| Literature DB >> 21203220 |
Ali Kakanejadifard, Vahid Amani.
Abstract
The asymmetric unit of the title compound, C(8)H(8)N(4)O(2), contains one half-mol-ecule; a twofold rotation axis bisects the molecule. An intra-molecular N-H⋯O hydrogen bond results in the formation of a five-membered ring, which displays an envelope conformation. In the crystal structure, inter-molecular O-H⋯N hydrogen bonds link the mol-ecules.Entities:
Year: 2008 PMID: 21203220 PMCID: PMC2962138 DOI: 10.1107/S1600536808021570
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C8H8N4O2 | |
| Orthorhombic, | Mo |
| Hall symbol: -F 2uv 2vw | Cell parameters from 744 reflections |
| θ = 3–30º | |
| µ = 0.12 mm−1 | |
| Prism, light-brown | |
| 0.4 × 0.2 × 0.2 mm |
| Bruker SMART 1000 CCD area-detector diffractometer | 708 reflections with |
| Radiation source: fine-focus sealed tube | |
| Monochromator: graphite | θmax = 28.0º |
| θmin = 2.7º | |
| φ and ω scans | |
| Absorption correction: none | |
| 7925 measured reflections | |
| 983 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max < 0.001 | |
| 983 reflections | Δρmax = 0.43 e Å−3 |
| 67 parameters | Δρmin = −0.25 e Å−3 |
| 1 restraint | Extinction correction: none |
| Primary atom site location: structure-invariant direct methods |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| O1 | 0.47468 (17) | −0.04564 (12) | 0.43944 (6) | 0.0324 (4) | |
| H1 | 0.454 (3) | −0.0611 (18) | 0.4723 (4) | 0.039* | |
| N1 | 0.54273 (19) | 0.04548 (13) | 0.44726 (7) | 0.0261 (4) | |
| N2 | 0.5691 (2) | 0.03307 (14) | 0.35156 (7) | 0.0308 (5) | |
| H2A | 0.5385 | −0.0261 | 0.3513 | 0.037* | |
| C1 | 0.5867 (2) | 0.07818 (15) | 0.40084 (8) | 0.0242 (4) | |
| C2 | 0.5981 (2) | 0.07776 (16) | 0.30119 (8) | 0.0268 (5) | |
| C3 | 0.5745 (2) | 0.03025 (19) | 0.25164 (9) | 0.0358 (6) | |
| H3A | 0.5413 | −0.0337 | 0.2514 | 0.043* | |
| C4 | 0.6000 (3) | 0.0776 (2) | 0.20291 (9) | 0.0412 (6) | |
| H4A | 0.5835 | 0.0457 | 0.1698 | 0.049* |
| O1 | 0.0423 (10) | 0.0304 (8) | 0.0244 (7) | −0.0098 (7) | 0.0009 (7) | 0.0025 (7) |
| N1 | 0.0314 (9) | 0.0243 (9) | 0.0226 (8) | −0.0053 (8) | 0.0002 (7) | 0.0004 (7) |
| N2 | 0.0447 (11) | 0.0279 (9) | 0.0198 (8) | −0.0126 (8) | 0.0022 (8) | −0.0015 (7) |
| C1 | 0.0282 (11) | 0.0261 (10) | 0.0184 (9) | −0.0014 (9) | −0.0009 (8) | −0.0002 (8) |
| C2 | 0.0282 (11) | 0.0334 (11) | 0.0187 (9) | −0.0055 (9) | 0.0016 (8) | −0.0002 (8) |
| C3 | 0.0422 (13) | 0.0422 (13) | 0.0230 (10) | −0.0154 (11) | 0.0041 (10) | −0.0059 (10) |
| C4 | 0.0440 (14) | 0.0596 (17) | 0.0199 (10) | −0.0188 (13) | 0.0004 (10) | −0.0054 (10) |
| O1—H1 | 0.852 (13) | C2—C2i | 1.390 (4) |
| N1—C1 | 1.289 (3) | C2—C3 | 1.388 (3) |
| N1—O1 | 1.422 (2) | C3—C4 | 1.373 (3) |
| N2—C1 | 1.359 (2) | C3—H3A | 0.9300 |
| N2—C2 | 1.398 (3) | C4—C4i | 1.380 (5) |
| N2—H2A | 0.8600 | C4—H4A | 0.9300 |
| C1—C1i | 1.481 (4) | ||
| N1—O1—H1 | 101.8 (17) | C3—C2—N2 | 121.7 (2) |
| C1—N1—O1 | 109.96 (16) | C2i—C2—N2 | 118.68 (11) |
| C1—N2—C2 | 123.50 (18) | C4—C3—C2 | 120.1 (2) |
| C1—N2—H2A | 118.3 | C4—C3—H3A | 120.0 |
| C2—N2—H2A | 118.3 | C2—C3—H3A | 120.0 |
| N1—C1—N2 | 125.13 (19) | C3—C4—C4i | 120.25 (14) |
| N1—C1—C1i | 117.89 (12) | C3—C4—H4A | 119.9 |
| N2—C1—C1i | 116.98 (12) | C4i—C4—H4A | 119.9 |
| C3—C2—C2i | 119.62 (13) | ||
| C1—N2—C2—C3 | −177.8 (2) | C2—N2—C1—C1i | −11.4 (4) |
| C1—N2—C2—C2i | 2.2 (4) | C2i—C2—C3—C4 | −2.1 (4) |
| O1—N1—C1—N2 | 0.8 (3) | N2—C2—C3—C4 | 177.9 (2) |
| O1—N1—C1—C1i | −178.7 (2) | C2—C3—C4—C4i | 0.4 (5) |
| C2—N2—C1—N1 | 169.1 (2) |
| H··· | ||||
| O1—H1···N1ii | 0.852 (13) | 1.971 (10) | 2.763 (2) | 154 |
| N2—H2A···O1 | 0.86 | 2.25 | 2.566 (3) | 102 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯N1i | 0.852 (13) | 1.971 (10) | 2.763 (2) | 154 |
| N2—H2 | 0.86 | 2.25 | 2.566 (3) | 102 |
Symmetry code: (i) .