| Literature DB >> 21202870 |
Mahmood Ghoranneviss, Ghodsi Mohammadi Ziarani, Alireza Abbasi, Mohammad Reza Hantehzadeh, Zahra Farahani.
Abstract
The mol-ecular conformation of the title compound, C(28)H(21)ClN(2), is stabilized by an intra-molecular C-H⋯N hydrogen bond. It has many pharmacological properties, such as being an inhibitor of P38 MAP Kinase, and can play an important role in biochemical processes.Entities:
Year: 2008 PMID: 21202870 PMCID: PMC2961831 DOI: 10.1107/S1600536808016802
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C28H21ClN2 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 6987 reflections | |
| θ = 1.2–29.8º | |
| µ = 0.19 mm−1 | |
| α = 87.169 (13)º | |
| β = 76.704 (12)º | Block, colorless |
| γ = 87.842 (13)º | 0.3 × 0.2 × 0.2 mm |
| STOE IPDS-II diffractometer | 2814 reflections with |
| Radiation source: fine-focus sealed tube | |
| Monochromator: graphite | θmax = 26.0º |
| θmin = 2.2º | |
| Area detector – phi oscillation scans | |
| Absorption correction: none | |
| 8769 measured reflections | |
| 4246 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max < 0.001 | |
| 4246 reflections | Δρmax = 0.13 e Å−3 |
| 288 parameters | Δρmin = −0.20 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.17061 (7) | 0.52946 (7) | 0.32233 (4) | 0.0741 (2) | |
| N1 | 0.60096 (17) | 0.82368 (15) | 0.59681 (9) | 0.0412 (3) | |
| N2 | 0.36337 (17) | 0.74456 (15) | 0.69583 (8) | 0.0403 (3) | |
| C1 | 0.2919 (2) | 0.56492 (19) | 0.54889 (12) | 0.0456 (4) | |
| H1 | 0.2804 | 0.5096 | 0.5997 | 0.055* | |
| C2 | 0.4446 (2) | 0.75675 (17) | 0.61039 (10) | 0.0393 (4) | |
| C3 | 0.9378 (2) | 0.9430 (2) | 0.61528 (12) | 0.0476 (4) | |
| H3 | 0.9370 | 0.8959 | 0.5656 | 0.057* | |
| C4 | 0.7878 (2) | 0.93196 (18) | 0.68467 (11) | 0.0413 (4) | |
| C5 | 0.4409 (2) | 0.80553 (19) | 0.83352 (11) | 0.0419 (4) | |
| C6 | 0.2487 (2) | 0.5939 (2) | 0.40748 (12) | 0.0492 (5) | |
| C7 | 0.2308 (2) | 0.5117 (2) | 0.48201 (12) | 0.0491 (4) | |
| H7 | 0.1784 | 0.4213 | 0.4874 | 0.059* | |
| C8 | 0.6244 (2) | 0.85566 (17) | 0.67670 (10) | 0.0391 (4) | |
| C9 | 0.4790 (2) | 0.80756 (18) | 0.73880 (11) | 0.0398 (4) | |
| C10 | 0.1795 (2) | 0.55784 (19) | 0.79077 (11) | 0.0435 (4) | |
| C11 | 0.3703 (2) | 0.69955 (18) | 0.54181 (11) | 0.0399 (4) | |
| C12 | 0.3880 (2) | 0.77975 (19) | 0.46497 (11) | 0.0475 (4) | |
| H12 | 0.4418 | 0.8696 | 0.4587 | 0.057* | |
| C13 | 0.5348 (3) | 0.7078 (2) | 0.87682 (12) | 0.0567 (5) | |
| H13 | 0.6178 | 0.6416 | 0.8463 | 0.068* | |
| C14 | 0.3263 (3) | 0.7273 (2) | 0.39788 (12) | 0.0530 (5) | |
| H14 | 0.3373 | 0.7817 | 0.3468 | 0.064* | |
| C15 | 1.0919 (3) | 1.0925 (2) | 0.69172 (14) | 0.0607 (5) | |
| H15 | 1.1921 | 1.1472 | 0.6939 | 0.073* | |
| C16 | 0.1802 (2) | 0.6943 (2) | 0.73629 (12) | 0.0440 (4) | |
| H16A | 0.114 (2) | 0.6806 (18) | 0.6900 (11) | 0.046 (5)* | |
| H16B | 0.114 (2) | 0.7692 (19) | 0.7710 (11) | 0.046 (5)* | |
| C17 | 1.0877 (2) | 1.0226 (2) | 0.61875 (13) | 0.0550 (5) | |
| H17 | 1.1863 | 1.0290 | 0.5715 | 0.066* | |
| C18 | 0.0320 (3) | 0.5323 (2) | 0.85851 (13) | 0.0625 (5) | |
| H18 | −0.0639 | 0.6003 | 0.8704 | 0.075* | |
| C19 | 0.1645 (4) | 0.3071 (3) | 0.89254 (17) | 0.0854 (8) | |
| H19 | 0.1596 | 0.2226 | 0.9267 | 0.102* | |
| C20 | 0.7963 (2) | 1.0024 (2) | 0.75824 (12) | 0.0505 (4) | |
| H20 | 0.6988 | 0.9963 | 0.8060 | 0.061* | |
| C21 | 0.3165 (3) | 0.9005 (2) | 0.88092 (12) | 0.0577 (5) | |
| H21 | 0.2503 | 0.9662 | 0.8533 | 0.069* | |
| C22 | 0.2891 (3) | 0.8988 (3) | 0.96904 (13) | 0.0699 (6) | |
| H22 | 0.2046 | 0.9633 | 1.0003 | 0.084* | |
| C23 | 0.9463 (3) | 1.0807 (2) | 0.76139 (13) | 0.0604 (5) | |
| H23 | 0.9495 | 1.1263 | 0.8113 | 0.072* | |
| C24 | 0.3199 (3) | 0.4554 (2) | 0.77506 (13) | 0.0557 (5) | |
| H24 | 0.4208 | 0.4706 | 0.7298 | 0.067* | |
| C25 | 0.3117 (4) | 0.3305 (3) | 0.82608 (17) | 0.0747 (6) | |
| H25 | 0.4072 | 0.2621 | 0.8150 | 0.090* | |
| C26 | 0.3851 (3) | 0.8033 (3) | 1.01068 (13) | 0.0680 (6) | |
| H26 | 0.3676 | 0.8037 | 1.0699 | 0.082* | |
| C27 | 0.5065 (3) | 0.7074 (3) | 0.96484 (14) | 0.0688 (6) | |
| H27 | 0.5708 | 0.6412 | 0.9931 | 0.083* | |
| C28 | 0.0251 (4) | 0.4068 (3) | 0.90890 (15) | 0.0820 (7) | |
| H28 | −0.0755 | 0.3905 | 0.9542 | 0.098* |
| Cl1 | 0.0667 (3) | 0.1008 (5) | 0.0631 (3) | −0.0114 (3) | −0.0247 (3) | −0.0313 (3) |
| N1 | 0.0440 (7) | 0.0441 (8) | 0.0370 (8) | −0.0063 (6) | −0.0110 (6) | −0.0032 (6) |
| N2 | 0.0392 (7) | 0.0453 (8) | 0.0374 (8) | −0.0061 (6) | −0.0101 (6) | −0.0014 (6) |
| C1 | 0.0421 (9) | 0.0474 (11) | 0.0493 (10) | −0.0038 (8) | −0.0142 (8) | −0.0024 (8) |
| C2 | 0.0399 (8) | 0.0402 (10) | 0.0396 (9) | −0.0009 (7) | −0.0126 (7) | −0.0028 (7) |
| C3 | 0.0473 (9) | 0.0531 (11) | 0.0429 (10) | −0.0051 (8) | −0.0102 (8) | −0.0057 (8) |
| C4 | 0.0445 (9) | 0.0407 (10) | 0.0407 (9) | −0.0038 (7) | −0.0136 (7) | −0.0021 (7) |
| C5 | 0.0408 (8) | 0.0473 (10) | 0.0383 (9) | −0.0095 (7) | −0.0096 (7) | 0.0000 (8) |
| C6 | 0.0400 (9) | 0.0621 (13) | 0.0497 (11) | 0.0020 (8) | −0.0156 (8) | −0.0205 (9) |
| C7 | 0.0400 (9) | 0.0491 (11) | 0.0598 (12) | −0.0063 (8) | −0.0124 (8) | −0.0105 (9) |
| C8 | 0.0427 (8) | 0.0372 (9) | 0.0384 (9) | −0.0002 (7) | −0.0109 (7) | −0.0040 (7) |
| C9 | 0.0401 (8) | 0.0419 (9) | 0.0394 (9) | −0.0012 (7) | −0.0128 (7) | −0.0033 (7) |
| C10 | 0.0417 (9) | 0.0516 (11) | 0.0402 (10) | −0.0117 (8) | −0.0136 (8) | −0.0035 (8) |
| C11 | 0.0366 (8) | 0.0437 (10) | 0.0404 (9) | 0.0010 (7) | −0.0100 (7) | −0.0064 (8) |
| C12 | 0.0558 (10) | 0.0434 (11) | 0.0443 (10) | −0.0058 (8) | −0.0122 (8) | −0.0055 (8) |
| C13 | 0.0580 (11) | 0.0655 (13) | 0.0497 (12) | 0.0048 (9) | −0.0196 (9) | −0.0046 (10) |
| C14 | 0.0636 (11) | 0.0563 (12) | 0.0419 (10) | 0.0011 (9) | −0.0174 (9) | −0.0059 (9) |
| C15 | 0.0520 (10) | 0.0654 (13) | 0.0692 (14) | −0.0171 (9) | −0.0200 (10) | −0.0062 (11) |
| C16 | 0.0337 (8) | 0.0529 (11) | 0.0454 (10) | −0.0023 (8) | −0.0083 (8) | −0.0041 (9) |
| C17 | 0.0450 (10) | 0.0636 (13) | 0.0551 (12) | −0.0105 (9) | −0.0080 (9) | −0.0002 (10) |
| C18 | 0.0561 (11) | 0.0763 (15) | 0.0532 (12) | −0.0186 (10) | −0.0061 (9) | −0.0019 (11) |
| C19 | 0.140 (2) | 0.0633 (16) | 0.0644 (16) | −0.0376 (17) | −0.0452 (17) | 0.0139 (13) |
| C20 | 0.0515 (10) | 0.0560 (12) | 0.0443 (10) | −0.0104 (8) | −0.0088 (8) | −0.0082 (9) |
| C21 | 0.0628 (11) | 0.0599 (13) | 0.0483 (11) | 0.0059 (10) | −0.0092 (9) | −0.0034 (9) |
| C22 | 0.0746 (14) | 0.0808 (16) | 0.0480 (13) | 0.0019 (12) | 0.0005 (11) | −0.0138 (11) |
| C23 | 0.0634 (12) | 0.0680 (13) | 0.0554 (12) | −0.0141 (10) | −0.0206 (10) | −0.0166 (10) |
| C24 | 0.0565 (11) | 0.0577 (13) | 0.0543 (12) | −0.0039 (9) | −0.0161 (9) | 0.0028 (10) |
| C25 | 0.0997 (17) | 0.0578 (14) | 0.0771 (16) | −0.0012 (12) | −0.0425 (14) | 0.0001 (12) |
| C26 | 0.0800 (14) | 0.0880 (17) | 0.0359 (11) | −0.0195 (12) | −0.0106 (10) | 0.0004 (11) |
| C27 | 0.0821 (14) | 0.0792 (16) | 0.0513 (13) | −0.0035 (12) | −0.0298 (11) | 0.0076 (11) |
| C28 | 0.0988 (18) | 0.092 (2) | 0.0522 (14) | −0.0498 (16) | −0.0062 (12) | 0.0070 (13) |
| Cl1—C6 | 1.7436 (17) | C13—C27 | 1.379 (3) |
| N1—C2 | 1.314 (2) | C13—H13 | 0.9300 |
| N1—C8 | 1.381 (2) | C14—H14 | 0.9300 |
| N2—C2 | 1.367 (2) | C15—C17 | 1.373 (3) |
| N2—C9 | 1.385 (2) | C15—C23 | 1.374 (3) |
| N2—C16 | 1.459 (2) | C15—H15 | 0.9300 |
| C1—C7 | 1.378 (2) | C16—H16A | 1.000 (18) |
| C1—C11 | 1.388 (2) | C16—H16B | 0.960 (17) |
| C1—H1 | 0.9300 | C17—H17 | 0.9300 |
| C2—C11 | 1.471 (2) | C18—C28 | 1.379 (3) |
| C3—C17 | 1.380 (2) | C18—H18 | 0.9300 |
| C3—C4 | 1.391 (2) | C19—C28 | 1.356 (4) |
| C3—H3 | 0.9300 | C19—C25 | 1.362 (4) |
| C4—C20 | 1.392 (2) | C19—H19 | 0.9300 |
| C4—C8 | 1.470 (2) | C20—C23 | 1.372 (3) |
| C5—C21 | 1.378 (2) | C20—H20 | 0.9300 |
| C5—C13 | 1.383 (3) | C21—C22 | 1.381 (3) |
| C5—C9 | 1.480 (2) | C21—H21 | 0.9300 |
| C6—C7 | 1.369 (3) | C22—C26 | 1.364 (3) |
| C6—C14 | 1.373 (3) | C22—H22 | 0.9300 |
| C7—H7 | 0.9300 | C23—H23 | 0.9300 |
| C8—C9 | 1.368 (2) | C24—C25 | 1.380 (3) |
| C10—C24 | 1.377 (2) | C24—H24 | 0.9300 |
| C10—C18 | 1.378 (3) | C25—H25 | 0.9300 |
| C10—C16 | 1.501 (3) | C26—C27 | 1.362 (3) |
| C11—C12 | 1.390 (2) | C26—H26 | 0.9300 |
| C12—C14 | 1.381 (2) | C27—H27 | 0.9300 |
| C12—H12 | 0.9300 | C28—H28 | 0.9300 |
| C2—N1—C8 | 105.97 (13) | C17—C15—C23 | 119.26 (17) |
| C2—N2—C9 | 106.82 (13) | C17—C15—H15 | 120.4 |
| C2—N2—C16 | 128.26 (14) | C23—C15—H15 | 120.4 |
| C9—N2—C16 | 124.44 (14) | N2—C16—C10 | 114.03 (14) |
| C7—C1—C11 | 121.22 (18) | N2—C16—H16A | 107.8 (10) |
| C7—C1—H1 | 119.4 | C10—C16—H16A | 110.3 (10) |
| C11—C1—H1 | 119.4 | N2—C16—H16B | 108.6 (10) |
| N1—C2—N2 | 111.47 (14) | C10—C16—H16B | 109.0 (10) |
| N1—C2—C11 | 123.73 (15) | H16A—C16—H16B | 106.7 (13) |
| N2—C2—C11 | 124.79 (14) | C15—C17—C3 | 120.22 (17) |
| C17—C3—C4 | 121.31 (16) | C15—C17—H17 | 119.9 |
| C17—C3—H3 | 119.3 | C3—C17—H17 | 119.9 |
| C4—C3—H3 | 119.3 | C10—C18—C28 | 120.7 (2) |
| C3—C4—C20 | 117.33 (16) | C10—C18—H18 | 119.7 |
| C3—C4—C8 | 119.95 (15) | C28—C18—H18 | 119.7 |
| C20—C4—C8 | 122.61 (15) | C28—C19—C25 | 120.0 (2) |
| C21—C5—C13 | 118.12 (17) | C28—C19—H19 | 120.0 |
| C21—C5—C9 | 122.19 (16) | C25—C19—H19 | 120.0 |
| C13—C5—C9 | 119.68 (15) | C23—C20—C4 | 121.03 (17) |
| C7—C6—C14 | 121.57 (17) | C23—C20—H20 | 119.5 |
| C7—C6—Cl1 | 119.75 (15) | C4—C20—H20 | 119.5 |
| C14—C6—Cl1 | 118.69 (16) | C5—C21—C22 | 120.6 (2) |
| C6—C7—C1 | 118.92 (17) | C5—C21—H21 | 119.7 |
| C6—C7—H7 | 120.5 | C22—C21—H21 | 119.7 |
| C1—C7—H7 | 120.5 | C26—C22—C21 | 120.6 (2) |
| C9—C8—N1 | 109.98 (14) | C26—C22—H22 | 119.7 |
| C9—C8—C4 | 129.88 (15) | C21—C22—H22 | 119.7 |
| N1—C8—C4 | 120.14 (14) | C20—C23—C15 | 120.83 (18) |
| C8—C9—N2 | 105.76 (14) | C20—C23—H23 | 119.6 |
| C8—C9—C5 | 132.19 (15) | C15—C23—H23 | 119.6 |
| N2—C9—C5 | 121.91 (14) | C10—C24—C25 | 120.4 (2) |
| C24—C10—C18 | 118.34 (19) | C10—C24—H24 | 119.8 |
| C24—C10—C16 | 122.53 (16) | C25—C24—H24 | 119.8 |
| C18—C10—C16 | 119.12 (17) | C19—C25—C24 | 120.3 (2) |
| C1—C11—C12 | 118.42 (16) | C19—C25—H25 | 119.8 |
| C1—C11—C2 | 122.62 (16) | C24—C25—H25 | 119.8 |
| C12—C11—C2 | 118.87 (15) | C27—C26—C22 | 119.51 (19) |
| C14—C12—C11 | 120.65 (17) | C27—C26—H26 | 120.2 |
| C14—C12—H12 | 119.7 | C22—C26—H26 | 120.2 |
| C11—C12—H12 | 119.7 | C26—C27—C13 | 120.5 (2) |
| C27—C13—C5 | 120.73 (19) | C26—C27—H27 | 119.8 |
| C27—C13—H13 | 119.6 | C13—C27—H27 | 119.8 |
| C5—C13—H13 | 119.6 | C19—C28—C18 | 120.2 (2) |
| C6—C14—C12 | 119.22 (18) | C19—C28—H28 | 119.9 |
| C6—C14—H14 | 120.4 | C18—C28—H28 | 119.9 |
| C12—C14—H14 | 120.4 | ||
| C8—N1—C2—N2 | 0.58 (18) | N1—C2—C11—C12 | −39.5 (2) |
| C8—N1—C2—C11 | −178.04 (15) | N2—C2—C11—C12 | 142.03 (17) |
| C9—N2—C2—N1 | −0.62 (19) | C1—C11—C12—C14 | 0.9 (2) |
| C16—N2—C2—N1 | 171.59 (15) | C2—C11—C12—C14 | 177.51 (15) |
| C9—N2—C2—C11 | 177.97 (15) | C21—C5—C13—C27 | −1.1 (3) |
| C16—N2—C2—C11 | −9.8 (3) | C9—C5—C13—C27 | 177.59 (18) |
| C17—C3—C4—C20 | −1.0 (3) | C7—C6—C14—C12 | 0.0 (3) |
| C17—C3—C4—C8 | 175.34 (17) | Cl1—C6—C14—C12 | 179.73 (13) |
| C14—C6—C7—C1 | 0.3 (3) | C11—C12—C14—C6 | −0.6 (3) |
| Cl1—C6—C7—C1 | −179.45 (12) | C2—N2—C16—C10 | 115.85 (19) |
| C11—C1—C7—C6 | 0.1 (2) | C9—N2—C16—C10 | −73.2 (2) |
| C2—N1—C8—C9 | −0.31 (18) | C24—C10—C16—N2 | −28.4 (2) |
| C2—N1—C8—C4 | −179.85 (15) | C18—C10—C16—N2 | 152.54 (16) |
| C3—C4—C8—C9 | 165.88 (18) | C23—C15—C17—C3 | 0.8 (3) |
| C20—C4—C8—C9 | −17.9 (3) | C4—C3—C17—C15 | 0.3 (3) |
| C3—C4—C8—N1 | −14.7 (2) | C24—C10—C18—C28 | −0.3 (3) |
| C20—C4—C8—N1 | 161.51 (16) | C16—C10—C18—C28 | 178.75 (18) |
| N1—C8—C9—N2 | −0.06 (18) | C3—C4—C20—C23 | 0.7 (3) |
| C4—C8—C9—N2 | 179.42 (16) | C8—C4—C20—C23 | −175.60 (17) |
| N1—C8—C9—C5 | 175.61 (17) | C13—C5—C21—C22 | 0.9 (3) |
| C4—C8—C9—C5 | −4.9 (3) | C9—C5—C21—C22 | −177.70 (18) |
| C2—N2—C9—C8 | 0.40 (18) | C5—C21—C22—C26 | 0.1 (3) |
| C16—N2—C9—C8 | −172.20 (15) | C4—C20—C23—C15 | 0.4 (3) |
| C2—N2—C9—C5 | −175.82 (15) | C17—C15—C23—C20 | −1.2 (3) |
| C16—N2—C9—C5 | 11.6 (2) | C18—C10—C24—C25 | 0.1 (3) |
| C21—C5—C9—C8 | 105.1 (2) | C16—C10—C24—C25 | −178.92 (18) |
| C13—C5—C9—C8 | −73.6 (3) | C28—C19—C25—C24 | −0.1 (3) |
| C21—C5—C9—N2 | −79.8 (2) | C10—C24—C25—C19 | 0.1 (3) |
| C13—C5—C9—N2 | 101.5 (2) | C21—C22—C26—C27 | −1.1 (3) |
| C7—C1—C11—C12 | −0.7 (2) | C22—C26—C27—C13 | 0.9 (3) |
| C7—C1—C11—C2 | −177.10 (14) | C5—C13—C27—C26 | 0.2 (3) |
| N1—C2—C11—C1 | 136.88 (17) | C25—C19—C28—C18 | −0.1 (4) |
| N2—C2—C11—C1 | −41.5 (2) | C10—C18—C28—C19 | 0.3 (3) |
| H··· | ||||
| C3—H3···N1 | 0.93 | 2.56 | 2.874 (2) | 100 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C3—H3⋯N1 | 0.93 | 2.56 | 2.874 (2) | 100 |