Literature DB >> 21202870

1-Benzyl-2-(4-chloro-phen-yl)-4,5-di-phenyl-1H-imidazole.

Mahmood Ghoranneviss, Ghodsi Mohammadi Ziarani, Alireza Abbasi, Mohammad Reza Hantehzadeh, Zahra Farahani.   

Abstract

The mol-ecular conformation of the title compound, C(28)H(21)ClN(2), is stabilized by an intra-molecular C-H⋯N hydrogen bond. It has many pharmacological properties, such as being an inhibitor of P38 MAP Kinase, and can play an important role in biochemical processes.

Entities:  

Year:  2008        PMID: 21202870      PMCID: PMC2961831          DOI: 10.1107/S1600536808016802

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures and properties, see: Balalaie et al. (2003 ▶); Nagarapu et al. (2007 ▶); Kidwai et al. (2007 ▶).

Experimental

Crystal data

C28H21ClN2 M = 420.92 Triclinic, a = 7.4880 (11) Å b = 9.2711 (16) Å c = 16.049 (3) Å α = 87.169 (13)° β = 76.704 (12)° γ = 87.842 (13)° V = 1082.6 (3) Å3 Z = 2 Mo Kα radiation μ = 0.19 mm−1 T = 290 (2) K 0.3 × 0.2 × 0.2 mm

Data collection

STOE IPDS-II diffractometer Absorption correction: none 8769 measured reflections 4246 independent reflections 2814 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.090 S = 0.94 4246 reflections 288 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.13 e Å−3 Δρmin = −0.20 e Å−3 Data collection: X-AREA (Stoe & Cie, 1997 ▶); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2001 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, 1. DOI: 10.1107/S1600536808016802/bt2715sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808016802/bt2715Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C28H21ClN2Z = 2
Mr = 420.92F000 = 440
Triclinic, P1Dx = 1.291 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71073 Å
a = 7.4880 (11) ÅCell parameters from 6987 reflections
b = 9.2711 (16) Åθ = 1.2–29.8º
c = 16.049 (3) ŵ = 0.19 mm1
α = 87.169 (13)ºT = 290 (2) K
β = 76.704 (12)ºBlock, colorless
γ = 87.842 (13)º0.3 × 0.2 × 0.2 mm
V = 1082.6 (3) Å3
STOE IPDS-II diffractometer2814 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.034
Monochromator: graphiteθmax = 26.0º
T = 290(2) Kθmin = 2.2º
Area detector – phi oscillation scansh = −9→9
Absorption correction: nonek = −11→10
8769 measured reflectionsl = −19→19
4246 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.041H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.090  w = 1/[σ2(Fo2) + (0.0457P)2] where P = (Fo2 + 2Fc2)/3
S = 0.94(Δ/σ)max < 0.001
4246 reflectionsΔρmax = 0.13 e Å3
288 parametersΔρmin = −0.20 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.17061 (7)0.52946 (7)0.32233 (4)0.0741 (2)
N10.60096 (17)0.82368 (15)0.59681 (9)0.0412 (3)
N20.36337 (17)0.74456 (15)0.69583 (8)0.0403 (3)
C10.2919 (2)0.56492 (19)0.54889 (12)0.0456 (4)
H10.28040.50960.59970.055*
C20.4446 (2)0.75675 (17)0.61039 (10)0.0393 (4)
C30.9378 (2)0.9430 (2)0.61528 (12)0.0476 (4)
H30.93700.89590.56560.057*
C40.7878 (2)0.93196 (18)0.68467 (11)0.0413 (4)
C50.4409 (2)0.80553 (19)0.83352 (11)0.0419 (4)
C60.2487 (2)0.5939 (2)0.40748 (12)0.0492 (5)
C70.2308 (2)0.5117 (2)0.48201 (12)0.0491 (4)
H70.17840.42130.48740.059*
C80.6244 (2)0.85566 (17)0.67670 (10)0.0391 (4)
C90.4790 (2)0.80756 (18)0.73880 (11)0.0398 (4)
C100.1795 (2)0.55784 (19)0.79077 (11)0.0435 (4)
C110.3703 (2)0.69955 (18)0.54181 (11)0.0399 (4)
C120.3880 (2)0.77975 (19)0.46497 (11)0.0475 (4)
H120.44180.86960.45870.057*
C130.5348 (3)0.7078 (2)0.87682 (12)0.0567 (5)
H130.61780.64160.84630.068*
C140.3263 (3)0.7273 (2)0.39788 (12)0.0530 (5)
H140.33730.78170.34680.064*
C151.0919 (3)1.0925 (2)0.69172 (14)0.0607 (5)
H151.19211.14720.69390.073*
C160.1802 (2)0.6943 (2)0.73629 (12)0.0440 (4)
H16A0.114 (2)0.6806 (18)0.6900 (11)0.046 (5)*
H16B0.114 (2)0.7692 (19)0.7710 (11)0.046 (5)*
C171.0877 (2)1.0226 (2)0.61875 (13)0.0550 (5)
H171.18631.02900.57150.066*
C180.0320 (3)0.5323 (2)0.85851 (13)0.0625 (5)
H18−0.06390.60030.87040.075*
C190.1645 (4)0.3071 (3)0.89254 (17)0.0854 (8)
H190.15960.22260.92670.102*
C200.7963 (2)1.0024 (2)0.75824 (12)0.0505 (4)
H200.69880.99630.80600.061*
C210.3165 (3)0.9005 (2)0.88092 (12)0.0577 (5)
H210.25030.96620.85330.069*
C220.2891 (3)0.8988 (3)0.96904 (13)0.0699 (6)
H220.20460.96331.00030.084*
C230.9463 (3)1.0807 (2)0.76139 (13)0.0604 (5)
H230.94951.12630.81130.072*
C240.3199 (3)0.4554 (2)0.77506 (13)0.0557 (5)
H240.42080.47060.72980.067*
C250.3117 (4)0.3305 (3)0.82608 (17)0.0747 (6)
H250.40720.26210.81500.090*
C260.3851 (3)0.8033 (3)1.01068 (13)0.0680 (6)
H260.36760.80371.06990.082*
C270.5065 (3)0.7074 (3)0.96484 (14)0.0688 (6)
H270.57080.64120.99310.083*
C280.0251 (4)0.4068 (3)0.90890 (15)0.0820 (7)
H28−0.07550.39050.95420.098*
U11U22U33U12U13U23
Cl10.0667 (3)0.1008 (5)0.0631 (3)−0.0114 (3)−0.0247 (3)−0.0313 (3)
N10.0440 (7)0.0441 (8)0.0370 (8)−0.0063 (6)−0.0110 (6)−0.0032 (6)
N20.0392 (7)0.0453 (8)0.0374 (8)−0.0061 (6)−0.0101 (6)−0.0014 (6)
C10.0421 (9)0.0474 (11)0.0493 (10)−0.0038 (8)−0.0142 (8)−0.0024 (8)
C20.0399 (8)0.0402 (10)0.0396 (9)−0.0009 (7)−0.0126 (7)−0.0028 (7)
C30.0473 (9)0.0531 (11)0.0429 (10)−0.0051 (8)−0.0102 (8)−0.0057 (8)
C40.0445 (9)0.0407 (10)0.0407 (9)−0.0038 (7)−0.0136 (7)−0.0021 (7)
C50.0408 (8)0.0473 (10)0.0383 (9)−0.0095 (7)−0.0096 (7)0.0000 (8)
C60.0400 (9)0.0621 (13)0.0497 (11)0.0020 (8)−0.0156 (8)−0.0205 (9)
C70.0400 (9)0.0491 (11)0.0598 (12)−0.0063 (8)−0.0124 (8)−0.0105 (9)
C80.0427 (8)0.0372 (9)0.0384 (9)−0.0002 (7)−0.0109 (7)−0.0040 (7)
C90.0401 (8)0.0419 (9)0.0394 (9)−0.0012 (7)−0.0128 (7)−0.0033 (7)
C100.0417 (9)0.0516 (11)0.0402 (10)−0.0117 (8)−0.0136 (8)−0.0035 (8)
C110.0366 (8)0.0437 (10)0.0404 (9)0.0010 (7)−0.0100 (7)−0.0064 (8)
C120.0558 (10)0.0434 (11)0.0443 (10)−0.0058 (8)−0.0122 (8)−0.0055 (8)
C130.0580 (11)0.0655 (13)0.0497 (12)0.0048 (9)−0.0196 (9)−0.0046 (10)
C140.0636 (11)0.0563 (12)0.0419 (10)0.0011 (9)−0.0174 (9)−0.0059 (9)
C150.0520 (10)0.0654 (13)0.0692 (14)−0.0171 (9)−0.0200 (10)−0.0062 (11)
C160.0337 (8)0.0529 (11)0.0454 (10)−0.0023 (8)−0.0083 (8)−0.0041 (9)
C170.0450 (10)0.0636 (13)0.0551 (12)−0.0105 (9)−0.0080 (9)−0.0002 (10)
C180.0561 (11)0.0763 (15)0.0532 (12)−0.0186 (10)−0.0061 (9)−0.0019 (11)
C190.140 (2)0.0633 (16)0.0644 (16)−0.0376 (17)−0.0452 (17)0.0139 (13)
C200.0515 (10)0.0560 (12)0.0443 (10)−0.0104 (8)−0.0088 (8)−0.0082 (9)
C210.0628 (11)0.0599 (13)0.0483 (11)0.0059 (10)−0.0092 (9)−0.0034 (9)
C220.0746 (14)0.0808 (16)0.0480 (13)0.0019 (12)0.0005 (11)−0.0138 (11)
C230.0634 (12)0.0680 (13)0.0554 (12)−0.0141 (10)−0.0206 (10)−0.0166 (10)
C240.0565 (11)0.0577 (13)0.0543 (12)−0.0039 (9)−0.0161 (9)0.0028 (10)
C250.0997 (17)0.0578 (14)0.0771 (16)−0.0012 (12)−0.0425 (14)0.0001 (12)
C260.0800 (14)0.0880 (17)0.0359 (11)−0.0195 (12)−0.0106 (10)0.0004 (11)
C270.0821 (14)0.0792 (16)0.0513 (13)−0.0035 (12)−0.0298 (11)0.0076 (11)
C280.0988 (18)0.092 (2)0.0522 (14)−0.0498 (16)−0.0062 (12)0.0070 (13)
Cl1—C61.7436 (17)C13—C271.379 (3)
N1—C21.314 (2)C13—H130.9300
N1—C81.381 (2)C14—H140.9300
N2—C21.367 (2)C15—C171.373 (3)
N2—C91.385 (2)C15—C231.374 (3)
N2—C161.459 (2)C15—H150.9300
C1—C71.378 (2)C16—H16A1.000 (18)
C1—C111.388 (2)C16—H16B0.960 (17)
C1—H10.9300C17—H170.9300
C2—C111.471 (2)C18—C281.379 (3)
C3—C171.380 (2)C18—H180.9300
C3—C41.391 (2)C19—C281.356 (4)
C3—H30.9300C19—C251.362 (4)
C4—C201.392 (2)C19—H190.9300
C4—C81.470 (2)C20—C231.372 (3)
C5—C211.378 (2)C20—H200.9300
C5—C131.383 (3)C21—C221.381 (3)
C5—C91.480 (2)C21—H210.9300
C6—C71.369 (3)C22—C261.364 (3)
C6—C141.373 (3)C22—H220.9300
C7—H70.9300C23—H230.9300
C8—C91.368 (2)C24—C251.380 (3)
C10—C241.377 (2)C24—H240.9300
C10—C181.378 (3)C25—H250.9300
C10—C161.501 (3)C26—C271.362 (3)
C11—C121.390 (2)C26—H260.9300
C12—C141.381 (2)C27—H270.9300
C12—H120.9300C28—H280.9300
C2—N1—C8105.97 (13)C17—C15—C23119.26 (17)
C2—N2—C9106.82 (13)C17—C15—H15120.4
C2—N2—C16128.26 (14)C23—C15—H15120.4
C9—N2—C16124.44 (14)N2—C16—C10114.03 (14)
C7—C1—C11121.22 (18)N2—C16—H16A107.8 (10)
C7—C1—H1119.4C10—C16—H16A110.3 (10)
C11—C1—H1119.4N2—C16—H16B108.6 (10)
N1—C2—N2111.47 (14)C10—C16—H16B109.0 (10)
N1—C2—C11123.73 (15)H16A—C16—H16B106.7 (13)
N2—C2—C11124.79 (14)C15—C17—C3120.22 (17)
C17—C3—C4121.31 (16)C15—C17—H17119.9
C17—C3—H3119.3C3—C17—H17119.9
C4—C3—H3119.3C10—C18—C28120.7 (2)
C3—C4—C20117.33 (16)C10—C18—H18119.7
C3—C4—C8119.95 (15)C28—C18—H18119.7
C20—C4—C8122.61 (15)C28—C19—C25120.0 (2)
C21—C5—C13118.12 (17)C28—C19—H19120.0
C21—C5—C9122.19 (16)C25—C19—H19120.0
C13—C5—C9119.68 (15)C23—C20—C4121.03 (17)
C7—C6—C14121.57 (17)C23—C20—H20119.5
C7—C6—Cl1119.75 (15)C4—C20—H20119.5
C14—C6—Cl1118.69 (16)C5—C21—C22120.6 (2)
C6—C7—C1118.92 (17)C5—C21—H21119.7
C6—C7—H7120.5C22—C21—H21119.7
C1—C7—H7120.5C26—C22—C21120.6 (2)
C9—C8—N1109.98 (14)C26—C22—H22119.7
C9—C8—C4129.88 (15)C21—C22—H22119.7
N1—C8—C4120.14 (14)C20—C23—C15120.83 (18)
C8—C9—N2105.76 (14)C20—C23—H23119.6
C8—C9—C5132.19 (15)C15—C23—H23119.6
N2—C9—C5121.91 (14)C10—C24—C25120.4 (2)
C24—C10—C18118.34 (19)C10—C24—H24119.8
C24—C10—C16122.53 (16)C25—C24—H24119.8
C18—C10—C16119.12 (17)C19—C25—C24120.3 (2)
C1—C11—C12118.42 (16)C19—C25—H25119.8
C1—C11—C2122.62 (16)C24—C25—H25119.8
C12—C11—C2118.87 (15)C27—C26—C22119.51 (19)
C14—C12—C11120.65 (17)C27—C26—H26120.2
C14—C12—H12119.7C22—C26—H26120.2
C11—C12—H12119.7C26—C27—C13120.5 (2)
C27—C13—C5120.73 (19)C26—C27—H27119.8
C27—C13—H13119.6C13—C27—H27119.8
C5—C13—H13119.6C19—C28—C18120.2 (2)
C6—C14—C12119.22 (18)C19—C28—H28119.9
C6—C14—H14120.4C18—C28—H28119.9
C12—C14—H14120.4
C8—N1—C2—N20.58 (18)N1—C2—C11—C12−39.5 (2)
C8—N1—C2—C11−178.04 (15)N2—C2—C11—C12142.03 (17)
C9—N2—C2—N1−0.62 (19)C1—C11—C12—C140.9 (2)
C16—N2—C2—N1171.59 (15)C2—C11—C12—C14177.51 (15)
C9—N2—C2—C11177.97 (15)C21—C5—C13—C27−1.1 (3)
C16—N2—C2—C11−9.8 (3)C9—C5—C13—C27177.59 (18)
C17—C3—C4—C20−1.0 (3)C7—C6—C14—C120.0 (3)
C17—C3—C4—C8175.34 (17)Cl1—C6—C14—C12179.73 (13)
C14—C6—C7—C10.3 (3)C11—C12—C14—C6−0.6 (3)
Cl1—C6—C7—C1−179.45 (12)C2—N2—C16—C10115.85 (19)
C11—C1—C7—C60.1 (2)C9—N2—C16—C10−73.2 (2)
C2—N1—C8—C9−0.31 (18)C24—C10—C16—N2−28.4 (2)
C2—N1—C8—C4−179.85 (15)C18—C10—C16—N2152.54 (16)
C3—C4—C8—C9165.88 (18)C23—C15—C17—C30.8 (3)
C20—C4—C8—C9−17.9 (3)C4—C3—C17—C150.3 (3)
C3—C4—C8—N1−14.7 (2)C24—C10—C18—C28−0.3 (3)
C20—C4—C8—N1161.51 (16)C16—C10—C18—C28178.75 (18)
N1—C8—C9—N2−0.06 (18)C3—C4—C20—C230.7 (3)
C4—C8—C9—N2179.42 (16)C8—C4—C20—C23−175.60 (17)
N1—C8—C9—C5175.61 (17)C13—C5—C21—C220.9 (3)
C4—C8—C9—C5−4.9 (3)C9—C5—C21—C22−177.70 (18)
C2—N2—C9—C80.40 (18)C5—C21—C22—C260.1 (3)
C16—N2—C9—C8−172.20 (15)C4—C20—C23—C150.4 (3)
C2—N2—C9—C5−175.82 (15)C17—C15—C23—C20−1.2 (3)
C16—N2—C9—C511.6 (2)C18—C10—C24—C250.1 (3)
C21—C5—C9—C8105.1 (2)C16—C10—C24—C25−178.92 (18)
C13—C5—C9—C8−73.6 (3)C28—C19—C25—C24−0.1 (3)
C21—C5—C9—N2−79.8 (2)C10—C24—C25—C190.1 (3)
C13—C5—C9—N2101.5 (2)C21—C22—C26—C27−1.1 (3)
C7—C1—C11—C12−0.7 (2)C22—C26—C27—C130.9 (3)
C7—C1—C11—C2−177.10 (14)C5—C13—C27—C260.2 (3)
N1—C2—C11—C1136.88 (17)C25—C19—C28—C18−0.1 (4)
N2—C2—C11—C1−41.5 (2)C10—C18—C28—C190.3 (3)
D—H···AD—HH···AD···AD—H···A
C3—H3···N10.932.562.874 (2)100
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3⋯N10.932.562.874 (2)100
  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  1 in total

1.  Crystal structure of 1-[2-(4-chloro-phen-yl)-4,5-diphenyl-1H-imidazol-1-yl]propan-2-ol.

Authors:  Shaaban K Mohamed; Adel A Marzouk; Mustafa R Albayati; Antar A Abdelhamid; Jim Simpson
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2017-01-01
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.