Literature DB >> 21202880

[(1S,2S,3R,4R)-3-Hydr-oxy-4,7,7-tri-methyl-bicyclo-[2.2.1]heptan-2-yl]methyl[(E)-3-(trimethyl-silyl)prop-2-enyl]selen-onium bromide.

Hai-Yang Wang, Qiang Zhang, Yi-Zhi Li, Yuan Gui, Zhi-Zhen Huang.   

Abstract

The title compound, a seleno-nium bromide, C(17)H(33)OSeSi(+)·Br(-), was obtained from the reaction of enanti-omerically pure 4,7,7-trimethyl-2-methyl-selanylbicyclo-[2.2.1]heptan-3-ol and (3-bromopropen-yl)trimethyl-silane in acetone. Due to the chiral bicyclic substituent, the crystal structure is not centrosymmetric and has no symmetry plane, with four chiral C atoms in the cation. The asymmetric unit contains one seleno-nium cation and one bromide anion. C-H⋯Br and O-H⋯Br hydrogen bonds link the ions, forming a one-dimensional R-helical chain-like supra-molecular structure.

Entities:  

Year:  2008        PMID: 21202880      PMCID: PMC2961745          DOI: 10.1107/S1600536808016863

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Li et al. (2005 ▶); Goodridge et al. (1988 ▶); Reich et al. (1975 ▶); Ye et al. (2002 ▶).

Experimental

Crystal data

C17H33OSeSiBr M = 440.39 Monoclinic, a = 7.555 (2) Å b = 10.023 (2) Å c = 14.423 (3) Å β = 101.29 (3)° V = 1071.0 (4) Å3 Z = 2 Mo Kα radiation μ = 3.67 mm−1 T = 291 (2) K 0.30 × 0.26 × 0.24 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.35, T max = 0.41 4460 measured reflections 3374 independent reflections 1732 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.102 S = 1.07 3374 reflections 170 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.64 e Å−3 Δρmin = −0.74 e Å−3 Absolute structure: Flack (1983 ▶), 1140 Friedel pairs Flack parameter: 0.01 (2) Data collection: SMART (Bruker, 2000 ▶); cell refinement: SMART; data reduction: SAINT (Bruker, 2000 ▶); program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808016863/im2070sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808016863/im2070Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H33OSeSi+·BrF000 = 452
Mr = 440.39Dx = 1.366 Mg m3
Monoclinic, P2(1)Mo Kα radiation λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 895 reflections
a = 7.555 (2) Åθ = 2.1–24.5º
b = 10.023 (2) ŵ = 3.67 mm1
c = 14.423 (3) ÅT = 291 (2) K
β = 101.29 (3)ºBloc, colourless
V = 1071.0 (4) Å30.30 × 0.26 × 0.24 mm
Z = 2
Bruker SMART Apex CCD diffractometer3374 independent reflections
Radiation source: sealed tube1732 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.035
T = 291(2) Kθmax = 26.0º
phi and ω scansθmin = 1.4º
Absorption correction: multi-scan(SADABS; Bruker, 2000)h = −9→9
Tmin = 0.35, Tmax = 0.41k = 0→12
4460 measured reflectionsl = 0→17
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.053  w = 1/[σ2(Fo2) + (0.046P)2] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.102(Δ/σ)max < 0.001
S = 1.07Δρmax = 0.64 e Å3
3374 reflectionsΔρmin = −0.74 e Å3
170 parametersExtinction correction: none
1 restraintAbsolute structure: Flack (1983), 1140 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.01 (2)
Secondary atom site location: difference Fourier map
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.32321 (7)1.05851 (10)0.09364 (5)0.0584 (2)
C10.6248 (8)0.4347 (6)0.3285 (4)0.0404 (14)
H1A0.63350.34420.30790.061*
H1B0.53630.44000.36790.061*
H1C0.73990.46300.36370.061*
C20.7389 (6)0.5504 (10)0.2095 (4)0.0425 (13)
H2A0.81540.60830.25290.064*
H2B0.70850.59280.14880.064*
H2C0.80130.46830.20360.064*
C30.5706 (8)0.5219 (6)0.2454 (5)0.0498 (18)
C40.4232 (11)0.4559 (8)0.1682 (5)0.0445 (19)
H40.46150.37240.14280.053*
C50.3867 (6)0.5695 (8)0.0960 (4)0.0361 (12)
H50.48220.57100.05880.043*
C60.3996 (9)0.6917 (8)0.1552 (5)0.0398 (16)
H60.49630.74960.14220.048*
C70.4459 (9)0.6398 (7)0.2553 (4)0.0473 (15)
C80.2804 (6)0.5707 (9)0.2761 (4)0.0406 (14)
H8A0.17440.62640.25780.049*
H8B0.29550.54990.34280.049*
C90.2627 (8)0.4411 (7)0.2161 (5)0.0460 (15)
H9A0.27280.36190.25550.055*
H9B0.14990.43840.17040.055*
C100.5215 (9)0.7500 (7)0.3273 (5)0.047
H10A0.64070.77410.31960.071*
H10B0.52620.71750.39030.071*
H10C0.44440.82690.31660.071*
C110.2014 (9)0.3828 (7)−0.0510 (5)0.043
H11A0.30200.3955−0.08160.064*
H11B0.09710.3576−0.09700.064*
H11C0.22940.3137−0.00430.064*
C120.2030 (8)0.6908 (7)−0.0809 (4)0.0415 (15)
H12A0.16830.7780−0.06140.050*
H12B0.33100.6926−0.08200.050*
C130.0925 (8)0.6561 (7)−0.1810 (4)0.0430 (15)
H13−0.03220.6663−0.19180.052*
C140.1643 (8)0.6141 (6)−0.2502 (4)0.0385 (13)
H140.28930.6068−0.23950.046*
C15−0.0572 (9)0.3993 (7)−0.3683 (5)0.047
H15A−0.16960.4027−0.34680.071*
H15B0.02620.3436−0.32670.071*
H15C−0.07710.3631−0.43110.071*
C16−0.1393 (8)0.6949 (7)−0.4057 (5)0.041
H16A−0.20220.6764−0.46890.061*
H16B−0.08370.7813−0.40390.061*
H16C−0.22310.6937−0.36360.061*
C170.1943 (7)0.5796 (7)−0.4543 (4)0.049
H17A0.26310.4987−0.45220.073*
H17B0.27460.6536−0.43720.073*
H17C0.12590.5926−0.51710.073*
O10.2297 (6)0.7626 (5)0.1376 (3)0.0473 (11)
H1D0.248 (10)0.845 (8)0.125 (5)0.057*
Se10.15165 (6)0.54982 (7)0.01059 (4)0.04094 (15)
Si10.03564 (18)0.5673 (2)−0.36882 (11)0.0395 (4)
U11U22U33U12U13U23
Br10.0503 (3)0.0494 (4)0.0775 (5)−0.0034 (4)0.0172 (3)−0.0074 (5)
C10.043 (3)0.043 (4)0.040 (3)0.000 (3)0.020 (3)0.000 (3)
C20.031 (2)0.049 (3)0.043 (3)−0.012 (4)−0.0060 (19)−0.021 (5)
C30.038 (3)0.046 (4)0.053 (4)−0.019 (3)−0.020 (3)0.003 (3)
C40.059 (4)0.038 (4)0.034 (4)−0.005 (3)0.004 (3)0.008 (3)
C50.035 (2)0.037 (3)0.035 (3)0.019 (3)0.0062 (18)0.005 (3)
C60.034 (3)0.048 (4)0.040 (4)−0.005 (3)0.013 (3)0.003 (3)
C70.052 (3)0.047 (3)0.037 (4)0.001 (3)−0.003 (3)0.006 (3)
C80.042 (2)0.049 (4)0.035 (3)0.016 (3)0.017 (2)−0.009 (3)
C90.034 (3)0.046 (4)0.055 (4)−0.004 (3)0.004 (3)0.005 (3)
C100.0490.0490.0490.0000.0210.000
C110.0440.0440.0440.0000.0180.000
C120.039 (3)0.051 (4)0.036 (3)0.020 (3)0.012 (3)0.009 (3)
C130.045 (3)0.048 (4)0.033 (3)0.005 (3)0.002 (3)0.014 (3)
C140.044 (3)0.044 (3)0.029 (3)−0.004 (2)0.012 (2)−0.002 (3)
C150.0490.0490.0490.0000.0210.000
C160.0430.0430.0430.0000.0200.000
C170.0500.0500.0500.0000.0200.000
O10.046 (2)0.049 (3)0.038 (2)−0.010 (2)−0.0126 (19)0.003 (2)
Se10.0358 (2)0.0516 (3)0.0339 (3)0.0028 (4)0.00292 (19)0.0086 (4)
Si10.0420 (7)0.0402 (9)0.0380 (8)0.0077 (9)0.0119 (6)−0.0030 (10)
Br1—O13.143 (5)C10—H10B0.9600
C1—C31.475 (9)C10—H10C0.9600
C1—H1A0.9600C11—Se11.965 (7)
C1—H1B0.9600C11—H11A0.9600
C1—H1C0.9600C11—H11B0.9600
C2—C31.492 (8)C11—H11C0.9600
C2—H2A0.9600C12—C131.560 (9)
C2—H2B0.9600C12—Se12.022 (6)
C2—H2C0.9600C12—H12A0.9700
C3—C71.535 (9)C12—H12B0.9700
C3—C41.559 (9)C13—C141.295 (8)
C4—C91.515 (10)C13—H130.9300
C4—C51.531 (10)C14—Si11.855 (6)
C4—H40.9800C14—H140.9300
C5—C61.484 (10)C15—Si11.825 (7)
C5—Se11.963 (5)C15—H15A0.9600
C5—H50.9800C15—H15B0.9600
C6—O11.446 (8)C15—H15C0.9600
C6—C71.510 (9)C16—Si11.842 (7)
C6—H60.9800C16—H16A0.9600
C7—C81.510 (9)C16—H16B0.9600
C7—C101.546 (9)C16—H16C0.9600
C8—C91.552 (10)C17—Si11.884 (5)
C8—H8A0.9700C17—H17A0.9600
C8—H8B0.9700C17—H17B0.9600
C9—H9A0.9700C17—H17C0.9600
C9—H9B0.9700O1—H1D0.87 (8)
C10—H10A0.9600
C3—C1—H1A109.5C7—C10—H10A109.5
C3—C1—H1B109.5C7—C10—H10B109.5
H1A—C1—H1B109.5H10A—C10—H10B109.5
C3—C1—H1C109.5C7—C10—H10C109.5
H1A—C1—H1C109.5H10A—C10—H10C109.5
H1B—C1—H1C109.5H10B—C10—H10C109.5
C3—C2—H2A109.5Se1—C11—H11A109.5
C3—C2—H2B109.5Se1—C11—H11B109.5
H2A—C2—H2B109.5H11A—C11—H11B109.5
C3—C2—H2C109.5Se1—C11—H11C109.5
H2A—C2—H2C109.5H11A—C11—H11C109.5
H2B—C2—H2C109.5H11B—C11—H11C109.5
C1—C3—C2106.0 (5)C13—C12—Se1108.2 (4)
C1—C3—C7117.3 (6)C13—C12—H12A110.1
C2—C3—C7117.8 (6)Se1—C12—H12A110.1
C1—C3—C4112.0 (5)C13—C12—H12B110.1
C2—C3—C4111.8 (6)Se1—C12—H12B110.1
C7—C3—C491.6 (5)H12A—C12—H12B108.4
C9—C4—C5109.2 (6)C14—C13—C12123.8 (5)
C9—C4—C3103.9 (6)C14—C13—H13118.1
C5—C4—C3100.3 (5)C12—C13—H13118.1
C9—C4—H4114.0C13—C14—Si1124.7 (5)
C5—C4—H4114.0C13—C14—H14117.6
C3—C4—H4114.0Si1—C14—H14117.6
C6—C5—C4103.8 (5)Si1—C15—H15A109.5
C6—C5—Se1113.2 (4)Si1—C15—H15B109.5
C4—C5—Se1111.9 (5)H15A—C15—H15B109.5
C6—C5—H5109.3Si1—C15—H15C109.5
C4—C5—H5109.3H15A—C15—H15C109.5
Se1—C5—H5109.3H15B—C15—H15C109.5
O1—C6—C5110.4 (5)Si1—C16—H16A109.5
O1—C6—C7111.6 (5)Si1—C16—H16B109.5
C5—C6—C7104.1 (6)H16A—C16—H16B109.5
O1—C6—H6110.2Si1—C16—H16C109.5
C5—C6—H6110.2H16A—C16—H16C109.5
C7—C6—H6110.2H16B—C16—H16C109.5
C6—C7—C8107.5 (5)Si1—C17—H17A109.5
C6—C7—C3102.0 (5)Si1—C17—H17B109.5
C8—C7—C3102.2 (5)H17A—C17—H17B109.5
C6—C7—C10112.5 (6)Si1—C17—H17C109.5
C8—C7—C10114.0 (6)H17A—C17—H17C109.5
C3—C7—C10117.4 (5)H17B—C17—H17C109.5
C7—C8—C9105.0 (5)C6—O1—Br1105.8 (4)
C7—C8—H8A110.8C6—O1—H1D109 (5)
C9—C8—H8A110.8C5—Se1—C1198.0 (3)
C7—C8—H8B110.8C5—Se1—C1294.2 (3)
C9—C8—H8B110.8C11—Se1—C12102.9 (3)
H8A—C8—H8B108.8C15—Si1—C16112.8 (3)
C4—C9—C8100.5 (5)C15—Si1—C14111.2 (3)
C4—C9—H9A111.7C16—Si1—C14107.9 (3)
C8—C9—H9A111.7C15—Si1—C17110.9 (3)
C4—C9—H9B111.7C16—Si1—C17106.1 (3)
C8—C9—H9B111.7C14—Si1—C17107.6 (3)
H9A—C9—H9B109.4
D—H···AD—HH···AD···AD—H···A
O1—H1D···Br10.87 (8)2.28 (8)3.143 (5)175 (7)
C5—H5···Br1i0.982.883.827 (5)164
C11—H11C···Br1ii0.962.943.874 (7)165
C12—H12B···Br1i0.972.973.855 (5)152
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1D⋯Br10.87 (8)2.28 (8)3.143 (5)175 (7)
C5—H5⋯Br1i0.982.883.827 (5)164
C11—H11C⋯Br1ii0.962.943.874 (7)165
C12—H12B⋯Br1i0.972.973.855 (5)152

Symmetry codes: (i) ; (ii) .

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