banilas; Polydefkis Hatzopoulos
Journal:  J Plant Physiol       Date:  2006-06-09       Impact factor: 3.549

2.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

3.  AFLP: a new technique for DNA fingerprinting.

Authors:  P Vos; R Hogers; M Bleeker; M Reijans; T van de Lee; M Hornes; A Frijters; J Pot; J Peleman; M Kuiper
Journal:  Nucleic Acids Res       Date:  1995-11-11       Impact factor: 16.971

4.  On chloroplast DNA variations in the olive ( Olea europaea L.) complex: comparison of RFLP and PCR polymorphisms.

Authors:  G. Besnard; A. Bervillé
Journal:  Theor Appl Genet       Date:  2002-02-08       Impact factor: 5.699

5.  Identification of microsatellite loci in olive (Olea europaea) and their characaterization in Italian and Iberian olive trees.

Authors:  K M Sefc; M S Lopes; D Mendonça; M R Dos Santos; M L Da Câmara Machado; A Da Câmara Machado
Journal:  Mol Ecol       Date:  2000-08       Impact factor: 6.185

6.  Amount and organization of the heterochromatin in Olea europaea and related species.

Authors:  M B Bitonti; R Cozza; A Chiappetta; A Contento; S Minelli; M Ceccarelli; M T Gelati; F Maggini; L Baldoni; P G Cionini
Journal:  Heredity (Edinb)       Date:  1999-08       Impact factor: 3.821

7.  Effect of prolonged vegetative reproduction of olive tree cultivars (Olea europaea L.) in mitochondrial homoplasmy and heteroplasmy.

Authors:  Angel García-Díaz; Ricardo Oya; Antonio Sánchez; Francisco Luque
Journal:  Genome       Date:  2003-06       Impact factor: 2.166

Review 8.  Allergenic diversity of the olive pollen.

Authors:  R Rodríguez; M Villalba; E Batanero; E M González; R I Monsalve; S Huecas; M L Tejera; A Ledesma
Journal:  Allergy       Date:  2002       Impact factor: 13.146

Review 9.  Construction of a genetic linkage map in man using restriction fragment length polymorphisms.

Authors:  D Botstein; R L White; M Skolnick; R W Davis
Journal:  Am J Hum Genet       Date:  1980-05       Impact factor: 11.025

10.  Identification of new polymorphic regions and differentiation of cultivated olives (Olea europaea L.) through plastome sequence comparison.

Authors:  Roberto Mariotti; Nicolò G M Cultrera; Concepcion Muñoz Díez; Luciana Baldoni; Andrea Rubini
Journal:  BMC Plant Biol       Date:  2010-09-24       Impact factor: 4.215

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  19 in total

1.  Involvement of alternative oxidase (AOX) in adventitious rooting of Olea europaea L. microshoots is linked to adaptive phenylpropanoid and lignin metabolism.

Authors:  E Santos Macedo; D Sircar; H G Cardoso; A Peixe; B Arnholdt-Schmitt
Journal:  Plant Cell Rep       Date:  2012-04-28       Impact factor: 4.570

2.  Assessment of population structure, genetic diversity and relationship of Mediterranean olive accessions using SSR markers and computational tools.

Authors:  Rayda Ben Ayed; Sezai Ercişli; Mohsen Hanana; Ahmed Rebai; Fabienne Moreau
Journal:  Biotechnol Lett       Date:  2021-11-11       Impact factor: 2.461

3.  Selective recognition of DNA from olive leaves and olive oil by PNA and modified-PNA microarrays.

Authors:  Stefano Rossi; Alessandro Calabretta; Tullia Tedeschi; Stefano Sforza; Sergio Arcioni; Luciana Baldoni; Roberto Corradini; Rosangela Marchelli
Journal:  Artif DNA PNA XNA       Date:  2012-04-01

4.  De novo assembly and functional annotation of the olive (Olea europaea) transcriptome.

Authors:  Antonio Muñoz-Mérida; Juan José González-Plaza; Andrés Cañada; Ana María Blanco; Maria del Carmen García-López; José Manuel Rodríguez; Laia Pedrola; M Dolores Sicardo; M Luisa Hernández; Raúl De la Rosa; Angjelina Belaj; Mayte Gil-Borja; Francisco Luque; José Manuel Martínez-Rivas; David G Pisano; Oswaldo Trelles; Victoriano Valpuesta; Carmen R Beuzón
Journal:  DNA Res       Date:  2013-01-07       Impact factor: 4.458

5.  Elucidate genetic diversity and population structure of Olea europaea L. germplasm in Iran using AFLP and IRAP molecular markers.

Authors:  Esmaeil Khaleghi; Karim Sorkheh; Maryam Hosseni Chaleshtori; Sezai Ercisli
Journal:  3 Biotech       Date:  2017-04-27       Impact factor: 2.893

Review 6.  Traditional Uses, Phytochemistry, and Pharmacology of Olea europaea (Olive).

Authors:  Muhammad Ali Hashmi; Afsar Khan; Muhammad Hanif; Umar Farooq; Shagufta Perveen
Journal:  Evid Based Complement Alternat Med       Date:  2015-02-23       Impact factor: 2.629

7.  SNP discovery by illumina-based transcriptome sequencing of the olive and the genetic characterization of Turkish olive genotypes revealed by AFLP, SSR and SNP markers.

Authors:  Hilal Betul Kaya; Oznur Cetin; Hulya Kaya; Mustafa Sahin; Filiz Sefer; Abdullah Kahraman; Bahattin Tanyolac
Journal:  PLoS One       Date:  2013-09-13       Impact factor: 3.240

8.  Description of olive morphological parameters by using open access software.

Authors:  Konstantinos N Blazakis; Maria Kosma; George Kostelenos; Luciana Baldoni; Marina Bufacchi; Panagiotis Kalaitzis
Journal:  Plant Methods       Date:  2017-12-11       Impact factor: 4.993

Review 9.  Recent developments in olive (Olea europaea L.) genetics and genomics: applications in taxonomy, varietal identification, traceability and breeding.

Authors:  L Sebastiani; M Busconi
Journal:  Plant Cell Rep       Date:  2017-04-22       Impact factor: 4.570

10.  Comparative transcriptome analysis of two olive cultivars in response to NaCl-stress.

Authors:  Christos Bazakos; Maria E Manioudaki; Ioannis Therios; Demetrios Voyiatzis; Dimitris Kafetzopoulos; Tala Awada; Panagiotis Kalaitzis
Journal:  PLoS One       Date:  2012-08-30       Impact factor: 3.240

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