Literature DB >> 21202688

(E)-3-(4-Chloro-phen-yl)-1-(2,4-dichloro-5-fluoro-phen-yl)prop-2-en-1-one.

Hoong-Kun Fun, Suchada Chantrapromma, P S Patil, M S Karthikeyan, S M Dharmaprakash.   

Abstract

In the title chalcone derivative, C(15)H(8)Cl(3)FO, the dihedral angle between the two benzene rings is 43.35 (8)°. Weak C-H⋯O and C-H⋯Cl intra-molecular inter-actions involving the enone group generate S(5) and S(6) ring motifs, respectively. In the crystal structure, mol-ecules are linked into anti-parallel chains along the a axis. These chains are stacked along the b axis and short Cl⋯F contacts of 3.100 (1) Å link adjacent mol-ecules of the anti-parallel chains into dimers.

Entities:  

Year:  2008        PMID: 21202688      PMCID: PMC2961420          DOI: 10.1107/S1600536808012178

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For hydrogen bond motifs, see: Bernstein et al. (1995 ▶). For bond-length data, see: Allen et al. (1987 ▶). For related structures, see, for example: Fun et al. (2007 ▶); Patil et al. (2007a ▶,b). For background to the applications of substituted chalcones, see, for example: Agrinskaya et al. (1999 ▶); Patil et al. (2006 ▶); Shivarama Holla et al. (2004 ▶). For related literature, see: Gu et al. (2008 ▶).

Experimental

Crystal data

C15H8Cl3FO M = 329.56 Monoclinic, a = 6.8271 (1) Å b = 3.7832 (1) Å c = 52.0206 (10) Å β = 96.100 (1)° V = 1336.00 (5) Å3 Z = 4 Mo Kα radiation μ = 0.69 mm−1 T = 100.0 (1) K 0.35 × 0.29 × 0.18 mm

Data collection

Bruker SMART APEX2 CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.794, T max = 0.889 42462 measured reflections 5852 independent reflections 5257 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.113 S = 1.28 5852 reflections 181 parameters H-atom parameters constrained Δρmax = 0.47 e Å−3 Δρmin = −0.31 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: APEX2; data reduction: SAINT (Bruker, 2005 ▶); program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808012178/sj2488sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808012178/sj2488Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H8Cl3FOF000 = 664
Mr = 329.56Dx = 1.638 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5852 reflections
a = 6.8271 (1) Åθ = 0.8–35.0º
b = 3.7832 (1) ŵ = 0.69 mm1
c = 52.0206 (10) ÅT = 100.0 (1) K
β = 96.100 (1)ºBlock, colorless
V = 1336.00 (5) Å30.35 × 0.29 × 0.18 mm
Z = 4
Bruker SMART APEX2 CCD area-detector diffractometer5852 independent reflections
Radiation source: fine-focus sealed tube5257 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.036
Detector resolution: 8.33 pixels mm-1θmax = 35.0º
T = 100.0(1) Kθmin = 0.8º
ω scansh = −11→11
Absorption correction: multi-scan(SADABS; Bruker, 2005)k = −6→6
Tmin = 0.794, Tmax = 0.889l = −83→72
42462 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.051H-atom parameters constrained
wR(F2) = 0.113  w = 1/[σ2(Fo2) + (0.0246P)2 + 1.777P] where P = (Fo2 + 2Fc2)/3
S = 1.29(Δ/σ)max = 0.001
5852 reflectionsΔρmax = 0.47 e Å3
181 parametersΔρmin = −0.31 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.75834 (7)0.29526 (14)0.494133 (8)0.02272 (10)
Cl20.27758 (6)−0.21297 (12)0.414214 (9)0.01926 (9)
Cl3−0.33602 (6)0.43796 (13)0.273464 (9)0.02136 (9)
F11.03386 (16)0.3790 (4)0.45548 (2)0.0240 (2)
O10.75361 (19)−0.1864 (4)0.37069 (3)0.0211 (3)
C10.8267 (2)0.1756 (5)0.41951 (3)0.0159 (3)
H10.92600.21700.40900.019*
C20.8591 (2)0.2477 (5)0.44562 (3)0.0164 (3)
C30.7139 (3)0.1882 (5)0.46193 (3)0.0163 (3)
C40.5343 (2)0.0489 (5)0.45181 (3)0.0169 (3)
H40.43630.00440.46250.020*
C50.5022 (2)−0.0237 (4)0.42545 (3)0.0147 (3)
C60.6458 (2)0.0408 (4)0.40887 (3)0.0144 (3)
C70.6216 (2)−0.0317 (5)0.38025 (3)0.0153 (3)
C80.4414 (2)0.0999 (5)0.36537 (3)0.0163 (3)
H80.35520.23900.37370.020*
C90.3966 (2)0.0265 (5)0.34022 (3)0.0160 (3)
H90.4878−0.10480.33220.019*
C100.2173 (2)0.1348 (4)0.32437 (3)0.0142 (3)
C110.1999 (2)0.0697 (5)0.29770 (3)0.0160 (3)
H110.3036−0.03700.29040.019*
C120.0306 (3)0.1616 (5)0.28197 (3)0.0163 (3)
H120.02050.11870.26430.020*
C13−0.1239 (2)0.3191 (5)0.29314 (3)0.0161 (3)
C14−0.1123 (2)0.3856 (5)0.31941 (3)0.0166 (3)
H14−0.21710.49030.32660.020*
C150.0583 (2)0.2938 (5)0.33493 (3)0.0167 (3)
H150.06720.33830.35260.020*
U11U22U33U12U13U23
Cl10.0267 (2)0.0276 (2)0.01395 (17)−0.00233 (17)0.00251 (14)−0.00137 (16)
Cl20.01366 (16)0.02036 (19)0.02387 (19)−0.00204 (14)0.00256 (13)−0.00089 (15)
Cl30.01787 (17)0.0229 (2)0.0221 (2)0.00123 (15)−0.00347 (14)0.00159 (16)
F10.0177 (5)0.0353 (7)0.0186 (5)−0.0072 (5)0.0003 (4)−0.0023 (5)
O10.0187 (6)0.0267 (7)0.0183 (6)0.0044 (5)0.0036 (4)−0.0029 (5)
C10.0135 (6)0.0179 (7)0.0163 (7)0.0005 (5)0.0023 (5)0.0005 (6)
C20.0139 (6)0.0184 (7)0.0167 (7)−0.0008 (5)0.0008 (5)0.0006 (6)
C30.0187 (7)0.0173 (7)0.0132 (6)0.0012 (6)0.0027 (5)0.0010 (6)
C40.0160 (7)0.0190 (7)0.0163 (7)0.0008 (6)0.0046 (5)0.0022 (6)
C50.0123 (6)0.0139 (7)0.0178 (7)0.0008 (5)0.0015 (5)0.0007 (5)
C60.0139 (6)0.0142 (7)0.0149 (7)0.0022 (5)0.0013 (5)0.0012 (5)
C70.0160 (6)0.0151 (7)0.0148 (7)0.0002 (5)0.0015 (5)−0.0004 (5)
C80.0160 (7)0.0159 (7)0.0167 (7)0.0022 (6)0.0006 (5)−0.0008 (6)
C90.0156 (6)0.0156 (7)0.0166 (7)−0.0001 (5)0.0014 (5)0.0001 (6)
C100.0152 (6)0.0126 (6)0.0148 (6)−0.0005 (5)0.0017 (5)−0.0001 (5)
C110.0177 (7)0.0158 (7)0.0148 (7)0.0004 (6)0.0036 (5)−0.0008 (6)
C120.0201 (7)0.0145 (7)0.0141 (7)0.0005 (6)0.0010 (5)0.0001 (5)
C130.0156 (6)0.0154 (7)0.0166 (7)−0.0013 (6)−0.0009 (5)0.0016 (6)
C140.0157 (6)0.0168 (7)0.0175 (7)0.0017 (6)0.0028 (5)−0.0003 (6)
C150.0169 (7)0.0190 (7)0.0143 (6)0.0007 (6)0.0023 (5)−0.0006 (6)
Cl1—C31.7190 (17)C8—C91.341 (2)
Cl2—C51.7366 (17)C8—H80.9300
Cl3—C131.7412 (17)C9—C101.460 (2)
F1—C21.343 (2)C9—H90.9300
O1—C71.224 (2)C10—C111.402 (2)
C1—C21.380 (2)C10—C151.403 (2)
C1—C61.395 (2)C11—C121.388 (2)
C1—H10.9300C11—H110.9300
C2—C31.390 (2)C12—C131.391 (2)
C3—C41.386 (2)C12—H120.9300
C4—C51.392 (2)C13—C141.383 (2)
C4—H40.9300C14—C151.389 (2)
C5—C61.394 (2)C14—H140.9300
C6—C71.505 (2)C15—H150.9300
C7—C81.469 (2)
C2—C1—C6120.37 (15)C7—C8—H8118.8
C2—C1—H1119.8C8—C9—C10125.68 (16)
C6—C1—H1119.8C8—C9—H9117.2
F1—C2—C1119.49 (15)C10—C9—H9117.2
F1—C2—C3119.28 (15)C11—C10—C15118.36 (15)
C1—C2—C3121.23 (16)C11—C10—C9119.16 (15)
C4—C3—C2119.29 (15)C15—C10—C9122.45 (15)
C4—C3—Cl1121.14 (13)C12—C11—C10121.15 (16)
C2—C3—Cl1119.55 (13)C12—C11—H11119.4
C3—C4—C5119.29 (15)C10—C11—H11119.4
C3—C4—H4120.4C11—C12—C13118.82 (15)
C5—C4—H4120.4C11—C12—H12120.6
C4—C5—C6121.82 (15)C13—C12—H12120.6
C4—C5—Cl2116.97 (13)C14—C13—C12121.60 (15)
C6—C5—Cl2121.17 (13)C14—C13—Cl3119.38 (13)
C5—C6—C1117.98 (15)C12—C13—Cl3119.02 (13)
C5—C6—C7124.71 (15)C13—C14—C15119.06 (16)
C1—C6—C7117.29 (15)C13—C14—H14120.5
O1—C7—C8124.03 (16)C15—C14—H14120.5
O1—C7—C6118.75 (15)C14—C15—C10121.01 (16)
C8—C7—C6117.19 (14)C14—C15—H15119.5
C9—C8—C7122.36 (16)C10—C15—H15119.5
C9—C8—H8118.8
C6—C1—C2—F1−179.66 (16)C5—C6—C7—C849.0 (2)
C6—C1—C2—C30.1 (3)C1—C6—C7—C8−132.33 (17)
F1—C2—C3—C4−179.28 (16)O1—C7—C8—C97.5 (3)
C1—C2—C3—C40.9 (3)C6—C7—C8—C9−174.50 (16)
F1—C2—C3—Cl11.8 (2)C7—C8—C9—C10177.37 (16)
C1—C2—C3—Cl1−177.94 (14)C8—C9—C10—C11173.51 (18)
C2—C3—C4—C5−0.9 (3)C8—C9—C10—C15−8.3 (3)
Cl1—C3—C4—C5177.97 (14)C15—C10—C11—C120.4 (3)
C3—C4—C5—C6−0.2 (3)C9—C10—C11—C12178.70 (16)
C3—C4—C5—Cl2177.69 (14)C10—C11—C12—C13−0.4 (3)
C4—C5—C6—C11.2 (3)C11—C12—C13—C140.0 (3)
Cl2—C5—C6—C1−176.57 (13)C11—C12—C13—Cl3179.54 (14)
C4—C5—C6—C7179.86 (16)C12—C13—C14—C150.2 (3)
Cl2—C5—C6—C72.1 (2)Cl3—C13—C14—C15−179.27 (14)
C2—C1—C6—C5−1.2 (3)C13—C14—C15—C10−0.2 (3)
C2—C1—C6—C7−179.91 (16)C11—C10—C15—C14−0.2 (3)
C5—C6—C7—O1−132.87 (19)C9—C10—C15—C14−178.37 (17)
C1—C6—C7—O145.8 (2)
D—H···AD—HH···AD···AD—H···A
C8—H8···Cl20.932.813.1164 (16)101
C9—H9···O10.932.572.878 (2)100
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C8—H8⋯Cl20.932.813.1164 (16)101
C9—H9⋯O10.932.572.878 (2)100
  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  3 in total

1.  (2R)-N-[5-(4-Chloro-phen-yl)-1,3,4-thia-diazol-2-yl]-2-(cinnamoylamino)propanamide.

Authors:  Shao-Hua Li; Hui-Ming Huang; Bin-Hai Kuang; Guo-Gang Tu; Cheng-Mei Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-24

2.  3-(4-Methoxy-phen-yl)-1-(2-pyrrol-yl)prop-2-en-1-one.

Authors:  Dong-Qing Li
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-13

3.  (2R)-2-Cinnamoylamino-N-[5-(4-methoxy-phen-yl)-1,3,4-thia-diazol-2-yl]propanamide.

Authors:  Shao-Hua Li; Gang Li; Hui-Ming Huang; Guo-Gang Tu; Cheng-Mei Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-06
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.