Literature DB >> 21203218

4-[(E)-4-Bromo-benzyl-ideneamino]-3-methyl-1H-1,2,4-triazole-5(4H)-thione.

Hoong-Kun Fun, Samuel Robinson Jebas, K V Sujith, P S Patil, B Kalluraya, A Muralidharan, S M Dharmaprakash.   

Abstract

In the title mol-ecule, C(10)H(9)BrN(4)S, the dihedral angle between the triazole and benzene rings is 12.32 (19)°. An intra-molecular C-H⋯S hydrogen bond generates an S(6) ring motif. In the crystal packing, centrosymmetrically related mol-ecules are linked into a dimer by N-H⋯S hydrogen bonds, and the dimers are linked into a chain running along [11] by Br⋯N short contacts [3.187 (3) Å]. The crystal packing is further strengthened by π-π inter-actions involving the triazole ring [centroid-centroid distance = 3.322 (2) Å].

Entities:  

Year:  2008        PMID: 21203218      PMCID: PMC2962136          DOI: 10.1107/S1600536808021636

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the pharmacological activity of triazole compounds, see: Bekircan et al. (2006 ▶); Brandt et al. (2007 ▶); Holla et al. (1996 ▶, 2002 ▶); Yale et al. (1966 ▶). For bond-length data, see: Allen et al. (1987 ▶). For graph-set analysis of hydrogen bonding, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C10H9BrN4S M = 297.18 Triclinic, a = 6.9239 (5) Å b = 7.6072 (5) Å c = 11.5982 (8) Å α = 82.453 (5)° β = 88.339 (5)° γ = 68.204 (4)° V = 562.18 (7) Å3 Z = 2 Mo Kα radiation μ = 3.82 mm−1 T = 100.0 (1) K 0.32 × 0.31 × 0.12 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.265, T max = 0.629 13535 measured reflections 3252 independent reflections 2538 reflections with I > 2σ(I) R int = 0.059

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.121 S = 1.09 3252 reflections 146 parameters H-atom parameters constrained Δρmax = 1.20 e Å−3 Δρmin = −1.50 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: APEX2; data reduction: SAINT (Bruker, 2005 ▶); program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808021636/ci2629sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808021636/ci2629Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H9BrN4SZ = 2
Mr = 297.18F000 = 296
Triclinic, P1Dx = 1.756 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71073 Å
a = 6.9239 (5) ÅCell parameters from 5175 reflections
b = 7.6072 (5) Åθ = 2.9–33.2º
c = 11.5982 (8) ŵ = 3.82 mm1
α = 82.453 (5)ºT = 100.0 (1) K
β = 88.339 (5)ºPlate, colourless
γ = 68.204 (4)º0.32 × 0.31 × 0.12 mm
V = 562.18 (7) Å3
Bruker SMART APEXII CCD area-detector diffractometer3252 independent reflections
Radiation source: fine-focus sealed tube2538 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.059
T = 100.0(1) Kθmax = 30.0º
φ and ω scansθmin = 1.8º
Absorption correction: multi-scan(SADABS; Bruker, 2005)h = −9→9
Tmin = 0.265, Tmax = 0.629k = −10→10
13535 measured reflectionsl = −16→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.046H-atom parameters constrained
wR(F2) = 0.121  w = 1/[σ2(Fo2) + (0.0635P)2 + 0.1826P] where P = (Fo2 + 2Fc2)/3
S = 1.09(Δ/σ)max = 0.001
3252 reflectionsΔρmax = 1.20 e Å3
146 parametersΔρmin = −1.50 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Experimental. The data was collected with the Oxford Cyrosystem Cobra low-temperature attachment.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br11.07281 (6)0.01690 (5)0.76969 (3)0.02379 (13)
S10.13495 (15)0.36883 (13)0.17836 (8)0.0247 (2)
N10.5353 (5)0.4917 (4)0.2620 (2)0.0212 (6)
N20.4008 (5)0.5702 (4)0.1661 (2)0.0201 (6)
N30.1919 (5)0.6408 (4)0.0225 (3)0.0243 (6)
N40.3110 (5)0.7506 (4)−0.0027 (3)0.0236 (6)
C10.8184 (6)0.3339 (5)0.4542 (3)0.0237 (7)
H1A0.85340.41210.39570.028*
C20.9486 (6)0.2514 (5)0.5516 (3)0.0246 (7)
H2A1.06980.27510.55900.029*
C30.8955 (6)0.1335 (5)0.6374 (3)0.0214 (7)
C40.7153 (6)0.0956 (5)0.6288 (3)0.0230 (7)
H4A0.68300.01400.68620.028*
C50.5843 (6)0.1829 (5)0.5321 (3)0.0224 (7)
H5A0.46060.16260.52650.027*
C60.6348 (5)0.2997 (5)0.4439 (3)0.0199 (7)
C70.4924 (5)0.3838 (5)0.3443 (3)0.0199 (7)
H7A0.37100.35920.34070.024*
C80.2417 (6)0.5275 (5)0.1234 (3)0.0217 (7)
C90.4376 (6)0.7049 (5)0.0860 (3)0.0211 (7)
C100.5990 (6)0.7828 (5)0.1022 (3)0.0249 (7)
H10A0.63350.83460.02800.037*
H10B0.72090.68280.13770.037*
H10C0.54780.88180.15140.037*
H1N30.11570.6542−0.03840.030*
U11U22U33U12U13U23
Br10.0287 (2)0.02116 (18)0.01825 (18)−0.00691 (14)−0.00647 (13)0.00315 (12)
S10.0301 (5)0.0264 (4)0.0191 (4)−0.0150 (4)−0.0050 (3)0.0069 (3)
N10.0242 (15)0.0186 (13)0.0177 (14)−0.0058 (12)−0.0047 (11)0.0029 (11)
N20.0251 (14)0.0185 (13)0.0154 (13)−0.0085 (12)−0.0020 (11)0.0041 (10)
N30.0318 (16)0.0226 (14)0.0179 (14)−0.0120 (13)−0.0029 (12)0.0058 (11)
N40.0259 (15)0.0242 (15)0.0203 (14)−0.0109 (13)0.0003 (12)0.0040 (11)
C10.0278 (18)0.0222 (16)0.0194 (16)−0.0094 (14)0.0024 (14)0.0028 (13)
C20.0227 (17)0.0252 (17)0.0243 (18)−0.0076 (14)−0.0052 (14)−0.0009 (14)
C30.0253 (17)0.0167 (15)0.0164 (15)−0.0024 (13)−0.0035 (13)0.0022 (12)
C40.0307 (19)0.0178 (15)0.0188 (16)−0.0083 (14)0.0018 (14)0.0007 (12)
C50.0255 (17)0.0198 (16)0.0225 (17)−0.0100 (14)−0.0034 (14)0.0002 (13)
C60.0237 (16)0.0176 (15)0.0173 (15)−0.0074 (13)−0.0001 (13)0.0003 (12)
C70.0239 (16)0.0191 (15)0.0158 (15)−0.0079 (13)−0.0044 (13)0.0009 (12)
C80.0229 (16)0.0210 (16)0.0182 (16)−0.0057 (14)−0.0004 (13)0.0006 (12)
C90.0252 (17)0.0181 (15)0.0195 (16)−0.0088 (14)−0.0006 (13)0.0013 (12)
C100.0285 (18)0.0230 (17)0.0228 (17)−0.0116 (15)−0.0006 (14)0.0047 (13)
Br1—C31.895 (3)C2—C31.386 (5)
S1—C81.686 (4)C2—H2A0.93
N1—C71.278 (4)C3—C41.390 (5)
N1—N21.390 (4)C4—C51.392 (5)
N2—C81.380 (5)C4—H4A0.93
N2—C91.381 (4)C5—C61.390 (5)
N3—C81.331 (4)C5—H5A0.93
N3—N41.377 (4)C6—C71.455 (4)
N3—H1N30.87C7—H7A0.93
N4—C91.296 (5)C9—C101.473 (5)
C1—C21.391 (5)C10—H10A0.96
C1—C61.400 (5)C10—H10B0.96
C1—H1A0.93C10—H10C0.96
C7—N1—N2119.6 (3)C6—C5—H5A119.4
C8—N2—C9108.5 (3)C4—C5—H5A119.4
C8—N2—N1133.0 (3)C5—C6—C1119.2 (3)
C9—N2—N1118.1 (3)C5—C6—C7118.3 (3)
C8—N3—N4114.1 (3)C1—C6—C7122.5 (3)
C8—N3—H1N3137.0N1—C7—C6119.6 (3)
N4—N3—H1N3108.1N1—C7—H7A120.2
C9—N4—N3104.3 (3)C6—C7—H7A120.2
C2—C1—C6120.3 (3)N3—C8—N2102.7 (3)
C2—C1—H1A119.8N3—C8—S1126.6 (3)
C6—C1—H1A119.8N2—C8—S1130.6 (3)
C3—C2—C1119.2 (4)N4—C9—N2110.4 (3)
C3—C2—H2A120.4N4—C9—C10126.1 (3)
C1—C2—H2A120.4N2—C9—C10123.5 (3)
C2—C3—C4121.7 (3)C9—C10—H10A109.5
C2—C3—Br1119.8 (3)C9—C10—H10B109.5
C4—C3—Br1118.5 (3)H10A—C10—H10B109.5
C3—C4—C5118.4 (3)C9—C10—H10C109.5
C3—C4—H4A120.8H10A—C10—H10C109.5
C5—C4—H4A120.8H10B—C10—H10C109.5
C6—C5—C4121.2 (3)
C7—N1—N2—C8−16.6 (6)C5—C6—C7—N1−179.9 (3)
C7—N1—N2—C9171.9 (3)C1—C6—C7—N10.7 (5)
C8—N3—N4—C9−0.5 (4)N4—N3—C8—N20.9 (4)
C6—C1—C2—C30.7 (5)N4—N3—C8—S1−177.3 (3)
C1—C2—C3—C4−0.1 (5)C9—N2—C8—N3−1.0 (4)
C1—C2—C3—Br1179.1 (3)N1—N2—C8—N3−173.0 (3)
C2—C3—C4—C5−1.4 (5)C9—N2—C8—S1177.2 (3)
Br1—C3—C4—C5179.4 (3)N1—N2—C8—S15.1 (6)
C3—C4—C5—C62.3 (5)N3—N4—C9—N2−0.2 (4)
C4—C5—C6—C1−1.7 (5)N3—N4—C9—C10180.0 (3)
C4—C5—C6—C7179.0 (3)C8—N2—C9—N40.8 (4)
C2—C1—C6—C50.1 (5)N1—N2—C9—N4174.2 (3)
C2—C1—C6—C7179.5 (3)C8—N2—C9—C10−179.4 (3)
N2—N1—C7—C6179.2 (3)N1—N2—C9—C10−6.0 (5)
D—H···AD—HH···AD···AD—H···A
N3—H1N3···S1i0.872.483.321 (4)164
C7—H7A···S10.932.503.223 (4)134
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H1N3⋯S1i0.872.483.321 (4)164
C7—H7A⋯S10.932.503.223 (4)134

Symmetry code: (i) .

  5 in total

1.  Synthesis of new bis-1,2,4-triazole derivatives.

Authors:  Olcay Bekircan; Hakan Bektas
Journal:  Molecules       Date:  2006-06-21       Impact factor: 4.411

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Substituted s-triazoles and related compounds.

Authors:  H L Yale; J J Piala
Journal:  J Med Chem       Date:  1966-01       Impact factor: 7.446

4.  Synthesis, characterisation and antifungal activity of some N-bridged heterocycles derived from 3-(3-bromo-4-methoxyphenyl)-4-amino-5-mercapto-1,2,4-triazole.

Authors:  B S Holla; K N Poojary; B Kalluraya; P V Gowda
Journal:  Farmaco       Date:  1996-12

5.  New bis-aminomercaptotriazoles and bis-triazolothiadiazoles as possible anticancer agents.

Authors:  B Shivarama Holla; K Narayana Poojary; B Sooryanarayana Rao; M K Shivananda
Journal:  Eur J Med Chem       Date:  2002-06       Impact factor: 6.514

  5 in total
  2 in total

1.  4-Amino-3-(o-tolyl-oxymeth-yl)-1H-1,2,4-triazole-5(4H)-thione.

Authors:  Hoong-Kun Fun; Wei-Ching Liew; A M Vijesh; Mahesh Padaki; Arun M Isloor
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-18

2.  3-Methyl-4-{(E)-[4-(methyl-sulfan-yl)benzyl-idene]amino}-1H-1,2,4-triazole-5(4H)-thione.

Authors:  B K Sarojini; P S Manjula; Gurumurthy Hegde; Dalbir Kour; Vivek K Gupta; Rajni Kant
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-04-13
  2 in total

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