Literature DB >> 21203127

N-(2-Chloro-benzo-yl)-N'-(3-pyrid-yl)thio-urea.

Lan-Qin Chai, Yu-Jie Ding, Xiao-Qing Yang, Hai-Bo Yan, Wen-Kui Dong.   

Abstract

In the mol-ecule of the title compound, C(13)H(10)ClN(3)OS, the dihedral angles between the plane through the thio-urea group and the pyridine and benzene rings are 53.08 (3) and 87.12 (3)°, respectively. The mol-ecules are linked by inter-molecular N-H⋯N hydrogen-bonding inter-actions to form a supra-molecular chain structure along the a axis. An intra-mol-ecular N-H⋯O hydrogen bond is also present.

Entities:  

Year:  2008        PMID: 21203127      PMCID: PMC2962040          DOI: 10.1107/S1600536808019922

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Campo et al. (2002 ▶); Dong et al. (2006 ▶, 2008 ▶); Foss et al. (2004 ▶); Guillon et al. (1996 ▶); Koch (2001 ▶); Krepps et al. (2001 ▶); Su et al. (2004 ▶, 2006 ▶); Teoh et al. (1999 ▶); Venkatachalam et al. (2004 ▶); West et al. (2000 ▶); Xian et al. (2004 ▶).

Experimental

Crystal data

C13H10ClN3OS M = 291.75 Triclinic, a = 8.421 (3) Å b = 9.282 (4) Å c = 10.512 (4) Å α = 98.336 (4)° β = 110.797 (4)° γ = 112.532 (4)° V = 670.9 (5) Å3 Z = 2 Mo Kα radiation μ = 0.43 mm−1 T = 298 (2) K 0.32 × 0.11 × 0.07 mm

Data collection

Bruker SMART 1000 CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.874, T max = 0.972 3504 measured reflections 2319 independent reflections 1734 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.100 S = 1.02 2319 reflections 172 parameters H-atom parameters constrained Δρmax = 0.20 e Å−3 Δρmin = −0.18 e Å−3 Data collection: SMART (Siemens, 1996 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808019922/rz2227sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808019922/rz2227Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H10ClN3OSZ = 2
Mr = 291.75F000 = 300
Triclinic, P1Dx = 1.444 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71073 Å
a = 8.421 (3) ÅCell parameters from 1514 reflections
b = 9.282 (4) Åθ = 2.5–26.6º
c = 10.512 (4) ŵ = 0.43 mm1
α = 98.336 (4)ºT = 298 (2) K
β = 110.797 (4)ºNeedle, colourless
γ = 112.532 (4)º0.32 × 0.11 × 0.07 mm
V = 670.9 (5) Å3
Bruker SMART 1000 CCD area-detector diffractometer2319 independent reflections
Radiation source: fine-focus sealed tube1734 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.019
T = 298(2) Kθmax = 25.0º
φ and ω scansθmin = 2.2º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)h = −10→9
Tmin = 0.874, Tmax = 0.972k = −11→9
3504 measured reflectionsl = −12→9
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.037H-atom parameters constrained
wR(F2) = 0.100  w = 1/[σ2(Fo2) + (0.044P)2 + 0.2146P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
2319 reflectionsΔρmax = 0.20 e Å3
172 parametersΔρmin = −0.18 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.41414 (14)0.64074 (11)0.50918 (8)0.0781 (3)
N10.4306 (3)0.5361 (2)0.1841 (2)0.0397 (5)
H10.30770.49660.14770.048*
N20.6871 (3)0.4903 (2)0.2029 (2)0.0416 (5)
H20.75610.59270.25480.050*
N31.0366 (3)0.3871 (2)0.1394 (2)0.0481 (5)
O10.7112 (3)0.7734 (2)0.3311 (2)0.0630 (5)
S10.33789 (9)0.24252 (8)0.02568 (7)0.0500 (2)
C10.4967 (3)0.4294 (3)0.1432 (2)0.0370 (5)
C20.5364 (4)0.6956 (3)0.2748 (3)0.0422 (6)
C30.4139 (3)0.7708 (3)0.2962 (2)0.0400 (5)
C40.3540 (4)0.7557 (3)0.4027 (3)0.0476 (6)
C50.2449 (4)0.8281 (3)0.4233 (3)0.0560 (7)
H50.20620.81770.49550.067*
C60.1944 (4)0.9154 (3)0.3359 (3)0.0613 (8)
H60.12110.96440.34900.074*
C70.2513 (4)0.9307 (3)0.2296 (3)0.0593 (7)
H70.21570.98950.17050.071*
C80.3611 (4)0.8595 (3)0.2093 (3)0.0495 (6)
H80.39970.87110.13710.059*
C90.9299 (3)0.4610 (3)0.1477 (2)0.0411 (6)
H90.95510.55860.12590.049*
C100.7848 (3)0.3985 (3)0.1872 (2)0.0380 (5)
C110.7442 (4)0.2524 (3)0.2178 (3)0.0481 (6)
H110.64560.20700.24360.058*
C120.8523 (4)0.1757 (3)0.2093 (3)0.0542 (7)
H120.82910.07760.23000.065*
C130.9953 (4)0.2463 (3)0.1697 (3)0.0537 (7)
H131.06740.19300.16360.064*
U11U22U33U12U13U23
Cl10.1271 (8)0.0975 (6)0.0704 (5)0.0861 (6)0.0617 (5)0.0496 (5)
N10.0341 (10)0.0395 (11)0.0488 (11)0.0192 (9)0.0225 (9)0.0076 (9)
N20.0372 (11)0.0368 (10)0.0569 (12)0.0195 (9)0.0271 (10)0.0101 (9)
N30.0439 (12)0.0496 (12)0.0650 (14)0.0268 (10)0.0339 (11)0.0184 (11)
O10.0406 (11)0.0539 (11)0.0758 (13)0.0192 (9)0.0209 (10)−0.0069 (10)
S10.0487 (4)0.0416 (4)0.0571 (4)0.0206 (3)0.0259 (3)0.0051 (3)
C10.0437 (14)0.0408 (13)0.0405 (13)0.0244 (11)0.0273 (11)0.0160 (10)
C20.0426 (15)0.0419 (13)0.0447 (14)0.0219 (12)0.0227 (12)0.0074 (11)
C30.0408 (13)0.0356 (12)0.0459 (14)0.0206 (11)0.0213 (11)0.0071 (11)
C40.0624 (17)0.0491 (14)0.0487 (14)0.0376 (13)0.0297 (13)0.0177 (12)
C50.0712 (19)0.0653 (17)0.0544 (16)0.0448 (16)0.0386 (15)0.0170 (14)
C60.0686 (19)0.0596 (17)0.0696 (19)0.0464 (16)0.0307 (16)0.0129 (15)
C70.0712 (19)0.0516 (16)0.0672 (18)0.0404 (15)0.0291 (16)0.0236 (14)
C80.0577 (16)0.0438 (14)0.0540 (15)0.0264 (13)0.0293 (13)0.0168 (12)
C90.0374 (13)0.0396 (13)0.0515 (14)0.0198 (11)0.0238 (12)0.0142 (11)
C100.0388 (13)0.0410 (13)0.0432 (13)0.0231 (11)0.0236 (11)0.0120 (10)
C110.0507 (15)0.0512 (15)0.0599 (16)0.0269 (13)0.0380 (13)0.0222 (13)
C120.0630 (17)0.0487 (15)0.0750 (18)0.0351 (14)0.0422 (15)0.0300 (14)
C130.0556 (16)0.0537 (16)0.0732 (18)0.0373 (14)0.0378 (15)0.0220 (14)
Cl1—C41.734 (2)C5—C61.372 (4)
N1—C21.368 (3)C5—H50.9300
N1—C11.394 (3)C6—C71.369 (4)
N1—H10.8600C6—H60.9300
N2—C11.331 (3)C7—C81.380 (4)
N2—C101.422 (3)C7—H70.9300
N2—H20.8600C8—H80.9300
N3—C131.335 (3)C9—C101.375 (3)
N3—C91.340 (3)C9—H90.9300
O1—C21.217 (3)C10—C111.381 (3)
S1—C11.659 (2)C11—C121.371 (3)
C2—C31.508 (3)C11—H110.9300
C3—C41.385 (3)C12—C131.373 (3)
C3—C81.386 (3)C12—H120.9300
C4—C51.384 (3)C13—H130.9300
C2—N1—C1128.3 (2)C7—C6—H6119.8
C2—N1—H1115.9C5—C6—H6119.8
C1—N1—H1115.9C6—C7—C8120.5 (2)
C1—N2—C10124.83 (19)C6—C7—H7119.7
C1—N2—H2117.6C8—C7—H7119.7
C10—N2—H2117.6C7—C8—C3120.1 (2)
C13—N3—C9117.2 (2)C7—C8—H8119.9
N2—C1—N1115.4 (2)C3—C8—H8119.9
N2—C1—S1125.54 (17)N3—C9—C10122.6 (2)
N1—C1—S1119.02 (17)N3—C9—H9118.7
O1—C2—N1124.8 (2)C10—C9—H9118.7
O1—C2—C3122.1 (2)C9—C10—C11119.2 (2)
N1—C2—C3113.1 (2)C9—C10—N2119.10 (19)
C4—C3—C8118.6 (2)C11—C10—N2121.6 (2)
C4—C3—C2121.6 (2)C12—C11—C10118.6 (2)
C8—C3—C2119.8 (2)C12—C11—H11120.7
C5—C4—C3121.1 (2)C10—C11—H11120.7
C5—C4—Cl1119.9 (2)C11—C12—C13118.8 (2)
C3—C4—Cl1118.97 (18)C11—C12—H12120.6
C6—C5—C4119.2 (2)C13—C12—H12120.6
C6—C5—H5120.4N3—C13—C12123.6 (2)
C4—C5—H5120.4N3—C13—H13118.2
C7—C6—C5120.4 (2)C12—C13—H13118.2
C10—N2—C1—N1173.77 (19)C4—C5—C6—C70.0 (4)
C10—N2—C1—S1−7.1 (3)C5—C6—C7—C8−0.4 (4)
C2—N1—C1—N21.6 (3)C6—C7—C8—C30.4 (4)
C2—N1—C1—S1−177.58 (18)C4—C3—C8—C70.0 (4)
C1—N1—C2—O13.2 (4)C2—C3—C8—C7−179.1 (2)
C1—N1—C2—C3−178.6 (2)C13—N3—C9—C100.8 (4)
O1—C2—C3—C4−93.6 (3)N3—C9—C10—C11−1.0 (4)
N1—C2—C3—C488.1 (3)N3—C9—C10—N2175.7 (2)
O1—C2—C3—C885.4 (3)C1—N2—C10—C9129.9 (2)
N1—C2—C3—C8−92.8 (3)C1—N2—C10—C11−53.4 (3)
C8—C3—C4—C5−0.4 (4)C9—C10—C11—C120.8 (4)
C2—C3—C4—C5178.7 (2)N2—C10—C11—C12−175.8 (2)
C8—C3—C4—Cl1178.40 (18)C10—C11—C12—C13−0.5 (4)
C2—C3—C4—Cl1−2.5 (3)C9—N3—C13—C12−0.5 (4)
C3—C4—C5—C60.4 (4)C11—C12—C13—N30.4 (4)
Cl1—C4—C5—C6−178.4 (2)
D—H···AD—HH···AD···AD—H···A
N2—H2···O10.861.982.671 (3)137
N1—H1···N3i0.862.082.886 (4)157
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯O10.861.982.671 (3)137
N1—H1⋯N3i0.862.082.886 (4)157

Symmetry code: (i) .

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