Literature DB >> 21202671

1-Vinyl-1H-indole-3-carbaldehyde.

S Selvanayagam, B Sridhar, K Ravikumar, S Kathiravan, R Raghunathan.   

Abstract

In the title compound, C(11)H(9)NO, the C and O atoms of the attached carbaldehyde group deviate by just 0.052 (2) and 0.076 (1) Å, respectively, from the mean plane of the indole ring system. In addition to van der Waals forces, the mol-ecular packing is stabilized by C-H⋯O hydrogen bonds, which form a C(7) chain motif, and π-π inter-actions (centroid-centroid distance 3.637 Å) between the pyrrole and benzene rings of the indole ring system.

Entities:  

Year:  2008        PMID: 21202671      PMCID: PMC2961622          DOI: 10.1107/S160053680801547X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Padwa et al. (1999 ▶); Mathiesen et al. (2005 ▶); Grinev et al. (1984 ▶); Gadaginamath & Patil (1999 ▶); Rodriguez et al. (1985 ▶); Karthick et al. (2005 ▶); Selvanayagam et al. (2005 ▶); Sonar et al. (2005 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C11H9NO M = 171.19 Monoclinic, a = 8.3200 (5) Å b = 8.1490 (5) Å c = 13.1620 (7) Å β = 99.952 (1)° V = 878.95 (9) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 293 (2) K 0.24 × 0.22 × 0.20 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer Absorption correction: none 9730 measured reflections 2072 independent reflections 1823 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.127 S = 1.05 2072 reflections 118 parameters H-atom parameters constrained Δρmax = 0.21 e Å−3 Δρmin = −0.19 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and PLATON (Spek, 2003 ▶); software used to prepare material for publication: SHELXL97 and PARST (Nardelli, 1995 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680801547X/bt2714sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680801547X/bt2714Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H9NOF000 = 360
Mr = 171.19Dx = 1.294 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 4554 reflections
a = 8.3200 (5) Åθ = 2.1–23.6º
b = 8.1490 (5) ŵ = 0.08 mm1
c = 13.1620 (7) ÅT = 293 (2) K
β = 99.952 (1)ºBlock, colourless
V = 878.95 (9) Å30.24 × 0.22 × 0.20 mm
Z = 4
Bruker SMART APEX CCD area-detector diffractometer1823 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.020
Monochromator: graphiteθmax = 28.0º
T = 293(2) Kθmin = 3.0º
ω scansh = −10→10
Absorption correction: nonek = −10→10
9730 measured reflectionsl = −17→16
2072 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.044H-atom parameters constrained
wR(F2) = 0.127  w = 1/[σ2(Fo2) + (0.0665P)2 + 0.1375P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
2072 reflectionsΔρmax = 0.21 e Å3
118 parametersΔρmin = −0.19 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.81283 (15)0.20464 (18)−0.13362 (9)0.0826 (4)
N10.41791 (12)0.24005 (13)0.07004 (7)0.0469 (3)
C10.54641 (14)0.14623 (13)0.12226 (8)0.0424 (3)
C20.56155 (16)0.06833 (16)0.21713 (9)0.0505 (3)
H20.48000.07480.25720.061*
C30.70276 (18)−0.01899 (17)0.24918 (10)0.0581 (3)
H30.7166−0.07360.31210.070*
C40.82544 (17)−0.02764 (17)0.18966 (11)0.0594 (4)
H40.9197−0.08700.21390.071*
C50.80997 (15)0.04980 (16)0.09564 (10)0.0527 (3)
H50.89250.04340.05630.063*
C60.66781 (14)0.13815 (13)0.06061 (8)0.0431 (3)
C70.60762 (15)0.23003 (15)−0.03148 (9)0.0480 (3)
C80.45684 (16)0.28725 (16)−0.02188 (9)0.0503 (3)
H80.39010.3497−0.07120.060*
C90.27187 (17)0.27412 (19)0.10596 (12)0.0615 (4)
H90.27010.25210.17510.074*
C100.14066 (19)0.3327 (2)0.05257 (15)0.0779 (5)
H10A0.13650.3567−0.01690.094*
H10B0.04980.35110.08340.094*
C110.68162 (19)0.2565 (2)−0.12120 (11)0.0621 (4)
H110.62330.3191−0.17420.075*
U11U22U33U12U13U23
O10.0720 (7)0.1185 (10)0.0649 (7)0.0021 (6)0.0336 (6)0.0075 (6)
N10.0474 (5)0.0518 (6)0.0428 (5)0.0032 (4)0.0110 (4)−0.0026 (4)
C10.0457 (6)0.0418 (5)0.0396 (5)−0.0022 (4)0.0075 (4)−0.0069 (4)
C20.0595 (7)0.0521 (7)0.0417 (6)−0.0035 (5)0.0136 (5)−0.0023 (5)
C30.0707 (8)0.0549 (7)0.0464 (6)0.0007 (6)0.0035 (6)0.0051 (5)
C40.0562 (7)0.0544 (7)0.0641 (8)0.0080 (6)0.0011 (6)0.0007 (6)
C50.0475 (6)0.0527 (7)0.0591 (7)0.0000 (5)0.0129 (5)−0.0070 (5)
C60.0472 (6)0.0418 (6)0.0411 (5)−0.0053 (4)0.0102 (4)−0.0072 (4)
C70.0543 (7)0.0486 (6)0.0425 (6)−0.0046 (5)0.0124 (5)−0.0023 (5)
C80.0566 (7)0.0513 (7)0.0427 (6)0.0017 (5)0.0079 (5)0.0021 (5)
C90.0564 (8)0.0736 (9)0.0586 (8)0.0089 (6)0.0209 (6)−0.0013 (6)
C100.0580 (9)0.0892 (12)0.0894 (12)0.0170 (8)0.0205 (8)0.0036 (9)
C110.0670 (8)0.0743 (9)0.0481 (7)−0.0059 (7)0.0185 (6)0.0041 (6)
O1—C111.2079 (19)C5—C61.3933 (17)
N1—C81.3610 (16)C5—H50.9300
N1—C11.3949 (15)C6—C71.4390 (17)
N1—C91.4055 (16)C7—C81.3645 (18)
C1—C21.3869 (16)C7—C111.4393 (18)
C1—C61.4023 (16)C8—H80.9300
C2—C31.3760 (19)C9—C101.284 (2)
C2—H20.9300C9—H90.9300
C3—C41.392 (2)C10—H10A0.9300
C3—H30.9300C10—H10B0.9300
C4—C51.3751 (19)C11—H110.9300
C4—H40.9300
C8—N1—C1108.24 (10)C5—C6—C1119.20 (11)
C8—N1—C9126.55 (12)C5—C6—C7134.39 (11)
C1—N1—C9125.17 (11)C1—C6—C7106.40 (10)
C2—C1—N1129.57 (11)C8—C7—C6106.95 (10)
C2—C1—C6122.48 (11)C8—C7—C11123.72 (13)
N1—C1—C6107.94 (10)C6—C7—C11129.29 (12)
C3—C2—C1116.91 (12)N1—C8—C7110.46 (11)
C3—C2—H2121.5N1—C8—H8124.8
C1—C2—H2121.5C7—C8—H8124.8
C2—C3—C4121.60 (12)C10—C9—N1126.30 (15)
C2—C3—H3119.2C10—C9—H9116.8
C4—C3—H3119.2N1—C9—H9116.8
C5—C4—C3121.31 (12)C9—C10—H10A120.0
C5—C4—H4119.3C9—C10—H10B120.0
C3—C4—H4119.3H10A—C10—H10B120.0
C4—C5—C6118.49 (12)O1—C11—C7125.68 (15)
C4—C5—H5120.8O1—C11—H11117.2
C6—C5—H5120.8C7—C11—H11117.2
C8—N1—C1—C2−178.34 (12)N1—C1—C6—C7−0.32 (12)
C9—N1—C1—C2−0.3 (2)C5—C6—C7—C8178.96 (13)
C8—N1—C1—C60.77 (13)C1—C6—C7—C8−0.24 (13)
C9—N1—C1—C6178.86 (12)C5—C6—C7—C111.3 (2)
N1—C1—C2—C3178.96 (11)C1—C6—C7—C11−177.94 (13)
C6—C1—C2—C3−0.04 (18)C1—N1—C8—C7−0.95 (14)
C1—C2—C3—C40.56 (19)C9—N1—C8—C7−179.00 (12)
C2—C3—C4—C5−0.6 (2)C6—C7—C8—N10.73 (14)
C3—C4—C5—C60.0 (2)C11—C7—C8—N1178.60 (12)
C4—C5—C6—C10.47 (17)C8—N1—C9—C1011.7 (3)
C4—C5—C6—C7−178.65 (12)C1—N1—C9—C10−166.00 (16)
C2—C1—C6—C5−0.47 (17)C8—C7—C11—O1−178.09 (15)
N1—C1—C6—C5−179.66 (10)C6—C7—C11—O1−0.7 (3)
C2—C1—C6—C7178.87 (10)
D—H···AD—HH···AD···AD—H···A
C9—H9···O1i0.932.513.390 (2)159
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C9—H9⋯O1i0.932.513.390 (2)159

Symmetry code: (i) .

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