Literature DB >> 21206043

Crystallization and preliminary crystallographic analysis of human LR11 Vps10p domain.

Zenzaburo Nakata1, Masamichi Nagae, Norihisa Yasui, Hideaki Bujo, Terukazu Nogi, Junichi Takagi.   

Abstract

Low-density lipoprotein receptor (LDLR) relative with 11 binding repeats (LR11; also known as sorLA) is genetically associated with late-onset Alzheimer's disease and is thought to be involved in neurodegenerative processes. LR11 contains a vacuolar protein-sorting 10 protein (Vps10p) domain. As this domain has been implicated in protein-protein interaction in other receptors, its structure and function are of great biological interest. Human LR11 Vps10p domain was expressed in mammalian cells and the purified protein was crystallized using the hanging-drop vapour-diffusion method. Enzymatic deglycosylation of the sample was critical to obtaining diffraction-quality crystals. Deglycosylated LR11 Vps10p-domain crystals belonged to the hexagonal space group P6(1)22. A diffraction data set was collected to 2.4 Å resolution and a clear molecular-replacement solution was obtained.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 21206043      PMCID: PMC3079991          DOI: 10.1107/S1744309110048153

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  25 in total

1.  The neuronal sortilin-related receptor SORL1 is genetically associated with Alzheimer disease.

Authors:  Ekaterina Rogaeva; Yan Meng; Joseph H Lee; Yongjun Gu; Toshitaka Kawarai; Fanggeng Zou; Taiichi Katayama; Clinton T Baldwin; Rong Cheng; Hiroshi Hasegawa; Fusheng Chen; Nobuto Shibata; Kathryn L Lunetta; Raphaelle Pardossi-Piquard; Christopher Bohm; Yosuke Wakutani; L Adrienne Cupples; Karen T Cuenco; Robert C Green; Lorenzo Pinessi; Innocenzo Rainero; Sandro Sorbi; Amalia Bruni; Ranjan Duara; Robert P Friedland; Rivka Inzelberg; Wolfgang Hampe; Hideaki Bujo; You-Qiang Song; Olav M Andersen; Thomas E Willnow; Neill Graff-Radford; Ronald C Petersen; Dennis Dickson; Sandy D Der; Paul E Fraser; Gerold Schmitt-Ulms; Steven Younkin; Richard Mayeux; Lindsay A Farrer; Peter St George-Hyslop
Journal:  Nat Genet       Date:  2007-01-14       Impact factor: 38.330

2.  Ligands bind to Sortilin in the tunnel of a ten-bladed beta-propeller domain.

Authors:  Esben M Quistgaard; Peder Madsen; Morten K Grøftehauge; Poul Nissen; Claus M Petersen; Søren S Thirup
Journal:  Nat Struct Mol Biol       Date:  2009-01-04       Impact factor: 15.369

Review 3.  VPS10P-domain receptors - regulators of neuronal viability and function.

Authors:  Thomas E Willnow; Claus M Petersen; Anders Nykjaer
Journal:  Nat Rev Neurosci       Date:  2008-11-12       Impact factor: 34.870

Review 4.  Structure and distribution of modules in extracellular proteins.

Authors:  P Bork; A K Downing; B Kieffer; I D Campbell
Journal:  Q Rev Biophys       Date:  1996-05       Impact factor: 5.318

5.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

6.  Interaction of the cytosolic domains of sorLA/LR11 with the amyloid precursor protein (APP) and beta-secretase beta-site APP-cleaving enzyme.

Authors:  Robert Spoelgen; Christine A F von Arnim; Anne V Thomas; Ithan D Peltan; Mirjam Koker; Amy Deng; Michael C Irizarry; Olav M Andersen; Thomas E Willnow; Bradley T Hyman
Journal:  J Neurosci       Date:  2006-01-11       Impact factor: 6.167

7.  A secreted soluble form of LR11, specifically expressed in intimal smooth muscle cells, accelerates formation of lipid-laden macrophages.

Authors:  Kenji Ohwaki; Hideaki Bujo; Meizi Jiang; Hiroyuki Yamazaki; Wolfgang J Schneider; Yasushi Saito
Journal:  Arterioscler Thromb Vasc Biol       Date:  2007-03-01       Impact factor: 8.311

8.  Sortilin controls intracellular sorting of brain-derived neurotrophic factor to the regulated secretory pathway.

Authors:  Zhe-Yu Chen; Alessandro Ieraci; Henry Teng; Henning Dall; Chui-Xiang Meng; Daniel G Herrera; Anders Nykjaer; Barbara L Hempstead; Francis S Lee
Journal:  J Neurosci       Date:  2005-06-29       Impact factor: 6.167

9.  Loss of apolipoprotein E receptor LR11 in Alzheimer disease.

Authors:  Clemens R Scherzer; Katrin Offe; Marla Gearing; Howard D Rees; Guofu Fang; Craig J Heilman; Chica Schaller; Hideaki Bujo; Allan I Levey; James J Lah
Journal:  Arch Neurol       Date:  2004-08

10.  Molecular dissection of the interaction between amyloid precursor protein and its neuronal trafficking receptor SorLA/LR11.

Authors:  Olav M Andersen; Vanessa Schmidt; Robert Spoelgen; Jørgen Gliemann; Joachim Behlke; Denise Galatis; William J McKinstry; Michael W Parker; Colin L Masters; Bradley T Hyman; Roberto Cappai; Thomas E Willnow
Journal:  Biochemistry       Date:  2006-02-28       Impact factor: 3.162

View more
  3 in total

1.  Structural basis for amyloidogenic peptide recognition by sorLA.

Authors:  Yu Kitago; Masamichi Nagae; Zenzaburo Nakata; Maho Yagi-Utsumi; Shizuka Takagi-Niidome; Emiko Mihara; Terukazu Nogi; Koichi Kato; Junichi Takagi
Journal:  Nat Struct Mol Biol       Date:  2015-02-02       Impact factor: 15.369

Review 2.  Function and 3D structure of the N-glycans on glycoproteins.

Authors:  Masamichi Nagae; Yoshiki Yamaguchi
Journal:  Int J Mol Sci       Date:  2012-07-06       Impact factor: 6.208

3.  Soluble LR11/SorLA represses thermogenesis in adipose tissue and correlates with BMI in humans.

Authors:  Andrew J Whittle; Meizi Jiang; Vivian Peirce; Joana Relat; Sam Virtue; Hiroyuki Ebinuma; Isamu Fukamachi; Takashi Yamaguchi; Mao Takahashi; Takeyoshi Murano; Ichiro Tatsuno; Masahiro Takeuchi; Chiaki Nakaseko; Wenlong Jin; Zhehu Jin; Mark Campbell; Wolfgang J Schneider; Antonio Vidal-Puig; Hideaki Bujo
Journal:  Nat Commun       Date:  2015-11-20       Impact factor: 14.919

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.