Literature DB >> 21203157

The 1:1 cocrystal of rac-7-oxabicyclo-[2.2.1]heptane-2,3-dicarboxylic acid and 2-amino-benzothia-zole.

Yun-Yun Wang1, Rui-Ding Hu, Yan-Jun Wang.   

Abstract

In the crystal structure of the title compound, rac-7-oxabicyclo-[2.2.1]heptane-2,3-dicarboxylic acid-2-amino-benzo-thia-zole (1/1), C(8)H(10)O(5)·C(7)H(6)N(2)S, mol-ecules of each component are linked into centrosymmetric dimers by inter-molecular N-H⋯O hydrogen bonds. These dimers are connected by O-H⋯O hydrogen bonds into a chain along the b axis. In addition, π-π inter-actions between aromatic heterocycles occur [centroid-centroid distance of 3.4709 Å and inter-planar spacing of 3.4374 Å between symmetry-related benzothia-zole ring systems.

Entities:  

Year:  2008        PMID: 21203157      PMCID: PMC2962073          DOI: 10.1107/S1600536808015365

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Liu et al. (2002 ▶).

Experimental

Crystal data

C8H10O5·C7H6N2S M = 336.36 Triclinic, a = 8.3082 (1) Å b = 9.0428 (1) Å c = 11.0438 (2) Å α = 67.1546 (8)° β = 83.0101 (8)° γ = 86.9193 (9)° V = 758.92 (2) Å3 Z = 2 Mo Kα radiation μ = 0.24 mm−1 T = 296 (2) K 0.43 × 0.27 × 0.16 mm

Data collection

Bruker APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.92, T max = 0.96 11829 measured reflections 3416 independent reflections 2675 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.056 wR(F 2) = 0.159 S = 1.06 3416 reflections 214 parameters 4 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.67 e Å−3 Δρmin = −1.05 e Å−3 Data collection: SMART (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808015365/kp2168sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808015365/kp2168Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H10O5·C7H6N2SZ = 2
Mr = 336.36F000 = 352
Triclinic, P1Dx = 1.472 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71073 Å
a = 8.3082 (1) ÅCell parameters from 4303 reflections
b = 9.0428 (1) Åθ = 2.0–27.4º
c = 11.0438 (2) ŵ = 0.24 mm1
α = 67.1546 (8)ºT = 296 (2) K
β = 83.0101 (8)ºBlock, colourless
γ = 86.9193 (9)º0.43 × 0.27 × 0.16 mm
V = 758.93 (2) Å3
Bruker APEXII area-detector diffractometer3416 independent reflections
Radiation source: fine-focus sealed tube2675 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.026
T = 296(2) Kθmax = 27.4º
ω scansθmin = 2.0º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)h = −10→10
Tmin = 0.92, Tmax = 0.96k = −11→11
11829 measured reflectionsl = −14→14
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.056H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.159  w = 1/[σ2(Fo2) + (0.0773P)2 + 0.3994P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max < 0.001
3416 reflectionsΔρmax = 0.67 e Å3
214 parametersΔρmin = −1.05 e Å3
4 restraintsExtinction correction: none
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.41626 (8)0.33690 (10)0.46435 (8)0.0645 (3)
N10.5173 (3)0.4819 (3)0.2070 (3)0.0640 (6)
H1A0.58270.49570.13690.077*
H1B0.43380.54330.20330.077*
N20.6705 (2)0.2670 (2)0.33434 (19)0.0424 (4)
O10.2197 (2)0.5380 (2)−0.00822 (19)0.0616 (5)
O20.28892 (19)1.05947 (19)−0.01033 (17)0.0463 (4)
H20.385 (2)1.090 (4)−0.025 (3)0.069*
O30.1725 (2)0.7920 (2)−0.13815 (17)0.0546 (5)
H30.227 (4)0.770 (4)−0.200 (3)0.082*
O40.40832 (17)0.81995 (19)0.06576 (18)0.0489 (4)
O50.17176 (18)0.58165 (18)0.27645 (15)0.0441 (4)
C10.2856 (2)0.9053 (2)0.0535 (2)0.0354 (4)
C20.1220 (2)0.8368 (2)0.1213 (2)0.0342 (4)
H2A0.04240.92400.10930.041*
C30.1319 (3)0.7405 (3)0.2703 (2)0.0405 (5)
H3A0.20940.78400.30790.049*
C4−0.0397 (3)0.7220 (3)0.3424 (2)0.0486 (6)
H4A−0.10050.82190.31160.058*
H4B−0.03810.68470.43730.058*
C5−0.1091 (3)0.5947 (3)0.3034 (3)0.0498 (6)
H5A−0.13880.49800.38020.060*
H5B−0.20280.63530.25540.060*
C60.0343 (3)0.5643 (3)0.2149 (2)0.0426 (5)
H6A0.03050.46010.20740.051*
C70.0545 (2)0.7055 (3)0.0818 (2)0.0368 (5)
H7A−0.05300.73960.05250.044*
C80.1598 (3)0.6691 (3)−0.0256 (2)0.0416 (5)
C90.5451 (3)0.3664 (3)0.3202 (3)0.0473 (6)
C100.6687 (3)0.1569 (3)0.4631 (2)0.0460 (5)
C110.7797 (4)0.0351 (3)0.5088 (3)0.0623 (7)
H11A0.86950.02430.45360.075*
C120.7536 (5)−0.0717 (4)0.6404 (3)0.0803 (10)
H12A0.8273−0.15470.67380.096*
C130.6181 (5)−0.0553 (4)0.7222 (3)0.0823 (10)
H13A0.6013−0.12940.80890.099*
C140.5100 (5)0.0671 (5)0.6778 (3)0.0788 (9)
H14A0.42080.07780.73350.095*
C150.5351 (3)0.1745 (3)0.5489 (3)0.0571 (5)
U11U22U33U12U13U23
S10.0463 (4)0.0910 (6)0.0724 (5)−0.0114 (3)0.0153 (3)−0.0539 (4)
N10.0493 (12)0.0656 (14)0.0688 (16)0.0157 (10)−0.0021 (11)−0.0202 (12)
N20.0411 (9)0.0464 (10)0.0417 (10)−0.0012 (8)0.0021 (8)−0.0211 (9)
O10.0721 (12)0.0542 (10)0.0538 (11)0.0143 (9)0.0059 (9)−0.0212 (9)
O20.0363 (8)0.0413 (8)0.0499 (10)−0.0046 (6)0.0004 (7)−0.0062 (7)
O30.0684 (11)0.0541 (10)0.0368 (9)0.0106 (8)0.0043 (8)−0.0171 (8)
O40.0303 (7)0.0460 (9)0.0630 (11)0.0003 (6)0.0053 (7)−0.0159 (8)
O50.0379 (8)0.0474 (9)0.0401 (9)0.0018 (6)−0.0035 (6)−0.0098 (7)
C10.0315 (9)0.0389 (10)0.0332 (10)−0.0018 (8)0.0010 (8)−0.0122 (8)
C20.0265 (9)0.0372 (10)0.0373 (11)0.0009 (7)0.0013 (7)−0.0141 (9)
C30.0350 (10)0.0506 (12)0.0368 (11)−0.0064 (9)0.0012 (8)−0.0184 (10)
C40.0433 (12)0.0602 (14)0.0400 (12)−0.0075 (10)0.0110 (9)−0.0205 (11)
C50.0397 (12)0.0591 (14)0.0452 (13)−0.0140 (10)0.0079 (10)−0.0162 (11)
C60.0405 (11)0.0420 (11)0.0440 (12)−0.0060 (9)0.0013 (9)−0.0162 (10)
C70.0296 (9)0.0447 (11)0.0378 (11)−0.0007 (8)−0.0028 (8)−0.0181 (9)
C80.0381 (11)0.0503 (13)0.0394 (12)0.0028 (9)−0.0046 (9)−0.0210 (10)
C90.0367 (11)0.0551 (13)0.0583 (15)−0.0070 (10)0.0065 (10)−0.0335 (12)
C100.0556 (14)0.0478 (12)0.0408 (12)−0.0131 (10)−0.0007 (10)−0.0234 (10)
C110.088 (2)0.0553 (15)0.0482 (15)−0.0018 (14)−0.0140 (14)−0.0224 (12)
C120.129 (3)0.0528 (16)0.062 (2)−0.0111 (18)−0.034 (2)−0.0174 (15)
C130.125 (3)0.083 (2)0.0391 (15)−0.0536 (16)−0.0057 (17)−0.0179 (15)
C140.091 (2)0.104 (2)0.0495 (17)−0.0510 (15)0.0100 (14)−0.0374 (17)
C150.0619 (14)0.0761 (14)0.0439 (14)−0.0314 (9)0.0091 (9)−0.0351 (11)
S1—C151.734 (3)C4—C51.537 (3)
S1—C91.743 (2)C4—H4A0.9700
N1—C91.318 (4)C4—H4B0.9700
N1—H1A0.8600C5—C61.530 (3)
N1—H1B0.8600C5—H5A0.9700
N2—C91.322 (3)C5—H5B0.9700
N2—C101.382 (3)C6—C71.525 (3)
O1—C81.214 (3)C6—H6A0.9800
O2—C11.295 (3)C7—C81.517 (3)
O2—H20.836 (18)C7—H7A0.9800
O3—C81.303 (3)C10—C111.375 (4)
O3—H30.854 (18)C10—C151.413 (3)
O4—C11.234 (2)C11—C121.396 (4)
O5—C31.434 (3)C11—H11A0.9300
O5—C61.443 (3)C12—C131.395 (6)
C1—C21.508 (3)C12—H12A0.9300
C2—C31.544 (3)C13—C141.361 (5)
C2—C71.565 (3)C13—H13A0.9300
C2—H2A0.9800C14—C151.374 (4)
C3—C41.530 (3)C14—H14A0.9300
C3—H3A0.9800
C15—S1—C989.18 (12)O5—C6—C5102.47 (18)
C9—N1—H1A120.0C7—C6—C5110.16 (19)
C9—N1—H1B120.0O5—C6—H6A113.6
H1A—N1—H1B120.0C7—C6—H6A113.6
C9—N2—C10111.49 (19)C5—C6—H6A113.6
C1—O2—H2109 (2)C8—C7—C6114.11 (18)
C8—O3—H3112 (2)C8—C7—C2115.16 (16)
C3—O5—C696.24 (15)C6—C7—C2101.23 (17)
O4—C1—O2123.04 (18)C8—C7—H7A108.7
O4—C1—C2121.43 (18)C6—C7—H7A108.7
O2—C1—C2115.39 (17)C2—C7—H7A108.7
C1—C2—C3110.23 (17)O1—C8—O3124.6 (2)
C1—C2—C7116.64 (16)O1—C8—C7123.1 (2)
C3—C2—C7100.43 (16)O3—C8—C7112.29 (18)
C1—C2—H2A109.7N1—C9—N2123.7 (2)
C3—C2—H2A109.7N1—C9—S1121.07 (18)
C7—C2—H2A109.7N2—C9—S1115.2 (2)
O5—C3—C4103.13 (17)C11—C10—N2125.6 (2)
O5—C3—C2102.91 (16)C11—C10—C15120.4 (2)
C4—C3—C2108.53 (18)N2—C10—C15114.0 (2)
O5—C3—H3A113.7C10—C11—C12118.0 (3)
C4—C3—H3A113.7C10—C11—H11A121.0
C2—C3—H3A113.7C12—C11—H11A121.0
C3—C4—C5101.17 (18)C11—C12—C13120.6 (3)
C3—C4—H4A111.5C11—C12—H12A119.7
C5—C4—H4A111.5C13—C12—H12A119.7
C3—C4—H4B111.5C14—C13—C12121.3 (3)
C5—C4—H4B111.5C14—C13—H13A119.3
H4A—C4—H4B109.4C12—C13—H13A119.3
C6—C5—C4101.63 (17)C13—C14—C15118.7 (3)
C6—C5—H5A111.4C13—C14—H14A120.6
C4—C5—H5A111.4C15—C14—H14A120.6
C6—C5—H5B111.4C14—C15—C10120.9 (3)
C4—C5—H5B111.4C14—C15—S1128.9 (3)
H5A—C5—H5B109.3C10—C15—S1110.1 (2)
O5—C6—C7102.38 (16)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O1i0.862.132.953 (3)161
N1—H1B···O50.862.293.061 (3)150
N1—H1B···O40.862.382.991 (3)128
O2—H2···O4ii0.836 (18)1.868 (18)2.700 (2)174 (3)
O3—H3···N2i0.854 (18)1.758 (19)2.611 (2)176 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O1i0.862.132.953 (3)161
N1—H1B⋯O50.862.293.061 (3)150
N1—H1B⋯O40.862.382.991 (3)128
O2—H2⋯O4ii0.836 (18)1.868 (18)2.700 (2)174 (3)
O3—H3⋯N2i0.854 (18)1.758 (19)2.611 (2)176 (4)

Symmetry codes: (i) ; (ii) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  3 in total

1.  1,3-Benzothia-zol-2-amine.

Authors:  Muhammad Altaf; Helen Stoeckli-Evans
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-18

2.  1,3-Di-4-pyridylpropane-4,4'-oxy-dibenzoic acid (1/1).

Authors:  Guangzhe Li; Chris Salim; Hirofumi Hinode
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-08

3.  Benzothia-zol-2-amine-3-meth-oxy-carbonyl-7-oxabicyclo-[2.2.1]hept-5-ene-2-carb-oxy-lic acid (1/1).

Authors:  Jian Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-18
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.