Literature DB >> 21202935

4-Meth-oxy-5-[4-(4-meth-oxy-1,3-benzodioxol-5-yl)perhydro-1H,3H-furo[3,4-c]furan-1-yl]-1,3-benzodioxole.

Rukmani Perumal Ezhilmuthu, Nagarajan Vembu, Nagarajan Sulochana.   

Abstract

The 1,3-benzodioxole ring systems in the title compound, C(22)H(22)O(8), are almost planar. The perhydro-furofuranyl system linking them adopts a distorted double-envelope conformation. Supra-molecular aggregation is effected by C-H⋯O, C-H⋯π and π-π [centroid-centroid distance of 3.755 Å, inter-planar distance of 3.633 Å and dihedral angle of 14.6°] inter-actions.

Entities:  

Year:  2008        PMID: 21202935      PMCID: PMC2961785          DOI: 10.1107/S1600536808018138

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Fu et al. (2006 ▶); Sonar et al. (2006 ▶); Hu et al. (2007 ▶); Zhou et al. (2007 ▶); Liang (2004 ▶); Wang et al. (2004 ▶); Zheng et al. (2005a ▶,b ▶); Hu et al. (2005 ▶); Qi et al. (2006 ▶); Hussain et al. (2006 ▶); Yu et al. (2006 ▶); Zhang et al. (2007 ▶); Betz et al. (2007 ▶); Yin et al. (2007 ▶); Beroza & Barthel (1957 ▶); Mitscher et al. (1979 ▶); Chien & Cheng (1970 ▶); Rao et al. (1981 ▶). For hydrogen bonds, see: Desiraju & Steiner (1999 ▶); Desiraju (1989 ▶). For graph-set notations, see: Bernstein et al. (1995 ▶); Etter (1990 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C22H22O8 M = 414.40 Monoclinic, a = 4.754 (5) Å b = 13.982 (4) Å c = 14.672 (5) Å β = 97.97 (6)° V = 965.8 (10) Å3 Z = 2 Mo Kα radiation μ = 0.11 mm−1 T = 293 (2) K 0.3 × 0.3 × 0.3 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.805, T max = 0.999 2000 measured reflections 1777 independent reflections 1505 reflections with I > 2σ(I) R int = 0.009 2 standard reflections every 100 reflections intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.110 S = 1.05 1777 reflections 272 parameters 1 restraint H-atom parameters constrained Δρmax = 0.20 e Å−3 Δρmin = −0.20 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo,1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2003 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808018138/dn2355sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808018138/dn2355Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C22H22O8F000 = 436
Mr = 414.40Dx = 1.425 Mg m3
Monoclinic, P21Mo Kα radiation λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 25 reflections
a = 4.754 (5) Åθ = 10–14º
b = 13.982 (4) ŵ = 0.11 mm1
c = 14.672 (5) ÅT = 293 (2) K
β = 97.97 (6)ºPrismatic, colorless
V = 965.8 (10) Å30.3 × 0.3 × 0.3 mm
Z = 2
Enraf–Nonius CAD-4 diffractometerRint = 0.009
Radiation source: fine-focus sealed tubeθmax = 25.0º
Monochromator: graphiteθmin = 2.0º
T = 293(2) Kh = 0→5
ω–2θ scansk = 0→16
Absorption correction: ψ scan(North et al., 1968)l = −17→17
Tmin = 0.805, Tmax = 0.9992 standard reflections
2000 measured reflections every 100 reflections
1777 independent reflections intensity decay: none
1505 reflections with I > 2σ(I)
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.040H-atom parameters constrained
wR(F2) = 0.110  w = 1/[σ2(Fo2) + (0.0741P)2 + 0.1102P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
1777 reflectionsΔρmax = 0.20 e Å3
272 parametersΔρmin = −0.20 e Å3
1 restraintExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.015 (4)
Experimental. Psi-scan (North, et al.,1968). Number of psi-scan sets used was 3 Theta correction was applied. Averaged transmission function was used. No Fourier smoothing was applied.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C11.0773 (8)0.1633 (3)1.4216 (2)0.0526 (8)
C21.2921 (8)0.1468 (3)1.4925 (2)0.0561 (9)
C31.4503 (8)0.2198 (3)1.5347 (2)0.0570 (9)
C41.4085 (9)0.3134 (3)1.5089 (3)0.0639 (10)
H41.51870.36271.53760.077*
C51.1918 (8)0.3303 (3)1.4372 (2)0.0573 (9)
H51.15550.39311.41820.069*
C61.0278 (7)0.2588 (2)1.3927 (2)0.0453 (7)
C70.7982 (7)0.2786 (2)1.3134 (2)0.0442 (7)
H70.61630.25571.32940.053*
C80.8479 (6)0.2337 (2)1.2209 (2)0.0427 (7)
H81.04460.21181.22320.051*
C90.7821 (6)0.3148 (2)1.1502 (2)0.0447 (7)
H90.95490.33881.12850.054*
C100.6472 (8)0.3900 (3)1.2056 (2)0.0538 (8)
H10A0.67940.45371.18290.065*
H10B0.44420.37951.20160.065*
C110.6397 (8)0.1550 (3)1.1852 (2)0.0539 (8)
H11A0.73980.10241.16090.065*
H11B0.54360.13081.23460.065*
C120.5768 (6)0.2704 (3)1.0716 (2)0.0464 (7)
H120.43490.31851.04830.056*
C130.7205 (6)0.2343 (2)0.9919 (2)0.0456 (7)
C140.7185 (8)0.1376 (3)0.9672 (2)0.0536 (8)
H140.62410.09441.00040.064*
C150.8500 (8)0.1038 (3)0.8959 (3)0.0589 (9)
H150.84750.03910.88090.071*
C160.9849 (7)0.1695 (3)0.8480 (2)0.0517 (8)
C170.9892 (7)0.2650 (3)0.8700 (2)0.0488 (8)
C180.8592 (8)0.2999 (2)0.9410 (2)0.0477 (8)
C190.7762 (12)0.4613 (3)0.8991 (3)0.0808 (13)
H19A0.79300.52440.92490.121*
H19B0.58120.44880.87540.121*
H19C0.89000.45670.85000.121*
C201.0043 (15)0.0036 (3)1.3671 (4)0.1010 (18)
H20A0.8569−0.03591.33540.151*
H20B1.0690−0.02341.42640.151*
H20C1.15980.00701.33190.151*
C211.6026 (13)0.0854 (4)1.6057 (3)0.0889 (15)
H21A1.55410.06591.66500.107*
H21B1.77490.05221.59560.107*
C221.2286 (9)0.2467 (3)0.7507 (3)0.0673 (11)
H22A1.43410.24670.75510.081*
H22B1.15010.26210.68780.081*
O10.4386 (5)0.19560 (19)1.11427 (16)0.0549 (6)
O20.7797 (5)0.37966 (17)1.29739 (16)0.0551 (6)
O30.8695 (7)0.39473 (18)0.96665 (16)0.0666 (8)
O40.8987 (7)0.0950 (2)1.3780 (2)0.0811 (9)
O51.3775 (8)0.0610 (2)1.5348 (2)0.0890 (10)
O61.6475 (7)0.1843 (3)1.60497 (19)0.0784 (9)
O71.1404 (7)0.3157 (2)0.81173 (18)0.0717 (8)
O81.1315 (7)0.1546 (2)0.77478 (18)0.0698 (8)
U11U22U33U12U13U23
C10.066 (2)0.0420 (19)0.0494 (16)−0.0059 (16)0.0081 (15)−0.0034 (15)
C20.072 (2)0.049 (2)0.0470 (16)0.0097 (18)0.0078 (16)0.0039 (15)
C30.066 (2)0.064 (2)0.0413 (16)0.0050 (18)0.0093 (15)−0.0087 (16)
C40.070 (2)0.060 (2)0.060 (2)−0.0094 (19)0.0025 (18)−0.0160 (18)
C50.072 (2)0.0424 (19)0.0578 (19)−0.0023 (18)0.0101 (17)−0.0048 (16)
C60.0534 (17)0.0396 (18)0.0451 (16)−0.0021 (14)0.0140 (13)−0.0019 (14)
C70.0504 (16)0.0331 (15)0.0510 (17)0.0020 (14)0.0133 (14)−0.0033 (12)
C80.0403 (15)0.0387 (16)0.0506 (17)0.0012 (13)0.0114 (12)−0.0020 (13)
C90.0425 (15)0.0436 (18)0.0485 (16)−0.0009 (14)0.0076 (13)0.0026 (14)
C100.0589 (19)0.0419 (18)0.0607 (19)0.0068 (16)0.0085 (15)0.0016 (15)
C110.0611 (19)0.042 (2)0.0588 (19)−0.0079 (15)0.0077 (16)−0.0042 (15)
C120.0387 (14)0.0482 (18)0.0520 (17)0.0019 (14)0.0055 (13)−0.0007 (15)
C130.0396 (15)0.0458 (18)0.0492 (16)0.0050 (14)−0.0017 (12)−0.0042 (14)
C140.0576 (19)0.0450 (19)0.0572 (18)−0.0077 (16)0.0045 (15)−0.0040 (16)
C150.069 (2)0.0413 (19)0.065 (2)0.0019 (17)0.0010 (18)−0.0112 (16)
C160.0542 (18)0.052 (2)0.0465 (16)0.0090 (16)−0.0004 (14)−0.0085 (15)
C170.0527 (17)0.0468 (19)0.0455 (16)0.0056 (15)0.0018 (13)0.0025 (14)
C180.0589 (18)0.0386 (17)0.0449 (16)0.0080 (14)0.0049 (14)−0.0018 (13)
C190.119 (4)0.043 (2)0.078 (3)0.010 (2)0.006 (3)0.008 (2)
C200.138 (5)0.050 (3)0.106 (4)−0.008 (3)−0.015 (4)−0.011 (2)
C210.112 (4)0.076 (3)0.072 (3)0.026 (3)−0.012 (3)−0.004 (2)
C220.066 (2)0.084 (3)0.054 (2)0.002 (2)0.0141 (17)−0.010 (2)
O10.0417 (10)0.0593 (16)0.0635 (14)−0.0085 (11)0.0067 (10)−0.0018 (12)
O20.0706 (15)0.0394 (12)0.0549 (13)0.0086 (11)0.0078 (12)−0.0048 (10)
O30.109 (2)0.0374 (13)0.0530 (13)0.0118 (14)0.0112 (13)−0.0009 (11)
O40.094 (2)0.0412 (16)0.098 (2)−0.0100 (14)−0.0195 (17)0.0001 (14)
O50.127 (3)0.0578 (18)0.0730 (18)0.0080 (18)−0.0191 (18)0.0092 (15)
O60.0845 (19)0.086 (2)0.0592 (15)0.0131 (17)−0.0101 (14)−0.0071 (15)
O70.100 (2)0.0573 (16)0.0647 (15)0.0025 (15)0.0367 (15)0.0019 (13)
O80.0881 (19)0.0635 (18)0.0603 (15)0.0155 (15)0.0191 (14)−0.0102 (13)
C1—C21.373 (5)C12—H120.9800
C1—O41.375 (5)C13—C141.399 (5)
C1—C61.411 (5)C13—C181.403 (5)
C2—C31.364 (6)C14—C151.374 (5)
C2—O51.385 (5)C14—H140.9300
C3—C41.370 (6)C15—C161.370 (6)
C3—O61.385 (5)C15—H150.9300
C4—C51.387 (6)C16—C171.372 (5)
C4—H40.9300C16—O81.375 (4)
C5—C61.376 (5)C17—C181.373 (5)
C5—H50.9300C17—O71.386 (5)
C6—C71.506 (5)C18—O31.377 (4)
C7—O21.433 (4)C19—O31.387 (5)
C7—C81.544 (4)C19—H19A0.9600
C7—H70.9800C19—H19B0.9600
C8—C111.524 (5)C19—H19C0.9600
C8—C91.539 (4)C20—O41.390 (6)
C8—H80.9800C20—H20A0.9600
C9—C101.525 (5)C20—H20B0.9600
C9—C121.535 (5)C20—H20C0.9600
C9—H90.9800C21—O61.400 (6)
C10—O21.412 (4)C21—O51.426 (6)
C10—H10A0.9700C21—H21A0.9700
C10—H10B0.9700C21—H21B0.9700
C11—O11.430 (5)C22—O71.419 (5)
C11—H11A0.9700C22—O81.428 (6)
C11—H11B0.9700C22—H22A0.9700
C12—O11.425 (4)C22—H22B0.9700
C12—C131.520 (4)
C2—C1—O4125.6 (3)C13—C12—H12108.7
C2—C1—C6117.5 (3)C9—C12—H12108.7
O4—C1—C6116.8 (3)C14—C13—C18118.7 (3)
C3—C2—C1121.6 (3)C14—C13—C12122.2 (3)
C3—C2—O5109.6 (3)C18—C13—C12119.1 (3)
C1—C2—O5128.8 (4)C15—C14—C13122.8 (3)
C2—C3—C4122.7 (3)C15—C14—H14118.6
C2—C3—O6110.1 (4)C13—C14—H14118.6
C4—C3—O6127.2 (4)C16—C15—C14117.0 (3)
C3—C4—C5115.9 (4)C16—C15—H15121.5
C3—C4—H4122.1C14—C15—H15121.5
C5—C4—H4122.1C15—C16—C17121.6 (3)
C6—C5—C4123.3 (4)C15—C16—O8128.6 (3)
C6—C5—H5118.4C17—C16—O8109.8 (3)
C4—C5—H5118.4C16—C17—C18122.1 (3)
C5—C6—C1119.1 (3)C16—C17—O7110.1 (3)
C5—C6—C7122.3 (3)C18—C17—O7127.8 (3)
C1—C6—C7118.6 (3)C17—C18—O3123.2 (3)
O2—C7—C6109.3 (3)C17—C18—C13117.7 (3)
O2—C7—C8105.6 (3)O3—C18—C13119.1 (3)
C6—C7—C8114.9 (3)O3—C19—H19A109.5
O2—C7—H7109.0O3—C19—H19B109.5
C6—C7—H7109.0H19A—C19—H19B109.5
C8—C7—H7109.0O3—C19—H19C109.5
C11—C8—C9103.8 (3)H19A—C19—H19C109.5
C11—C8—C7115.1 (3)H19B—C19—H19C109.5
C9—C8—C7104.6 (2)O4—C20—H20A109.5
C11—C8—H8111.0O4—C20—H20B109.5
C9—C8—H8111.0H20A—C20—H20B109.5
C7—C8—H8111.0O4—C20—H20C109.5
C10—C9—C12114.1 (3)H20A—C20—H20C109.5
C10—C9—C8102.1 (2)H20B—C20—H20C109.5
C12—C9—C8104.9 (3)O6—C21—O5109.3 (4)
C10—C9—H9111.7O6—C21—H21A109.8
C12—C9—H9111.7O5—C21—H21A109.8
C8—C9—H9111.7O6—C21—H21B109.8
O2—C10—C9105.8 (3)O5—C21—H21B109.8
O2—C10—H10A110.6H21A—C21—H21B108.3
C9—C10—H10A110.6O7—C22—O8108.8 (3)
O2—C10—H10B110.6O7—C22—H22A109.9
C9—C10—H10B110.6O8—C22—H22A109.9
H10A—C10—H10B108.7O7—C22—H22B109.9
O1—C11—C8107.4 (3)O8—C22—H22B109.9
O1—C11—H11A110.2H22A—C22—H22B108.3
C8—C11—H11A110.2C12—O1—C11108.0 (2)
O1—C11—H11B110.2C10—O2—C7105.5 (3)
C8—C11—H11B110.2C18—O3—C19117.0 (3)
H11A—C11—H11B108.5C1—O4—C20118.8 (4)
O1—C12—C13112.2 (3)C2—O5—C21105.2 (4)
O1—C12—C9104.5 (2)C3—O6—C21105.7 (3)
C13—C12—C9113.9 (3)C17—O7—C22105.4 (3)
O1—C12—H12108.7C16—O8—C22105.8 (3)
O4—C1—C2—C3−176.8 (4)C9—C12—C13—C18−63.3 (4)
C6—C1—C2—C30.9 (5)C18—C13—C14—C150.9 (5)
O4—C1—C2—O50.5 (6)C12—C13—C14—C15−179.3 (3)
C6—C1—C2—O5178.1 (4)C13—C14—C15—C16−0.5 (5)
C1—C2—C3—C4−0.7 (6)C14—C15—C16—C170.1 (5)
O5—C2—C3—C4−178.5 (4)C14—C15—C16—O8179.8 (3)
C1—C2—C3—O6178.7 (3)C15—C16—C17—C180.0 (5)
O5—C2—C3—O60.9 (4)O8—C16—C17—C18−179.8 (3)
C2—C3—C4—C50.7 (6)C15—C16—C17—O7179.6 (3)
O6—C3—C4—C5−178.6 (3)O8—C16—C17—O7−0.2 (4)
C3—C4—C5—C6−0.8 (6)C16—C17—C18—O3177.5 (3)
C4—C5—C6—C11.0 (5)O7—C17—C18—O3−2.0 (5)
C4—C5—C6—C7−178.5 (3)C16—C17—C18—C130.4 (5)
C2—C1—C6—C5−1.0 (5)O7—C17—C18—C13−179.1 (3)
O4—C1—C6—C5176.9 (3)C14—C13—C18—C17−0.8 (4)
C2—C1—C6—C7178.5 (3)C12—C13—C18—C17179.4 (3)
O4—C1—C6—C7−3.6 (5)C14—C13—C18—O3−178.0 (3)
C5—C6—C7—O2−2.0 (4)C12—C13—C18—O32.2 (4)
C1—C6—C7—O2178.5 (3)C13—C12—O1—C1189.0 (3)
C5—C6—C7—C8116.5 (3)C9—C12—O1—C11−34.9 (3)
C1—C6—C7—C8−63.0 (4)C8—C11—O1—C1229.6 (3)
O2—C7—C8—C11−126.6 (3)C9—C10—O2—C7−42.3 (3)
C6—C7—C8—C11112.9 (3)C6—C7—O2—C10158.5 (3)
O2—C7—C8—C9−13.3 (3)C8—C7—O2—C1034.3 (3)
C6—C7—C8—C9−133.8 (3)C17—C18—O3—C1955.8 (5)
C11—C8—C9—C10110.4 (3)C13—C18—O3—C19−127.2 (4)
C7—C8—C9—C10−10.7 (3)C2—C1—O4—C20−34.0 (6)
C11—C8—C9—C12−9.0 (3)C6—C1—O4—C20148.4 (4)
C7—C8—C9—C12−130.0 (3)C3—C2—O5—C21−0.7 (5)
C12—C9—C10—O2144.6 (3)C1—C2—O5—C21−178.2 (4)
C8—C9—C10—O232.0 (3)O6—C21—O5—C20.2 (6)
C9—C8—C11—O1−11.5 (3)C2—C3—O6—C21−0.8 (5)
C7—C8—C11—O1102.2 (3)C4—C3—O6—C21178.6 (5)
C10—C9—C12—O1−84.5 (3)O5—C21—O6—C30.3 (6)
C8—C9—C12—O126.4 (3)C16—C17—O7—C220.7 (4)
C10—C9—C12—C13152.6 (3)C18—C17—O7—C22−179.7 (3)
C8—C9—C12—C13−96.4 (3)O8—C22—O7—C17−1.0 (4)
O1—C12—C13—C14−1.6 (4)C15—C16—O8—C22179.8 (4)
C9—C12—C13—C14116.9 (4)C17—C16—O8—C22−0.4 (4)
O1—C12—C13—C18178.2 (3)O7—C22—O8—C160.9 (4)
D—H···AD—HH···AD···AD—H···A
C5—H5···O20.932.342.721 (5)104
C9—H9···O30.982.482.997 (4)113
C11—H11B···O40.972.563.042 (5)111
C14—H14···O10.932.452.808 (5)103
C19—H19C···O70.962.413.065 (6)125
C20—H20B···O50.962.332.939 (7)121
C7—H7···Cg5i0.982.863.724148
C22—H22A···Cg6ii0.972.973.646128
Table 1

Selected torsion angles (°)

O2—C7—C8—C9−13.3 (3)
C7—C8—C9—C10−10.7 (3)
C11—C8—C9—C12−9.0 (3)
C8—C9—C10—O232.0 (3)
C9—C8—C11—O1−11.5 (3)
C8—C9—C12—O126.4 (3)
Table 2

Hydrogen-bond geometry (Å, °)

Cg5 is the centroid of the C1–C6 ring and Cg6 is the centroid of the C13—C18 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C5—H5⋯O20.932.342.721 (5)104
C9—H9⋯O30.982.482.997 (4)113
C11—H11B⋯O40.972.563.042 (5)111
C14—H14⋯O10.932.452.808 (5)103
C19—H19C⋯O70.962.413.065 (6)125
C20—H20B⋯O50.962.332.939 (7)121
C7—H7⋯Cg5i0.982.853.724148
C22—H22ACg6ii0.972.973.646128

Symmetry codes: (i) ; (ii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Structural modification of febrifugine. Some methylenedioxy analogs.

Authors:  P L Chien; C C Cheng
Journal:  J Med Chem       Date:  1970-09       Impact factor: 7.446

3.  Quinolone antimicrobial agents. 2. Methylenedioxy positional isomers of oxolinic acid.

Authors:  L A Mitscher; D L Flynn; H E Gracey; S D Drake
Journal:  J Med Chem       Date:  1979-11       Impact factor: 7.446

  3 in total
  1 in total

1.  (1S,4S,5S,8R)-8-Nitro-oxy-2,6-dioxa-bicyclo-[3.3.0]octan-4-yl 3,4,5-triacetoxy-benzoate.

Authors:  Yue Zhang; Ping-An Wang; Meng-Yao Zhang; Xiao-Li Sun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-23
  1 in total

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