| Literature DB >> 21203093 |
Wei Wang1.
Abstract
The title complex, [Mn(C(7)H(6)N(5))(2)(H(2)O)(2)], was obtained by the in situ hydro-thermal reaction of MnCl(2) with 2-(2-pyrid-yl)acetonitrile in the presence of NaN(3). The Mn(II) atom, which is located on an inversion centre, has a distorted octa-hedral coordination geometry formed by two water mol-ecules and two chelating ligands. Inter-molecular hydrogen bonds and π-π inter-actions (3.452 Å) stabilize the crystal structure and lead to the formation of a three-dimensional network.Entities:
Year: 2008 PMID: 21203093 PMCID: PMC2961924 DOI: 10.1107/S1600536808019272
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Mn(C7H6N5)2(H2O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 2050 reflections |
| θ = 2.8–27.5º | |
| µ = 0.86 mm−1 | |
| β = 90.01 (5)º | Prism, colorless |
| 0.20 × 0.12 × 0.12 mm | |
| Rigaku Mercury2) diffractometer | 1836 independent reflections |
| Radiation source: fine-focus sealed tube | 1550 reflections with |
| Monochromator: graphite | |
| Detector resolution: 13.6612 pixels mm-1 | θmax = 27.5º |
| θmin = 3.0º | |
| CCD_Profile_fitting scans | |
| Absorption correction: multi-scan(CrystalClear; Rigaku, 2005) | |
| 8070 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max < 0.001 | |
| 1836 reflections | Δρmax = 0.39 e Å−3 |
| 124 parameters | Δρmin = −0.73 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Mn1 | 0.0000 | 1.0000 | 1.0000 | 0.0261 (3) | |
| N5 | 0.4367 (4) | 0.7962 (2) | 0.8387 (3) | 0.0354 (7) | |
| O1 | 0.2353 (4) | 1.10029 (18) | 0.9172 (3) | 0.0382 (6) | |
| H1B | 0.3241 | 1.1164 | 0.9997 | 0.057* | |
| H1C | 0.1730 | 1.1583 | 0.8792 | 0.057* | |
| N3 | 0.1879 (4) | 0.88112 (19) | 0.9162 (3) | 0.0299 (6) | |
| C7 | 0.1284 (5) | 0.8238 (2) | 0.8048 (4) | 0.0275 (7) | |
| N2 | 0.3843 (4) | 0.8625 (2) | 0.9339 (3) | 0.0346 (7) | |
| N4 | 0.2778 (4) | 0.7701 (2) | 0.7545 (3) | 0.0332 (6) | |
| C6 | −0.0793 (5) | 0.8223 (2) | 0.7415 (4) | 0.0317 (7) | |
| H6A | −0.1720 | 0.8028 | 0.8214 | 0.038* | |
| H6B | −0.0860 | 0.7738 | 0.6614 | 0.038* | |
| C5 | −0.1465 (5) | 0.9175 (2) | 0.6782 (4) | 0.0289 (7) | |
| C4 | −0.2173 (5) | 0.9233 (3) | 0.5316 (4) | 0.0359 (8) | |
| H4A | −0.2262 | 0.8677 | 0.4720 | 0.043* | |
| C3 | −0.2743 (6) | 1.0105 (3) | 0.4737 (4) | 0.0371 (8) | |
| H3A | −0.3202 | 1.0155 | 0.3738 | 0.045* | |
| C2 | −0.2628 (6) | 1.0907 (3) | 0.5649 (4) | 0.0377 (8) | |
| H2A | −0.3022 | 1.1513 | 0.5290 | 0.045* | |
| C1 | −0.1925 (5) | 1.0797 (2) | 0.7089 (4) | 0.0340 (8) | |
| H1A | −0.1832 | 1.1345 | 0.7704 | 0.041* | |
| N1 | −0.1363 (4) | 0.99533 (17) | 0.7671 (3) | 0.0273 (6) |
| Mn1 | 0.0329 (4) | 0.0185 (4) | 0.0270 (4) | 0.0025 (2) | −0.0001 (3) | −0.0016 (2) |
| N5 | 0.0353 (15) | 0.0297 (15) | 0.0413 (16) | 0.0058 (12) | −0.0018 (12) | −0.0047 (12) |
| O1 | 0.0381 (13) | 0.0326 (13) | 0.0439 (14) | −0.0103 (10) | −0.0061 (11) | 0.0116 (11) |
| N3 | 0.0341 (15) | 0.0230 (13) | 0.0326 (14) | 0.0049 (11) | −0.0004 (11) | −0.0030 (11) |
| C7 | 0.0324 (16) | 0.0155 (13) | 0.0345 (16) | 0.0003 (11) | 0.0025 (13) | −0.0007 (12) |
| N2 | 0.0328 (15) | 0.0265 (14) | 0.0446 (16) | 0.0041 (11) | −0.0027 (12) | −0.0019 (12) |
| N4 | 0.0371 (15) | 0.0253 (13) | 0.0371 (16) | 0.0054 (11) | −0.0003 (12) | −0.0037 (12) |
| C6 | 0.0339 (17) | 0.0217 (15) | 0.0395 (17) | −0.0018 (12) | −0.0022 (14) | −0.0058 (13) |
| C5 | 0.0271 (15) | 0.0245 (15) | 0.0349 (17) | −0.0007 (12) | −0.0006 (13) | −0.0032 (13) |
| C4 | 0.0334 (17) | 0.0372 (19) | 0.0373 (18) | 0.0010 (14) | −0.0045 (14) | −0.0081 (15) |
| C3 | 0.0299 (18) | 0.051 (2) | 0.0303 (17) | −0.0013 (14) | −0.0013 (14) | 0.0029 (15) |
| C2 | 0.0399 (19) | 0.0357 (18) | 0.0376 (18) | 0.0039 (15) | −0.0015 (15) | 0.0079 (15) |
| C1 | 0.0417 (19) | 0.0246 (16) | 0.0357 (17) | 0.0038 (13) | 0.0001 (14) | 0.0003 (13) |
| N1 | 0.0289 (14) | 0.0239 (14) | 0.0291 (14) | 0.0009 (9) | 0.0012 (11) | 0.0003 (10) |
| Mn1—N3 | 2.187 (5) | C6—H6A | 0.9700 |
| Mn1—O1 | 2.209 (5) | C6—H6B | 0.9700 |
| Mn1—N1 | 2.235 (3) | C5—N1 | 1.328 (5) |
| N5—N2 | 1.286 (5) | C5—C4 | 1.371 (6) |
| N5—N4 | 1.337 (5) | C4—C3 | 1.359 (6) |
| O1—H1B | 0.9600 | C4—H4A | 0.9300 |
| O1—H1C | 0.9600 | C3—C2 | 1.367 (6) |
| N3—C7 | 1.317 (5) | C3—H3A | 0.9300 |
| N3—N2 | 1.338 (6) | C2—C1 | 1.355 (6) |
| C7—N4 | 1.314 (5) | C2—H2A | 0.9300 |
| C7—C6 | 1.487 (6) | C1—N1 | 1.324 (5) |
| C6—C5 | 1.494 (6) | C1—H1A | 0.9300 |
| N3—Mn1—O1 | 87.43 (11) | C7—C6—H6B | 108.8 |
| N3i—Mn1—O1 | 92.57 (5) | C5—C6—H6B | 108.8 |
| N3—Mn1—N1 | 84.39 (17) | H6A—C6—H6B | 107.7 |
| N3i—Mn1—N1 | 95.61 (17) | N1—C5—C4 | 121.4 (3) |
| O1i—Mn1—N1 | 89.79 (18) | N1—C5—C6 | 118.5 (4) |
| O1—Mn1—N1 | 90.21 (18) | C4—C5—C6 | 120.1 (3) |
| N2—N5—N4 | 109.6 (3) | C3—C4—C5 | 119.9 (3) |
| Mn1—O1—H1B | 109.3 | C3—C4—H4A | 120.1 |
| Mn1—O1—H1C | 109.3 | C5—C4—H4A | 120.1 |
| H1B—O1—H1C | 109.5 | C4—C3—C2 | 118.8 (4) |
| C7—N3—N2 | 105.3 (3) | C4—C3—H3A | 120.6 |
| C7—N3—Mn1 | 121.9 (3) | C2—C3—H3A | 120.6 |
| N2—N3—Mn1 | 131.4 (2) | C1—C2—C3 | 118.3 (4) |
| N3—C7—N4 | 111.1 (3) | C1—C2—H2A | 120.9 |
| N3—C7—C6 | 124.3 (3) | C3—C2—H2A | 120.9 |
| N4—C7—C6 | 124.5 (3) | N1—C1—C2 | 123.7 (3) |
| N5—N2—N3 | 109.0 (3) | N1—C1—H1A | 118.2 |
| C7—N4—N5 | 105.0 (3) | C2—C1—H1A | 118.2 |
| C7—C6—C5 | 113.8 (3) | C1—N1—C5 | 118.0 (4) |
| C7—C6—H6A | 108.8 | C1—N1—Mn1 | 116.2 (2) |
| C5—C6—H6A | 108.8 | C5—N1—Mn1 | 125.5 (2) |
| O1i—Mn1—N3—C7 | 64.4 (3) | C7—C6—C5—C4 | 125.9 (3) |
| O1—Mn1—N3—C7 | −115.6 (3) | N1—C5—C4—C3 | 1.5 (5) |
| N1—Mn1—N3—C7 | −25.2 (3) | C6—C5—C4—C3 | −178.6 (3) |
| O1i—Mn1—N3—N2 | −131.9 (3) | C5—C4—C3—C2 | −1.1 (6) |
| O1—Mn1—N3—N2 | 48.1 (3) | C4—C3—C2—C1 | 0.8 (6) |
| N1—Mn1—N3—N2 | 138.5 (3) | C3—C2—C1—N1 | −0.8 (6) |
| N1i—Mn1—N3—N2 | −41.5 (3) | C2—C1—N1—C5 | 1.1 (5) |
| N2—N3—C7—N4 | 0.8 (4) | C2—C1—N1—Mn1 | 174.6 (3) |
| Mn1—N3—C7—N4 | 168.2 (2) | C4—C5—N1—C1 | −1.5 (5) |
| N2—N3—C7—C6 | −177.6 (3) | C6—C5—N1—C1 | 178.7 (3) |
| Mn1—N3—C7—C6 | −10.2 (4) | C4—C5—N1—Mn1 | −174.3 (2) |
| N4—N5—N2—N3 | 0.7 (4) | C6—C5—N1—Mn1 | 5.9 (4) |
| C7—N3—N2—N5 | −0.9 (4) | N3—Mn1—N1—C1 | −145.1 (3) |
| Mn1—N3—N2—N5 | −166.6 (2) | N3i—Mn1—N1—C1 | 34.9 (3) |
| N3—C7—N4—N5 | −0.3 (4) | O1i—Mn1—N1—C1 | 122.3 (3) |
| C6—C7—N4—N5 | 178.0 (3) | O1—Mn1—N1—C1 | −57.7 (3) |
| N2—N5—N4—C7 | −0.3 (4) | N3—Mn1—N1—C5 | 27.8 (3) |
| N3—C7—C6—C5 | 59.0 (5) | N3i—Mn1—N1—C5 | −152.2 (3) |
| N4—C7—C6—C5 | −119.2 (4) | O1i—Mn1—N1—C5 | −64.8 (3) |
| C7—C6—C5—N1 | −54.2 (4) | O1—Mn1—N1—C5 | 115.2 (3) |
| H··· | ||||
| O1—H1B···N2ii | 0.96 | 2.04 | 2.889 (8) | 146 |
| O1—H1B···N5ii | 0.96 | 2.45 | 3.371 (8) | 162 |
| O1—H1C···N4iii | 0.96 | 1.96 | 2.786 (8) | 142 |
| C6—H6A···N5iv | 0.97 | 2.60 | 3.343 (5) | 133 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.96 | 2.04 | 2.889 (8) | 146 |
| O1—H1 | 0.96 | 2.45 | 3.371 (8) | 162 |
| O1—H1 | 0.96 | 1.96 | 2.786 (8) | 142 |
| C6—H6 | 0.97 | 2.60 | 3.343 (5) | 133 |
Symmetry codes: (i) ; (ii) ; (iii) .