| Literature DB >> 21208459 |
Ngo T Hoa1, Tran T B Chieu, Ho D T Nghia, Nguyen T H Mai, Pham H Anh, Marcel Wolbers, Stephen Baker, James I Campbell, Nguyen V V Chau, Tran T Hien, Jeremy Farrar, Constance Schultsz.
Abstract
BACKGROUND: Streptococcus suis is an emerging zoonotic pathogen and is the leading cause of bacterial meningitis in adults in Vietnam. Systematic data on the antimicrobial susceptibility profiles of S. suis strains isolated from human cases are lacking. We studied antimicrobial resistance and associated resistance determinants in S. suis isolated from patients with meningitis in southern Vietnam.Entities:
Mesh:
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Year: 2011 PMID: 21208459 PMCID: PMC3022717 DOI: 10.1186/1471-2334-11-6
Source DB: PubMed Journal: BMC Infect Dis ISSN: 1471-2334 Impact factor: 3.090
Distribution of minimal inhibitory concentrations of antimicrobial agents tested in Streptococcus suis strains isolated from patients with meningitis
| Antimicrobial Agent | Minimal Inhibitory Concentrations | ||||
|---|---|---|---|---|---|
| Tetracycline | S ≤ 2; R ≥ 8 | 0.125-->256 | 24 | 32 | 88.6 |
| Erythromycin | S ≤ 0.25; R ≥ 1 | 0.016-- >256 | 0.064 | >256 | 22.2 |
| Chloramphenicol | S ≤ 4; R ≥ 16 | 0.5-96 | 3 | 4 | 8.6@ |
| Penicillin | S ≤ 0.12; R ≥ 4 | 0.012-0.064 | 0.032 | 0.047 | 0 |
| Ceftriaxone | S ≤ 0.5 | 0.025-0.38 | 0.094 | 0.125 | 0 |
| Vancomycin | S ≤ 1 | 0.25-0.5 | 0.38 | 0.5 | 0 |
*: Breakpoints are based on equivalent CLSI breakpoints for Streptococcus spp. viridans group
#: MIC50, MIC90 are the MIC values inhibiting growth of 50% and 90% of tested isolates, respectively.
@: Including the intermediate resistant isolates
Primers used to amplify the tetracycline and macrolide resistance determinants and for sequencing purpose
| Primer | Sequence (5' - 3') | Product size | Position in coding sequence | Reference |
|---|---|---|---|---|
| erm(A)-F | CCCGAAAAATACGCAAAATTTCAT | 590 | 15-38 | [ |
| erm(A)-R | CCCTGTTTACCCATTTATAAACG | 604-582 | ||
| erm(B)-F | TGGTATTCCAAATGCGTAATG | 745 | 203-183 | |
| erm(B)-R | CTGTGGTATGGCGGGTAAGT | 541-522 | ||
| mef(A)-F* | CAATATGGGCAGGGCAAG | 317 | 38-55 | |
| mef(A)-R* | AAGCTGTTCCAATGCTACGG | 352-333 | ||
| tet(M)-F | GTGGACAAAGGTACAACGAG | 406 | 106-125 | |
| tet(M)-R | CGGTAAAGTTCGTCACACAC | 511-492 | ||
| tet(O)- F | AACTTAGGCATTCTGGCTCAC | 515 | 13-43 | |
| tet(O)- R | TCCCACTGTTCCATATCGTCA | 527-507 | ||
| tet(K)-F | GATCAATTGTAGCTTTAGGTGAAGG | 155 | 344-368 | |
| tet(K)-R | TTTTGTTGATTTACCAGGTACCATT | 498-474 | ||
| tet(L)-F | TGGTGGAATGATAGCCCATT | 229 | 384-403 | |
| tet(L)-R | CAGGAATGACAGCACGCTAA | 612-593 | ||
| 16S-rDNA-F | GAGTACGACCGCAAGGTTGA | 100 | 886-905 | |
| 16S-rDNA -R | CTGGTAAGGTTCTTCGCGTTG | 985-964 | ||
| ss-Tn | GCCATGACCTATCTTATA | 476 | 16083-16100 | [ |
| ss-Tn | CTAGATTGCGTCCAA | 16559-16545 | ||
| tet(32)For | GAACCAGATGCTGCTCTT | 620 | 619-637 | [ |
| Tet(32)Rev | CATAGCCACGCCCACATGAT | 1239-1220 | ||
| SScps2J-F | CAAACGCAAGGAATTACGGTATC | 236 | 209-231 | [ |
| SScps2J-R | CATTTCCTAAGTCTCGCACC | 445-426 | ||
| tet(L)Ng-F | TCGTTAGCGTGCTGTCATTC | 698 | 680-700 | [ |
| tet(L)-R-pDG364 | CTTAGAAATCCCTTTGAGAAT | 1378-1358 | This study | |
| tet(W)- F | TTGGAATTCTTGCCCATGTAGACGC | 1872 | 18-42 | This study |
| tet(W)- R | TTGTCCAGGCGGTTGTTTGGAC | 1889-1868 | ||
| tet(W)-F-HN | GGTGCAGTTGGAGGTTGTTT | 410 | 1179-1198 | |
| tet(W)-R-HN | CCTTCAATGCCTGTTCCAAT | 1569-1588 | ||
| tet(O)-F-pDG364 | ATGAAAATAATTAACTTAGG | 1920 | 1-19 | |
| tet(O)-R-pDG364 | TTAAGCTAACTTGTGGAACA | 1920-1901 | ||
| ss-tet(M)-whole-F | ACAGACAAAGAACTATCCTTAATG | 2500 | 419-396 | |
| ss-tet(M)-whole-R | GTACCCAGTTTAAGAATACCTTTATC | 161-136 | ||
| tet(O)-2-F | TTCAAGACGCCTCCCTGTTC | 679-698 | This study | |
| tet(O)-2-R | ATTTGGCGGGACTTCTATGTGG | 1318-1296 | ||
| ss-tet(M)-Fseq1 | GTTAAATCACTACGATAT | 1763-1745 | ||
| ss-tet(M)-Rseq1 | ATAGTGTTCTTGGAGATA | 906-929 | ||
| ss-tet(M)-Fseq2 | GTATAATTTCATGTGTCG | 1162-1144 | ||
| ss-tet(M)-Rseq2 | AGATGGCGTACAAGCACA | 305-323 | ||
| ss-PAI-P8-tet(M)-R | GCCCTTTTGGGTTTTTGAAT | -33- -14 | ||
| ss-PAItetM-P9over F | GGGAATCCCCATTTTCCTAA | 366-347 | ||
*: These primers were named mef(A/E) in the referenced publication.
Figure 1Proportional distribution of antimicrobial resistant . Streptoccoccus suis strains were isolated from patients with acute bacterial meningitis admitted to the Hospital for Tropical Diseases between 1998 and 2008. The numbers above each column correspond to the total number of strains isolated in each year (the lone isolate from 1997 is not included. Diagonal, grey and white bars represent the proportion of strains resistant to tetracycline, erythromycin and chloramphenicol, respectively. Black bars represent the proportion of MDR strains (resistant to tetracycline, erythromycin and chloramphenicol).
Figure 2Chromosomal location of . (A1, B1) PFGE patterns of SmaI digested genomic DNA of four S. suis serotype 2 strains, (A2, B2): Southern blot hybridization of SmaI digested genomic DNA of four strains with 698 bp- tet(L) probe. (A) Lane 1: S. suis BM308; lane 2: S. suis BM407; (B) lane 1: S. suis EN031; lane 2: S. suis EN241. (A, B) Lane 3: 698 bp-tet(L) PCR amplicons, which was added to the well of PFGE gel one hour prior to completion of the PFGE running programme. Molecular weights of marker bands, consisting of XbaI digested genomic DNA of Salmonella serotype Braenderup strain (H9812), spanning the region containing the positive signals of tet(L), are indicated.
Groups of S. suis strains with different combinations of tetracycline genes and respective minimal inhibitory concentrations.
| Number of isolates | Group | Tetracycline resistance genes | MIC50* (mg/L) | Range of MIC (mg/L) | p-values# |
|---|---|---|---|---|---|
| 5 | 1 | 64 | 64 - 256 | 0.01 (group 1 vs. 2) | |
| <0.001 (group 1 vs. 3) | |||||
| 0.002 (group 1 vs. 4) | |||||
| 0.002 (group 2 vs. 3) | |||||
| 0.03 (group 2 vs. 4) | |||||
| 0.08 (group 3 vs. 4) | |||||
| 8 | 2 | 32 | 24 - 48 | ||
| 116 | 3 | 24 | 3 - 48 | ||
| 22 | 4 | 24 | 16 - 32 | ||
* MIC50 is the MIC value inhibiting growth of 50% of tested isolates
Pair-wise comparisons based on Wilcoxon rank-sum tests with Holm correction for multiple testing