Literature DB >> 21202849

2-(4-Amino-phen-yl)-1,3-benzoxazole.

Yuan Qu1, Shi-Lei Zhang, Lei Teng, Xian-You Xia, Yong Zhang.   

Abstract

In the title mol-ecule, C(13)H(10)N(2)O, the dihedral angle between the benzoxazole ring system and the benzene ring is 11.8 (1)°. In the crystal structure, mol-ecules are linked by inter-molecular N-H⋯N hydrogen bonds and π⋯π inter-actions [centroid-centroid distance = 3.6560 (15) Å] to form a two-dimensional network.

Entities:  

Year:  2008        PMID: 21202849      PMCID: PMC2961872          DOI: 10.1107/S160053680801653X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Prudhomme et al. (1986 ▶); Vinsova et al. (2005 ▶).

Experimental

Crystal data

C13H10N2O M = 210.23 Monoclinic, a = 4.1461 (3) Å b = 19.5420 (12) Å c = 12.7705 (8) Å β = 95.243 (1)° V = 1030.38 (12) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 298 (2) K 0.30 × 0.20 × 0.15 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.974, T max = 0.987 4628 measured reflections 1902 independent reflections 1315 reflections with I > 2σ(I) R int = 0.086

Refinement

R[F 2 > 2σ(F 2)] = 0.065 wR(F 2) = 0.151 S = 1.08 1902 reflections 151 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.17 e Å−3 Δρmin = −0.22 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT-Plus (Bruker, 2001 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680801653X/lh2630sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680801653X/lh2630Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H10N2OF000 = 440
Mr = 210.23Dx = 1.355 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 1089 reflections
a = 4.1461 (3) Åθ = 2.6–22.6º
b = 19.5420 (12) ŵ = 0.09 mm1
c = 12.7705 (8) ÅT = 298 (2) K
β = 95.243 (1)ºBlock, brown
V = 1030.38 (12) Å30.30 × 0.20 × 0.15 mm
Z = 4
Bruker SMART CCD diffractometer1902 independent reflections
Radiation source: fine-focus sealed tube1315 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.086
T = 298(2) Kθmax = 25.5º
φ and ω scansθmin = 1.9º
Absorption correction: multi-scan(SADABS; Sheldrick, 2003)h = −4→5
Tmin = 0.974, Tmax = 0.987k = −23→17
4628 measured reflectionsl = −14→15
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.065H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.151  w = 1/[σ2(Fo2) + (0.0636P)2 + 0.0374P] where P = (Fo2 + 2Fc2)/3
S = 1.09(Δ/σ)max < 0.001
1902 reflectionsΔρmax = 0.17 e Å3
151 parametersΔρmin = −0.22 e Å3
2 restraintsExtinction correction: none
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O11.1291 (4)0.93054 (9)0.09030 (12)0.0548 (5)
N11.0571 (5)0.89549 (10)0.25399 (15)0.0508 (6)
C80.8394 (6)0.82440 (13)0.10509 (18)0.0471 (6)
C71.0044 (6)0.88277 (13)0.15444 (18)0.0472 (6)
C130.6743 (6)0.77900 (13)0.16499 (19)0.0522 (7)
H130.66170.78820.23600.063*
C110.5492 (6)0.70536 (14)0.01598 (19)0.0511 (7)
C11.2748 (6)0.97814 (13)0.15893 (18)0.0488 (7)
N20.4179 (7)0.64627 (14)−0.02632 (19)0.0746 (8)
H2B0.430 (7)0.6376 (13)−0.0924 (9)0.090 (1)*
H2A0.300 (6)0.6220 (12)0.0115 (19)0.090 (1)*
C61.2309 (6)0.95673 (13)0.25916 (18)0.0487 (7)
C120.5301 (6)0.72124 (13)0.1221 (2)0.0561 (7)
H120.41830.69230.16380.067*
C90.8540 (6)0.80871 (14)−0.00072 (18)0.0529 (7)
H90.96220.8382−0.04280.064*
C21.4362 (7)1.03717 (14)0.1363 (2)0.0630 (8)
H21.46201.05040.06760.076*
C51.3567 (7)0.99539 (15)0.3444 (2)0.0615 (8)
H51.33150.98190.41300.074*
C100.7122 (6)0.75067 (14)−0.04423 (19)0.0556 (7)
H100.72540.7415−0.11520.067*
C31.5567 (7)1.07529 (15)0.2214 (2)0.0664 (8)
H31.66501.11590.21030.080*
C41.5205 (7)1.05458 (16)0.3237 (2)0.0640 (8)
H41.60881.08120.37950.077*
U11U22U33U12U13U23
O10.0637 (12)0.0592 (12)0.0423 (10)0.0044 (9)0.0097 (8)0.0024 (9)
N10.0542 (13)0.0567 (15)0.0422 (12)0.0052 (11)0.0075 (9)0.0029 (10)
C80.0499 (15)0.0475 (16)0.0443 (14)0.0116 (12)0.0062 (11)0.0034 (12)
C70.0491 (15)0.0520 (17)0.0419 (14)0.0135 (13)0.0115 (11)0.0073 (12)
C130.0545 (16)0.0579 (19)0.0453 (15)0.0110 (14)0.0119 (12)−0.0013 (13)
C110.0529 (16)0.0502 (17)0.0502 (15)0.0121 (13)0.0053 (12)−0.0028 (13)
C10.0528 (16)0.0470 (16)0.0469 (15)0.0099 (13)0.0059 (11)−0.0013 (12)
N20.097 (2)0.0717 (19)0.0584 (15)−0.0086 (15)0.0221 (14)−0.0112 (14)
C60.0493 (15)0.0537 (17)0.0439 (14)0.0127 (13)0.0082 (11)0.0023 (12)
C120.0601 (17)0.0587 (19)0.0518 (16)0.0057 (14)0.0173 (13)0.0044 (13)
C90.0594 (17)0.0594 (18)0.0410 (14)0.0089 (14)0.0103 (11)0.0072 (12)
C20.071 (2)0.063 (2)0.0568 (17)0.0044 (16)0.0167 (14)0.0039 (15)
C50.0651 (18)0.072 (2)0.0468 (16)0.0091 (16)0.0051 (13)−0.0044 (14)
C100.0680 (18)0.0591 (19)0.0408 (14)0.0067 (15)0.0111 (13)−0.0006 (13)
C30.067 (2)0.063 (2)0.070 (2)−0.0023 (15)0.0143 (15)−0.0052 (16)
C40.0577 (18)0.069 (2)0.0643 (19)0.0032 (16)0.0024 (14)−0.0143 (15)
O1—C71.374 (3)N2—H2B0.868 (10)
O1—C11.379 (3)N2—H2A0.859 (10)
N1—C71.294 (3)C6—C51.387 (3)
N1—C61.395 (3)C12—H120.9300
C8—C131.392 (3)C9—C101.372 (3)
C8—C91.392 (3)C9—H90.9300
C8—C71.445 (4)C2—C31.373 (4)
C13—C121.368 (3)C2—H20.9300
C13—H130.9300C5—C41.379 (4)
C11—N21.367 (4)C5—H50.9300
C11—C101.388 (3)C10—H100.9300
C11—C121.399 (3)C3—C41.389 (4)
C1—C61.374 (3)C3—H30.9300
C1—C21.378 (4)C4—H40.9300
C7—O1—C1104.26 (18)C5—C6—N1131.3 (2)
C7—N1—C6104.6 (2)C13—C12—C11120.6 (2)
C13—C8—C9117.4 (2)C13—C12—H12119.7
C13—C8—C7120.0 (2)C11—C12—H12119.7
C9—C8—C7122.4 (2)C10—C9—C8121.4 (2)
N1—C7—O1114.6 (2)C10—C9—H9119.3
N1—C7—C8127.7 (2)C8—C9—H9119.3
O1—C7—C8117.7 (2)C3—C2—C1115.9 (3)
C12—C13—C8121.7 (2)C3—C2—H2122.0
C12—C13—H13119.2C1—C2—H2122.0
C8—C13—H13119.2C4—C5—C6117.5 (2)
N2—C11—C10121.1 (2)C4—C5—H5121.2
N2—C11—C12121.0 (2)C6—C5—H5121.2
C10—C11—C12117.9 (2)C9—C10—C11121.0 (2)
C6—C1—C2123.9 (2)C9—C10—H10119.5
C6—C1—O1107.4 (2)C11—C10—H10119.5
C2—C1—O1128.7 (2)C2—C3—C4121.6 (3)
C11—N2—H2B119.6 (19)C2—C3—H3119.2
C11—N2—H2A118 (2)C4—C3—H3119.2
H2B—N2—H2A122 (3)C5—C4—C3121.5 (3)
C1—C6—C5119.5 (3)C5—C4—H4119.3
C1—C6—N1109.2 (2)C3—C4—H4119.3
C6—N1—C7—O10.1 (3)C7—N1—C6—C5−179.6 (3)
C6—N1—C7—C8178.5 (2)C8—C13—C12—C111.1 (4)
C1—O1—C7—N1−0.1 (3)N2—C11—C12—C13177.1 (3)
C1—O1—C7—C8−178.7 (2)C10—C11—C12—C13−1.4 (4)
C13—C8—C7—N19.5 (4)C13—C8—C9—C10−0.2 (4)
C9—C8—C7—N1−166.4 (2)C7—C8—C9—C10175.9 (2)
C13—C8—C7—O1−172.1 (2)C6—C1—C2—C30.1 (4)
C9—C8—C7—O112.0 (3)O1—C1—C2—C3179.7 (2)
C9—C8—C13—C12−0.3 (4)C1—C6—C5—C40.4 (4)
C7—C8—C13—C12−176.4 (2)N1—C6—C5—C4179.9 (2)
C7—O1—C1—C60.1 (2)C8—C9—C10—C11−0.1 (4)
C7—O1—C1—C2−179.6 (2)N2—C11—C10—C9−177.6 (3)
C2—C1—C6—C5−0.7 (4)C12—C11—C10—C90.9 (4)
O1—C1—C6—C5179.6 (2)C1—C2—C3—C40.9 (4)
C2—C1—C6—N1179.7 (2)C6—C5—C4—C30.5 (4)
O1—C1—C6—N10.0 (3)C2—C3—C4—C5−1.2 (4)
C7—N1—C6—C1−0.1 (3)
D—H···AD—HH···AD···AD—H···A
N2—H2B···N1i0.868 (10)2.174 (12)3.028 (3)168 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2B⋯N1i0.868 (10)2.174 (12)3.028 (3)168 (3)

Symmetry code: (i) .

  3 in total

1.  Semi-synthesis of A23187 (calcimycin) analogs. IV. Cation carrier properties in mitochondria of analogs with modified benzoxazole rings. Antimicrobial activity.

Authors:  M Prudhomme; J Guyot; G Jeminet
Journal:  J Antibiot (Tokyo)       Date:  1986-07       Impact factor: 2.649

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Highly lipophilic benzoxazoles with potential antibacterial activity.

Authors:  Jarmila Vinsová; Václav Horák; Vladimír Buchta; Jarmila Kaustová
Journal:  Molecules       Date:  2005-08-31       Impact factor: 4.411

  3 in total
  2 in total

1.  2-Methyl-1,3-benzoxazol-4-yl diphenyl-phosphinate.

Authors:  Dewald J Kleinhans
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-01-12

2.  3-Chloro-methyl-6,7-dimethyl-1,2-benz-oxazole.

Authors:  M Kayalvizhi; G Vasuki; A Veerareddy; G Laxminarasimha
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-09-26
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.