Literature DB >> 21202835

1-(3-Cyano-phen-yl)-3-(2-furo-yl)thio-urea.

Jahyr E Theodoro, Yvonne Mascarenhas, Javier Ellena, Osvaldo Estévez-Hernández, Julio Duque.   

Abstract

The title compound, C(13)H(9)N(3)O(2)S, was synthesized from furoyl isothio-cyanate and 3-amino-benzonitrile in dry acetone. The thio-urea group is in the thio-amide form. The thio-urea fragment makes dihedral angles of 3.91 (16) and 37.83 (12)° with the ketofuran group and the benzene ring, respectively. The mol-ecular geometry is stabilized by N-H⋯O hydrogen bonds. In the crystal structure, centrosymmetrically related mol-ecules are linked by two inter-molecular N-H⋯S hydrogen bonds to form dimers.

Entities:  

Year:  2008        PMID: 21202835      PMCID: PMC2961779          DOI: 10.1107/S1600536808016012

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Aly et al. (2007 ▶); Koch (2001 ▶). For related structures, see: Dago et al. (1987 ▶); Otazo-Sánchez et al. (2001 ▶); Pérez et al. (2008 ▶); Duque et al. (2008 ▶). For the synthesis, see: Otazo-Sánchez et al. (2001 ▶).

Experimental

Crystal data

C13H9N3O2S M = 271.29 Monoclinic, a = 16.7375 (5) Å b = 3.8789 (1) Å c = 19.6739 (5) Å β = 96.956 (1)° V = 1267.89 (6) Å3 Z = 4 Mo Kα radiation μ = 0.26 mm−1 T = 294 K 0.16 × 0.04 × 0.03 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: none 4807 measured reflections 2684 independent reflections 1908 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.070 wR(F 2) = 0.208 S = 1.08 2684 reflections 172 parameters H-atom parameters constrained Δρmax = 0.51 e Å−3 Δρmin = −0.34 e Å−3 Data collection: COLLECT (Enraf–Nonius, 2000 ▶); cell refinement: SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO (Otwinowski & Minor, 1997 ▶) and SCALEPACK; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808016012/rz2219sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808016012/rz2219Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H9N3O2SF000 = 560
Mr = 271.29Dx = 1.421 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 3051 reflections
a = 16.7375 (5) Åθ = 2.9–26.7º
b = 3.87890 (10) ŵ = 0.26 mm1
c = 19.6739 (5) ÅT = 294 K
β = 96.9560 (10)ºPrism, colourless
V = 1267.89 (6) Å30.16 × 0.04 × 0.03 mm
Z = 4
Enraf–Nonius KappaCCD diffractometerRint = 0.040
CCD rotation images, thick slices scansθmax = 26.9º
Absorption correction: noneθmin = 3.9º
4807 measured reflectionsh = −20→21
2684 independent reflectionsk = −4→4
1908 reflections with I > 2σ(I)l = −25→24
Refinement on F2H-atom parameters constrained
Least-squares matrix: full  w = 1/[σ2(Fo2) + (0.0641P)2 + 3.4802P] where P = (Fo2 + 2Fc2)/3
R[F2 > 2σ(F2)] = 0.071(Δ/σ)max < 0.001
wR(F2) = 0.208Δρmax = 0.51 e Å3
S = 1.08Δρmin = −0.34 e Å3
2684 reflectionsExtinction correction: none
172 parameters
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
S10.10993 (6)0.7197 (3)−0.00840 (5)0.0465 (3)
O10.08926 (19)0.9883 (11)0.21366 (15)0.0699 (11)
C130.3735 (3)1.3099 (15)−0.0369 (3)0.0617 (13)
N30.3872 (3)1.4227 (17)−0.0884 (3)0.0909 (17)
N10.0452 (2)0.7949 (10)0.10538 (16)0.0457 (9)
H10.00310.71860.08050.055*
O2−0.10121 (19)0.6665 (10)0.14431 (15)0.0643 (10)
N20.17909 (19)0.9396 (11)0.11374 (17)0.0482 (9)
H20.17120.9910.15490.058*
C70.2586 (2)0.9846 (11)0.0976 (2)0.0415 (9)
C5−0.1517 (3)0.7102 (15)0.2424 (3)0.0676 (15)
H5−0.18720.69860.27520.081*
C20.1143 (2)0.8261 (11)0.07249 (19)0.0398 (9)
C90.3556 (2)1.1694 (12)0.0263 (2)0.0474 (10)
C80.2756 (2)1.1209 (12)0.0366 (2)0.0456 (10)
H80.23421.17980.00260.055*
C3−0.0430 (2)0.7960 (12)0.1925 (2)0.0471 (10)
C100.4180 (3)1.0819 (14)0.0767 (2)0.0571 (12)
H100.47141.10930.0690.068*
C10.0355 (3)0.8694 (13)0.1719 (2)0.0495 (11)
C110.3993 (3)0.9541 (15)0.1381 (3)0.0633 (14)
H110.44030.90260.17290.076*
C4−0.0724 (3)0.8274 (14)0.2531 (2)0.0581 (13)
H4−0.04520.91050.29380.07*
C6−0.1676 (3)0.6183 (17)0.1772 (3)0.0705 (15)
H6−0.21680.53350.15690.085*
C120.3204 (3)0.9022 (13)0.1483 (2)0.0535 (11)
H120.30840.81090.18950.064*
U11U22U33U12U13U23
S10.0410 (6)0.0603 (8)0.0382 (5)−0.0046 (5)0.0050 (4)−0.0056 (5)
O10.0528 (19)0.112 (3)0.0457 (17)−0.021 (2)0.0093 (14)−0.0222 (19)
C130.049 (3)0.074 (4)0.063 (3)−0.004 (2)0.015 (2)0.004 (3)
N30.088 (4)0.115 (5)0.073 (3)−0.013 (3)0.025 (3)0.017 (3)
N10.0389 (17)0.061 (2)0.0367 (17)−0.0055 (17)0.0040 (14)−0.0029 (17)
O20.0536 (18)0.096 (3)0.0440 (16)−0.0177 (19)0.0072 (14)−0.0081 (18)
N20.0393 (18)0.069 (3)0.0355 (17)−0.0083 (18)0.0028 (13)−0.0001 (17)
C70.039 (2)0.041 (2)0.045 (2)−0.0045 (18)0.0045 (16)0.0001 (18)
C50.058 (3)0.075 (4)0.075 (3)0.001 (3)0.031 (3)−0.004 (3)
C20.0358 (19)0.043 (2)0.040 (2)−0.0019 (17)0.0049 (16)0.0019 (18)
C90.044 (2)0.046 (3)0.053 (2)−0.0032 (19)0.0071 (18)0.003 (2)
C80.039 (2)0.052 (3)0.044 (2)−0.0024 (19)0.0022 (17)0.0050 (19)
C30.042 (2)0.058 (3)0.042 (2)−0.004 (2)0.0073 (17)−0.003 (2)
C100.036 (2)0.071 (3)0.064 (3)−0.005 (2)0.005 (2)0.002 (3)
C10.047 (2)0.060 (3)0.042 (2)−0.005 (2)0.0072 (18)−0.001 (2)
C110.043 (2)0.081 (4)0.062 (3)−0.001 (2)−0.011 (2)0.010 (3)
C40.059 (3)0.073 (4)0.045 (2)−0.003 (3)0.016 (2)−0.009 (2)
C60.045 (3)0.094 (4)0.073 (3)−0.014 (3)0.013 (2)0.009 (3)
C120.051 (2)0.060 (3)0.047 (2)−0.008 (2)−0.0041 (19)0.006 (2)
S1—C21.637 (4)C5—C41.395 (7)
O1—C11.233 (5)C5—H50.93
C13—N31.153 (6)C9—C81.392 (6)
C13—C91.422 (6)C9—C101.392 (6)
N1—C11.368 (5)C8—H80.93
N1—C21.397 (5)C3—C41.348 (6)
N1—H10.86C3—C11.450 (6)
O2—C61.365 (6)C10—C111.377 (7)
O2—C31.369 (5)C10—H100.93
N2—C21.348 (5)C11—C121.375 (6)
N2—C71.416 (5)C11—H110.93
N2—H20.86C4—H40.93
C7—C81.373 (6)C6—H60.93
C7—C121.383 (6)C12—H120.93
C5—C61.326 (7)
N3—C13—C9179.3 (6)C9—C8—H8120.5
C1—N1—C2128.7 (3)C4—C3—O2109.9 (4)
C1—N1—H1115.6C4—C3—C1132.0 (4)
C2—N1—H1115.6O2—C3—C1118.1 (4)
C6—O2—C3105.9 (4)C11—C10—C9118.9 (4)
C2—N2—C7128.0 (3)C11—C10—H10120.6
C2—N2—H2116C9—C10—H10120.6
C7—N2—H2116O1—C1—N1123.7 (4)
C8—C7—C12120.2 (4)O1—C1—C3120.0 (4)
C8—C7—N2122.9 (4)N1—C1—C3116.3 (4)
C12—C7—N2116.8 (4)C12—C11—C10120.3 (4)
C6—C5—C4108.0 (4)C12—C11—H11119.9
C6—C5—H5126C10—C11—H11119.9
C4—C5—H5126C3—C4—C5106.3 (4)
N2—C2—N1113.6 (3)C3—C4—H4126.9
N2—C2—S1127.3 (3)C5—C4—H4126.9
N1—C2—S1119.1 (3)C5—C6—O2110.0 (4)
C8—C9—C10121.1 (4)C5—C6—H6125
C8—C9—C13119.1 (4)O2—C6—H6125
C10—C9—C13119.8 (4)C11—C12—C7120.6 (4)
C7—C8—C9118.9 (4)C11—C12—H12119.7
C7—C8—H8120.5C7—C12—H12119.7
C2—N2—C7—C841.1 (7)C2—N1—C1—C3−177.3 (4)
C2—N2—C7—C12−142.4 (5)C4—C3—C1—O1−1.2 (9)
C7—N2—C2—N1176.9 (4)O2—C3—C1—O1179.5 (5)
C7—N2—C2—S1−1.9 (7)C4—C3—C1—N1177.9 (5)
C1—N1—C2—N21.3 (7)O2—C3—C1—N1−1.3 (7)
C1—N1—C2—S1−179.8 (4)C9—C10—C11—C122.4 (8)
C12—C7—C8—C90.9 (7)O2—C3—C4—C50.5 (6)
N2—C7—C8—C9177.3 (4)C1—C3—C4—C5−178.8 (5)
C10—C9—C8—C70.1 (7)C6—C5—C4—C3−0.7 (7)
C13—C9—C8—C7179.9 (5)C4—C5—C6—O20.7 (7)
C6—O2—C3—C4−0.1 (6)C3—O2—C6—C5−0.4 (6)
C6—O2—C3—C1179.3 (5)C10—C11—C12—C7−1.5 (8)
C8—C9—C10—C11−1.7 (8)C8—C7—C12—C11−0.3 (7)
C13—C9—C10—C11178.4 (5)N2—C7—C12—C11−176.8 (5)
C2—N1—C1—O11.8 (8)
D—H···AD—HH···AD···AD—H···A
N1—H1···O20.862.282.701 (5)110
N1—H1···S1i0.862.803.629 (4)163
N2—H2···O10.861.902.622 (4)141
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O20.862.282.701 (5)110
N1—H1⋯S1i0.862.803.629 (4)163
N2—H2⋯O10.861.902.622 (4)141

Symmetry code: (i) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  3 in total

1.  1-Furoyl-3-[3-(trifluoro-meth-yl)phen-yl]thio-urea.

Authors:  Jahyr E Theodoro; O Estévez-Hernández; J Ellena; J Duque; Rodrigo S Corrêa
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-04-10

2.  N-(2-Furo-yl)-N'-(2-pyrid-yl)thio-urea.

Authors:  O Estévez-Hernández; J Duque; H Pérez; S Santos; Y Mascarenhas
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-31

3.  1-(2-Furo-yl)-3-(o-tol-yl)thio-urea.

Authors:  Rodrigo S Corrêa; O Estévez-Hernández; J Ellena; J Duque
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-05
  3 in total

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