Literature DB >> 21203135

1,4-Diazo-niabicyclo-[2.2.2]octane bis-(2-chloro-benzoate).

Signe Skovsgaard1, Andrew D Bond.   

Abstract

The title compound, C(6)H(14)N(2) (2+)·2C(7)H(4)ClO(2) (-), contains trimeric units linked by N-H⋯O hydrogen bonds. The carboxyl-ate groups of the 2-chloro-benzoate anions form dihedral angles of 66.1 (1) and 76.1 (1)° with the respective chloro-benzene rings to which they are bound. The hydrogen-bonded trimers are arranged in layers in the (200) planes and the chloro-benzoate anions form edge-to-face inter-actions between layers, with dihedral angles of 61.9 (1) and 49.8 (1)° and centroid-centroid distances of 4.85 (1) and 4.65 (1) Å, respectively, for two crystallographically distinct inter-actions.

Entities:  

Year:  2008        PMID: 21203135      PMCID: PMC2962050          DOI: 10.1107/S1600536808020096

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For other co-crystals of 1,4-diazo­niabicyclo­[2.2.2]octane and carboxylic acids, see: Meehan et al. (1997 ▶); Burchell et al. (2000 ▶); Burchell, Glidewell et al. (2001 ▶); Burchell, Ferguson et al. (2001 ▶). For the crystal structure of 2-chloro­benzoic acid, see: Ferguson & Sim (1961 ▶).

Experimental

Crystal data

C6H14N2 2+·2C7H4ClO2 − M = 425.30 Orthorhombic, a = 19.7694 (12) Å b = 11.3986 (6) Å c = 8.9751 (5) Å V = 2022.5 (2) Å3 Z = 4 Mo Kα radiation μ = 0.35 mm−1 T = 298 (2) K 0.30 × 0.20 × 0.10 mm

Data collection

Bruker–Nonius X8 APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.844, T max = 0.966 21779 measured reflections 3538 independent reflections 3251 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.090 S = 1.06 3538 reflections 253 parameters 1 restraint H-atom parameters constrained Δρmax = 0.26 e Å−3 Δρmin = −0.19 e Å−3 Absolute structure: Flack (1983 ▶), 1629 Friedel pairs Flack parameter: −0.02 (5) Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2003 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808020096/bx2155sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808020096/bx2155Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C6H14N22+·2C7H4ClO2F000 = 888
Mr = 425.30Dx = 1.397 Mg m3
Orthorhombic, Pca21Mo Kα radiation λ = 0.71073 Å
Hall symbol: P 2c -2acCell parameters from 9140 reflections
a = 19.7694 (12) Åθ = 3.1–24.3º
b = 11.3986 (6) ŵ = 0.35 mm1
c = 8.9751 (5) ÅT = 298 (2) K
V = 2022.5 (2) Å3Block, colourless
Z = 40.30 × 0.20 × 0.10 mm
Bruker–Nonius X8 APEXII CCD diffractometer3538 independent reflections
Radiation source: fine-focus sealed tube3251 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.023
T = 298(2) Kθmax = 25.0º
Thin–slice ω and φ scansθmin = 3.6º
Absorption correction: multi-scan(SADABS; Sheldrick, 2003)h = −23→23
Tmin = 0.844, Tmax = 0.966k = −13→12
21779 measured reflectionsl = −10→10
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.033  w = 1/[σ2(Fo2) + (0.0543P)2 + 0.354P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.090(Δ/σ)max = 0.001
S = 1.07Δρmax = 0.26 e Å3
3538 reflectionsΔρmin = −0.19 e Å3
253 parametersExtinction correction: none
1 restraintAbsolute structure: Flack (1983), 1629 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.02 (5)
Secondary atom site location: difference Fourier map
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.58385 (3)1.34004 (5)0.57363 (7)0.05244 (17)
Cl20.41713 (4)0.14065 (6)0.64801 (8)0.0658 (2)
O10.58704 (9)1.03874 (14)0.7359 (2)0.0556 (5)
O20.61776 (12)1.05458 (17)0.5009 (2)0.0716 (6)
O30.43357 (9)0.45727 (15)0.4822 (2)0.0542 (4)
O40.40470 (10)0.42055 (18)0.7161 (2)0.0653 (5)
N10.53241 (8)0.84726 (14)0.6495 (2)0.0351 (4)
H1A0.54740.91920.67830.042*
N20.49115 (9)0.64905 (14)0.5697 (2)0.0383 (4)
H2A0.47600.57710.54100.046*
C10.67102 (10)1.17744 (18)0.6779 (2)0.0357 (4)
C20.66021 (10)1.29512 (17)0.6508 (2)0.0353 (4)
C30.70790 (11)1.3795 (2)0.6867 (3)0.0459 (5)
H3A0.69961.45820.66660.055*
C40.76781 (12)1.3457 (2)0.7524 (3)0.0574 (7)
H4A0.80031.40190.77560.069*
C50.77993 (13)1.2290 (3)0.7838 (3)0.0590 (7)
H5A0.82001.20610.82990.071*
C60.73135 (12)1.1464 (2)0.7456 (3)0.0503 (6)
H6A0.73961.06770.76620.060*
C70.62150 (12)1.08377 (18)0.6306 (3)0.0402 (5)
C80.34750 (10)0.31988 (18)0.5241 (2)0.0349 (4)
C90.34941 (10)0.20060 (18)0.5500 (2)0.0389 (5)
C100.30020 (12)0.1256 (2)0.4960 (3)0.0506 (6)
H10A0.30330.04530.51320.061*
C110.24651 (13)0.1707 (2)0.4167 (3)0.0581 (7)
H11A0.21300.12090.38080.070*
C120.24255 (13)0.2890 (3)0.3909 (3)0.0582 (6)
H12A0.20610.31970.33810.070*
C130.29285 (12)0.3629 (2)0.4434 (3)0.0480 (6)
H13A0.29000.44290.42430.058*
C140.39949 (10)0.40479 (18)0.5813 (3)0.0390 (5)
C150.49080 (17)0.8594 (2)0.5144 (3)0.0643 (7)
H15A0.51580.90180.43870.077*
H15B0.45010.90330.53720.077*
C160.47206 (16)0.7375 (2)0.4566 (3)0.0635 (8)
H16A0.42380.73350.43750.076*
H16B0.49570.72190.36400.076*
C170.49289 (16)0.7947 (2)0.7703 (3)0.0612 (7)
H17A0.45710.84790.80030.073*
H17B0.52180.78070.85570.073*
C180.46232 (14)0.6791 (2)0.7171 (3)0.0584 (7)
H18A0.47240.61730.78810.070*
H18B0.41360.68650.70950.070*
C190.59035 (12)0.7722 (2)0.6143 (4)0.0605 (7)
H19A0.62170.77170.69740.073*
H19B0.61390.80280.52780.073*
C200.56618 (12)0.6470 (2)0.5826 (4)0.0594 (7)
H20A0.58610.61850.49060.071*
H20B0.57980.59510.66280.071*
U11U22U33U12U13U23
Cl10.0553 (3)0.0404 (3)0.0615 (4)0.0067 (2)−0.0201 (3)−0.0033 (3)
Cl20.0831 (5)0.0419 (3)0.0725 (5)0.0129 (3)−0.0271 (4)−0.0006 (3)
O10.0751 (11)0.0435 (10)0.0480 (10)−0.0240 (8)0.0158 (8)−0.0078 (8)
O20.1056 (15)0.0635 (12)0.0456 (10)−0.0416 (11)0.0024 (10)−0.0066 (9)
O30.0660 (10)0.0450 (10)0.0518 (10)−0.0245 (8)0.0108 (8)−0.0083 (8)
O40.0916 (14)0.0583 (12)0.0459 (10)−0.0319 (10)−0.0071 (10)−0.0053 (9)
N10.0452 (10)0.0237 (9)0.0365 (9)−0.0071 (6)0.0028 (8)−0.0031 (8)
N20.0507 (10)0.0275 (9)0.0367 (9)−0.0115 (7)0.0034 (9)−0.0037 (8)
C10.0422 (11)0.0312 (10)0.0339 (10)−0.0038 (8)0.0013 (8)0.0011 (9)
C20.0407 (11)0.0314 (11)0.0339 (10)−0.0006 (8)−0.0050 (9)−0.0029 (9)
C30.0535 (13)0.0293 (11)0.0548 (14)−0.0077 (9)−0.0042 (11)−0.0029 (10)
C40.0486 (14)0.0515 (16)0.0722 (18)−0.0153 (11)−0.0054 (13)−0.0106 (13)
C50.0471 (13)0.0652 (18)0.0646 (16)0.0005 (12)−0.0138 (12)0.0029 (14)
C60.0558 (14)0.0389 (13)0.0563 (15)0.0030 (10)−0.0084 (12)0.0079 (11)
C70.0549 (12)0.0247 (11)0.0410 (12)−0.0012 (9)−0.0017 (10)−0.0003 (9)
C80.0369 (10)0.0334 (11)0.0344 (10)−0.0019 (8)0.0037 (8)0.0010 (9)
C90.0423 (11)0.0347 (11)0.0397 (12)−0.0015 (9)0.0020 (9)−0.0046 (10)
C100.0596 (15)0.0373 (12)0.0549 (14)−0.0141 (11)0.0100 (12)−0.0085 (11)
C110.0412 (12)0.0677 (17)0.0655 (16)−0.0144 (14)−0.0008 (12)−0.0238 (14)
C120.0422 (12)0.0730 (18)0.0593 (14)0.0050 (14)−0.0099 (11)−0.0093 (15)
C130.0540 (13)0.0431 (14)0.0468 (13)0.0025 (11)−0.0040 (11)0.0005 (10)
C140.0458 (11)0.0274 (11)0.0438 (12)−0.0015 (9)−0.0034 (11)−0.0028 (10)
C150.101 (2)0.0358 (14)0.0562 (15)0.0020 (14)−0.0241 (15)0.0025 (12)
C160.091 (2)0.0486 (16)0.0506 (13)−0.0154 (14)−0.0283 (14)0.0028 (12)
C170.0835 (18)0.0515 (15)0.0488 (13)−0.0258 (14)0.0192 (13)−0.0146 (12)
C180.0752 (18)0.0469 (15)0.0530 (14)−0.0230 (13)0.0240 (13)−0.0150 (12)
C190.0451 (13)0.0421 (14)0.094 (2)−0.0066 (10)0.0046 (12)−0.0102 (14)
C200.0556 (14)0.0427 (14)0.0798 (17)0.0033 (11)0.0064 (15)−0.0115 (14)
Cl1—C21.738 (2)C8—C131.390 (3)
Cl2—C91.742 (2)C8—C141.502 (3)
O1—C71.273 (3)C9—C101.383 (3)
O2—C71.213 (3)C10—C111.378 (4)
O3—C141.266 (3)C10—H10A0.930
O4—C141.228 (3)C11—C121.370 (4)
N1—C171.464 (3)C11—H11A0.930
N1—C191.465 (3)C12—C131.386 (4)
N1—C151.472 (3)C12—H12A0.930
N1—H1A0.910C13—H13A0.930
N2—C161.480 (3)C15—C161.529 (4)
N2—C181.480 (3)C15—H15A0.970
N2—C201.488 (3)C15—H15B0.970
N2—H2A0.910C16—H16A0.970
C1—C21.380 (3)C16—H16B0.970
C1—C61.385 (3)C17—C181.526 (3)
C1—C71.509 (3)C17—H17A0.970
C2—C31.385 (3)C17—H17B0.970
C3—C41.378 (4)C18—H18A0.970
C3—H3A0.930C18—H18B0.970
C4—C51.381 (4)C19—C201.531 (3)
C4—H4A0.930C19—H19A0.970
C5—C61.388 (4)C19—H19B0.970
C5—H5A0.930C20—H20A0.970
C6—H6A0.930C20—H20B0.970
C8—C91.380 (3)
C17—N1—C19109.7 (2)C11—C12—C13119.9 (2)
C17—N1—C15110.5 (2)C11—C12—H12A120.0
C19—N1—C15108.3 (2)C13—C12—H12A120.0
C17—N1—H1A109.4C12—C13—C8121.4 (2)
C19—N1—H1A109.4C12—C13—H13A119.3
C15—N1—H1A109.4C8—C13—H13A119.3
C16—N2—C18110.9 (2)O4—C14—O3125.4 (2)
C16—N2—C20108.5 (2)O4—C14—C8119.2 (2)
C18—N2—C20108.6 (2)O3—C14—C8115.4 (2)
C16—N2—H2A109.6N1—C15—C16109.28 (19)
C18—N2—H2A109.6N1—C15—H15A109.8
C20—N2—H2A109.6C16—C15—H15A109.8
C2—C1—C6117.32 (19)N1—C15—H15B109.8
C2—C1—C7122.53 (19)C16—C15—H15B109.8
C6—C1—C7120.10 (19)H15A—C15—H15B108.3
C1—C2—C3121.9 (2)N2—C16—C15108.9 (2)
C1—C2—Cl1119.41 (15)N2—C16—H16A109.9
C3—C2—Cl1118.65 (16)C15—C16—H16A109.9
C4—C3—C2119.4 (2)N2—C16—H16B109.9
C4—C3—H3A120.3C15—C16—H16B109.9
C2—C3—H3A120.3H16A—C16—H16B108.3
C3—C4—C5120.4 (2)N1—C17—C18109.5 (2)
C3—C4—H4A119.8N1—C17—H17A109.8
C5—C4—H4A119.8C18—C17—H17A109.8
C4—C5—C6118.9 (2)N1—C17—H17B109.8
C4—C5—H5A120.6C18—C17—H17B109.8
C6—C5—H5A120.6H17A—C17—H17B108.2
C1—C6—C5122.1 (2)N2—C18—C17109.06 (19)
C1—C6—H6A119.0N2—C18—H18A109.9
C5—C6—H6A119.0C17—C18—H18A109.9
O2—C7—O1124.7 (2)N2—C18—H18B109.9
O2—C7—C1120.2 (2)C17—C18—H18B109.9
O1—C7—C1115.07 (19)H18A—C18—H18B108.3
C9—C8—C13117.1 (2)N1—C19—C20109.92 (18)
C9—C8—C14123.97 (19)N1—C19—H19A109.7
C13—C8—C14118.9 (2)C20—C19—H19A109.7
C8—C9—C10122.1 (2)N1—C19—H19B109.7
C8—C9—Cl2119.51 (16)C20—C19—H19B109.7
C10—C9—Cl2118.36 (18)H19A—C19—H19B108.2
C11—C10—C9119.5 (2)N2—C20—C19108.11 (18)
C11—C10—H10A120.3N2—C20—H20A110.1
C9—C10—H10A120.3C19—C20—H20A110.1
C12—C11—C10119.9 (2)N2—C20—H20B110.1
C12—C11—H11A120.0C19—C20—H20B110.1
C10—C11—H11A120.0H20A—C20—H20B108.4
C6—C1—C2—C31.3 (3)C11—C12—C13—C8−0.7 (4)
C7—C1—C2—C3−176.0 (2)C9—C8—C13—C12−0.2 (3)
C6—C1—C2—Cl1−177.17 (17)C14—C8—C13—C12−178.5 (2)
C7—C1—C2—Cl15.6 (3)C9—C8—C14—O4−65.8 (3)
C1—C2—C3—C4−0.5 (3)C13—C8—C14—O4112.4 (3)
Cl1—C2—C3—C4177.9 (2)C9—C8—C14—O3116.1 (2)
C2—C3—C4—C5−0.8 (4)C13—C8—C14—O3−65.7 (3)
C3—C4—C5—C61.2 (4)C17—N1—C15—C16−65.6 (3)
C2—C1—C6—C5−0.8 (4)C19—N1—C15—C1654.6 (3)
C7—C1—C6—C5176.6 (2)C18—N2—C16—C1552.6 (3)
C4—C5—C6—C1−0.4 (4)C20—N2—C16—C15−66.6 (3)
C2—C1—C7—O275.5 (3)N1—C15—C16—N210.2 (3)
C6—C1—C7—O2−101.7 (3)C19—N1—C17—C18−65.0 (3)
C2—C1—C7—O1−106.1 (2)C15—N1—C17—C1854.4 (3)
C6—C1—C7—O176.7 (3)C16—N2—C18—C17−63.8 (3)
C13—C8—C9—C101.3 (3)C20—N2—C18—C1755.4 (3)
C14—C8—C9—C10179.6 (2)N1—C17—C18—N28.7 (3)
C13—C8—C9—Cl2179.07 (17)C17—N1—C19—C2053.6 (3)
C14—C8—C9—Cl2−2.7 (3)C15—N1—C19—C20−67.1 (3)
C8—C9—C10—C11−1.5 (4)C16—N2—C20—C1954.3 (3)
Cl2—C9—C10—C11−179.29 (19)C18—N2—C20—C19−66.4 (3)
C9—C10—C11—C120.5 (4)N1—C19—C20—N210.7 (3)
C10—C11—C12—C130.5 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O10.911.652.556 (2)170
N2—H2A···O30.911.692.587 (2)169
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O10.911.652.556 (2)170
N2—H2A⋯O30.911.692.587 (2)169
  4 in total

1.  Salts of 3,5-dinitrobenzoic acid with organic diamines: hydrogen-bonded supramolecular structures in one, two and three dimensions.

Authors:  C J Burchell; C Glidewell; A J Lough; G Ferguson
Journal:  Acta Crystallogr B       Date:  2001-04

2.  Threefold interweaving of (4,4) nets built from R(10)10(58) rings inthe hydrogen-bonded adduct 1,4-diazabicyclo

Authors: 
Journal:  Acta Crystallogr C       Date:  2000-09       Impact factor: 1.172

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Hydrated salts of 3,5-dihydroxybenzoic acid with organic diamines: hydrogen-bonded supramolecular structures in two and three dimensions.

Authors:  C J Burchell; G Ferguson; A J Lough; R M Gregson; C Glidewell
Journal:  Acta Crystallogr B       Date:  2001-06-01
  4 in total
  1 in total

1.  Crystal structures of 1,4-di-aza-bicyclo-[2.2.2]octan-1-ium 4-nitro-benzoate dihydrate and 1,4-di-aza-bicyclo-[2.2.2]octane-1,4-diium bis-(4-nitro-benzoate): the influence of solvent upon the stoichiometry of the formed salt.

Authors:  Aina Mardia Akhmad Aznan; Zanariah Abdullah; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-06-23
  1 in total

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