| Literature DB >> 21202667 |
Abstract
The title mol-ecule, C(13)H(11)NO(4)S, displays a trans configuration with respect to the imine C=N double bond. The centralEntities:
Year: 2008 PMID: 21202667 PMCID: PMC2961500 DOI: 10.1107/S1600536808015407
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H11NO4S | |
| Monoclinic, | Mo |
| Hall symbol: C -2yc | Cell parameters from 1329 reflections |
| θ = 2.7–23.9º | |
| µ = 0.27 mm−1 | |
| β = 97.223 (2)º | Block, yellow |
| 0.42 × 0.31 × 0.15 mm | |
| Siemens SMART CCD area-detector diffractometer | 1952 independent reflections |
| Radiation source: fine-focus sealed tube | 1656 reflections with |
| Monochromator: graphite | |
| θmax = 25.0º | |
| φ and ω scans | θmin = 1.4º |
| Absorption correction: multi-scan(SADABS; Sheldrick, 1996) | |
| 3185 measured reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| | |
| (Δ/σ)max = 0.001 | |
| Δρmax = 0.34 e Å−3 | |
| 1952 reflections | Δρmin = −0.30 e Å−3 |
| 213 parameters | Extinction correction: none |
| 2 restraints | Absolute structure: Flack (1983), 822 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: −0.06 (14) |
| Secondary atom site location: difference Fourier map |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| S1 | 0.75870 (18) | 0.76105 (3) | 0.47671 (13) | 0.0372 (3) | |
| N1 | 0.6129 (9) | 0.96320 (13) | 0.4070 (4) | 0.0490 (10) | |
| O1 | 0.6035 (6) | 0.73963 (10) | 0.3515 (3) | 0.0470 (8) | |
| O2 | 0.6306 (8) | 0.74475 (13) | 0.6247 (5) | 0.0663 (11) | |
| H2 | 0.4678 | 0.7526 | 0.6185 | 0.099* | |
| O3 | 1.0490 (7) | 0.75204 (11) | 0.5021 (4) | 0.0501 (8) | |
| O4 | 0.387 (2) | 1.0337 (3) | 0.2463 (11) | 0.0675 (18) | 0.528 (8) |
| H4 | 0.4579 | 1.0080 | 0.2483 | 0.101* | 0.528 (8) |
| O4' | 0.285 (2) | 1.0279 (4) | 0.3133 (12) | 0.0675 (18) | 0.472 (8) |
| H4' | 0.3138 | 1.0031 | 0.3557 | 0.101* | 0.472 (8) |
| C1 | 0.7196 (9) | 0.82135 (14) | 0.4573 (5) | 0.0365 (11) | |
| C2 | 0.585 (3) | 0.8377 (3) | 0.3264 (16) | 0.042 (3) | 0.510 (16) |
| H2A | 0.5178 | 0.8179 | 0.2493 | 0.051* | 0.510 (16) |
| C3 | 0.554 (3) | 0.8837 (3) | 0.3133 (16) | 0.045 (3) | 0.510 (16) |
| H3 | 0.4598 | 0.8955 | 0.2254 | 0.055* | 0.510 (16) |
| C2' | 0.470 (3) | 0.8413 (3) | 0.3925 (16) | 0.042 (3) | 0.490 (16) |
| H2' | 0.3224 | 0.8223 | 0.3586 | 0.051* | 0.490 (16) |
| C3' | 0.439 (3) | 0.8887 (3) | 0.3777 (16) | 0.044 (3) | 0.490 (16) |
| H3' | 0.2733 | 0.9015 | 0.3339 | 0.053* | 0.490 (16) |
| C4 | 0.6589 (11) | 0.91570 (17) | 0.4298 (6) | 0.0426 (11) | |
| C5 | 0.805 (3) | 0.8949 (4) | 0.5579 (16) | 0.046 (3) | 0.510 (16) |
| H5 | 0.8868 | 0.9136 | 0.6346 | 0.056* | 0.510 (16) |
| C6 | 0.829 (3) | 0.8473 (4) | 0.5726 (16) | 0.043 (3) | 0.510 (16) |
| H6 | 0.9179 | 0.8339 | 0.6592 | 0.052* | 0.510 (16) |
| C5' | 0.909 (3) | 0.8993 (4) | 0.4909 (19) | 0.047 (3) | 0.490 (16) |
| H5' | 1.0547 | 0.9193 | 0.5213 | 0.056* | 0.490 (16) |
| C6' | 0.941 (3) | 0.8522 (4) | 0.5065 (17) | 0.047 (3) | 0.490 (16) |
| H6' | 1.1100 | 0.8403 | 0.5497 | 0.057* | 0.490 (16) |
| C7 | 0.7682 (15) | 0.99282 (16) | 0.4771 (9) | 0.0655 (13) | |
| H7 | 0.9180 | 0.9826 | 0.5429 | 0.079* | |
| C8 | 0.7245 (14) | 1.04208 (16) | 0.4601 (8) | 0.0570 (14) | |
| C9 | 0.5144 (14) | 1.0594 (2) | 0.3606 (8) | 0.0771 (19) | |
| C10 | 0.488 (2) | 1.1068 (2) | 0.3501 (10) | 0.107 (3) | |
| H10 | 0.3437 | 1.1187 | 0.2843 | 0.129* | |
| C11 | 0.6584 (18) | 1.1363 (2) | 0.4287 (9) | 0.0768 (18) | |
| H11 | 0.6321 | 1.1679 | 0.4172 | 0.092* | |
| C12 | 0.863 (2) | 1.1202 (2) | 0.5224 (11) | 0.102 (3) | |
| H12 | 0.9840 | 1.1404 | 0.5776 | 0.122* | |
| C13 | 0.8992 (19) | 1.0729 (2) | 0.5393 (10) | 0.111 (3) | |
| H13 | 1.0455 | 1.0618 | 0.6059 | 0.133* |
| S1 | 0.0310 (6) | 0.0410 (5) | 0.0369 (5) | 0.0050 (6) | −0.0055 (4) | −0.0024 (6) |
| N1 | 0.052 (3) | 0.041 (2) | 0.054 (3) | −0.0006 (18) | 0.008 (2) | 0.0014 (18) |
| O1 | 0.048 (2) | 0.0473 (18) | 0.0402 (19) | 0.0021 (15) | −0.0139 (15) | −0.0081 (15) |
| O2 | 0.055 (2) | 0.072 (2) | 0.070 (3) | 0.0037 (18) | 0.0028 (19) | 0.0086 (19) |
| O3 | 0.0328 (18) | 0.057 (2) | 0.060 (2) | 0.0086 (14) | 0.0027 (15) | −0.0050 (16) |
| O4 | 0.076 (6) | 0.062 (3) | 0.062 (5) | 0.009 (3) | −0.001 (3) | 0.008 (4) |
| O4' | 0.076 (6) | 0.062 (3) | 0.062 (5) | 0.009 (3) | −0.001 (3) | 0.008 (4) |
| C1 | 0.032 (3) | 0.040 (2) | 0.037 (3) | 0.002 (2) | 0.003 (2) | 0.000 (2) |
| C2 | 0.047 (8) | 0.039 (6) | 0.039 (7) | −0.008 (5) | −0.001 (6) | −0.005 (5) |
| C3 | 0.047 (7) | 0.045 (6) | 0.043 (7) | 0.002 (5) | 0.001 (6) | 0.002 (5) |
| C2' | 0.036 (7) | 0.041 (6) | 0.047 (8) | −0.004 (5) | −0.004 (6) | −0.004 (5) |
| C3' | 0.044 (7) | 0.042 (6) | 0.046 (7) | 0.005 (5) | 0.004 (6) | 0.000 (5) |
| C4 | 0.041 (3) | 0.040 (3) | 0.046 (3) | −0.002 (2) | 0.005 (2) | −0.001 (2) |
| C5 | 0.057 (9) | 0.041 (6) | 0.042 (7) | 0.002 (5) | 0.007 (6) | −0.008 (5) |
| C6 | 0.048 (8) | 0.042 (6) | 0.036 (7) | 0.002 (5) | −0.003 (6) | −0.007 (5) |
| C5' | 0.041 (8) | 0.042 (6) | 0.056 (9) | −0.003 (5) | 0.004 (7) | −0.008 (6) |
| C6' | 0.037 (8) | 0.046 (7) | 0.057 (9) | 0.003 (5) | 0.000 (7) | −0.003 (6) |
| C7 | 0.069 (3) | 0.048 (3) | 0.075 (3) | −0.001 (4) | −0.010 (3) | 0.009 (4) |
| C8 | 0.064 (4) | 0.042 (2) | 0.066 (4) | −0.006 (3) | 0.013 (3) | 0.002 (3) |
| C9 | 0.083 (5) | 0.051 (3) | 0.091 (5) | 0.019 (3) | −0.014 (4) | −0.018 (3) |
| C10 | 0.125 (7) | 0.058 (4) | 0.126 (7) | 0.030 (4) | −0.035 (6) | −0.003 (4) |
| C11 | 0.105 (6) | 0.046 (3) | 0.084 (5) | 0.006 (4) | 0.027 (4) | −0.004 (3) |
| C12 | 0.118 (7) | 0.056 (4) | 0.125 (7) | −0.021 (5) | −0.012 (6) | 0.001 (5) |
| C13 | 0.120 (6) | 0.058 (4) | 0.139 (7) | −0.013 (4) | −0.042 (6) | 0.010 (5) |
| S1—O1 | 1.422 (3) | C3'—H3' | 0.93 |
| S1—O3 | 1.428 (3) | C4—C5' | 1.359 (15) |
| S1—O2 | 1.615 (4) | C4—C5 | 1.415 (14) |
| S1—C1 | 1.767 (4) | C5—C6 | 1.392 (15) |
| N1—C7 | 1.262 (7) | C5—H5 | 0.93 |
| N1—C4 | 1.408 (6) | C6—H6 | 0.93 |
| O2—H2 | 0.82 | C5'—C6' | 1.382 (15) |
| O4—C9 | 1.359 (10) | C5'—H5' | 0.93 |
| O4—H4 | 0.82 | C6'—H6' | 0.93 |
| O4'—C9 | 1.465 (12) | C7—C8 | 1.451 (6) |
| O4'—H4' | 0.82 | C7—H7 | 0.93 |
| C1—C6 | 1.340 (11) | C8—C9 | 1.370 (8) |
| C1—C2 | 1.363 (12) | C8—C13 | 1.372 (9) |
| C1—C2' | 1.405 (12) | C9—C10 | 1.382 (8) |
| C1—C6' | 1.430 (13) | C10—C11 | 1.333 (11) |
| C2—C3 | 1.348 (13) | C10—H10 | 0.93 |
| C2—H2A | 0.93 | C11—C12 | 1.310 (10) |
| C3—C4 | 1.448 (13) | C11—H11 | 0.93 |
| C3—H3 | 0.93 | C12—C13 | 1.390 (9) |
| C2'—C3' | 1.387 (14) | C12—H12 | 0.93 |
| C2'—H2' | 0.93 | C13—H13 | 0.93 |
| C3'—C4 | 1.364 (12) | ||
| O1—S1—O3 | 117.6 (2) | C5—C4—C3 | 114.6 (7) |
| O1—S1—O2 | 108.0 (2) | C6—C5—C4 | 122.0 (10) |
| O3—S1—O2 | 106.9 (2) | C6—C5—H5 | 119.0 |
| O1—S1—C1 | 108.29 (19) | C4—C5—H5 | 119.0 |
| O3—S1—C1 | 106.8 (2) | C1—C6—C5 | 117.5 (10) |
| O2—S1—C1 | 108.9 (2) | C1—C6—H6 | 121.2 |
| C7—N1—C4 | 121.3 (4) | C5—C6—H6 | 121.2 |
| S1—O2—H2 | 109.5 | C4—C5'—C6' | 118.2 (11) |
| C9—O4—H4 | 109.5 | C4—C5'—H5' | 120.9 |
| C9—O4'—H4' | 109.5 | C6'—C5'—H5' | 120.9 |
| C6—C1—C2 | 125.4 (8) | C5'—C6'—C1 | 121.1 (11) |
| C6—C1—C2' | 109.3 (8) | C5'—C6'—H6' | 119.5 |
| C2—C1—C6' | 108.3 (7) | C1—C6'—H6' | 119.5 |
| C2'—C1—C6' | 116.8 (7) | N1—C7—C8 | 123.2 (6) |
| C6—C1—S1 | 116.8 (6) | N1—C7—H7 | 118.4 |
| C2—C1—S1 | 117.7 (5) | C8—C7—H7 | 118.4 |
| C2'—C1—S1 | 121.8 (5) | C9—C8—C13 | 117.8 (6) |
| C6'—C1—S1 | 121.4 (5) | C9—C8—C7 | 121.3 (6) |
| C3—C2—C1 | 117.3 (10) | C13—C8—C7 | 120.9 (6) |
| C3—C2—H2A | 121.4 | O4—C9—C8 | 121.9 (6) |
| C1—C2—H2A | 121.4 | O4—C9—C10 | 117.7 (7) |
| C2—C3—C4 | 123.0 (10) | C8—C9—C10 | 117.7 (6) |
| C2—C3—H3 | 118.5 | C8—C9—O4' | 116.2 (6) |
| C4—C3—H3 | 118.5 | C10—C9—O4' | 122.7 (7) |
| C3'—C2'—C1 | 121.9 (9) | C11—C10—C9 | 123.8 (7) |
| C3'—C2'—H2' | 119.0 | C11—C10—H10 | 118.1 |
| C1—C2'—H2' | 119.0 | C9—C10—H10 | 118.1 |
| C4—C3'—C2' | 117.6 (10) | C12—C11—C10 | 119.1 (7) |
| C4—C3'—H3' | 121.2 | C12—C11—H11 | 120.5 |
| C2'—C3'—H3' | 121.2 | C10—C11—H11 | 120.5 |
| C5'—C4—C3' | 124.4 (8) | C11—C12—C13 | 119.9 (8) |
| C5'—C4—N1 | 121.3 (6) | C11—C12—H12 | 120.0 |
| C3'—C4—N1 | 114.1 (6) | C13—C12—H12 | 120.0 |
| C3'—C4—C5 | 109.2 (8) | C8—C13—C12 | 121.7 (8) |
| N1—C4—C5 | 126.3 (6) | C8—C13—H13 | 119.2 |
| C5'—C4—C3 | 106.8 (8) | C12—C13—H13 | 119.2 |
| N1—C4—C3 | 119.1 (6) | ||
| O1—S1—C1—C6 | 173.5 (9) | C3'—C4—C5—C6 | 34.7 (15) |
| O3—S1—C1—C6 | −58.9 (9) | N1—C4—C5—C6 | 177.2 (9) |
| O2—S1—C1—C6 | 56.3 (9) | C3—C4—C5—C6 | −3.6 (16) |
| O1—S1—C1—C2 | −7.4 (9) | C2—C1—C6—C5 | −0.2 (17) |
| O3—S1—C1—C2 | 120.2 (8) | C2'—C1—C6—C5 | −37.8 (14) |
| O2—S1—C1—C2 | −124.6 (8) | C6'—C1—C6—C5 | 71.4 (15) |
| O1—S1—C1—C2' | 35.0 (9) | S1—C1—C6—C5 | 178.8 (9) |
| O3—S1—C1—C2' | 162.6 (8) | C4—C5—C6—C1 | 3.0 (18) |
| O2—S1—C1—C2' | −82.2 (9) | C3'—C4—C5'—C6' | −2.4 (19) |
| O1—S1—C1—C6' | −144.8 (9) | N1—C4—C5'—C6' | −178.4 (10) |
| O3—S1—C1—C6' | −17.2 (9) | C5—C4—C5'—C6' | 71.8 (15) |
| O2—S1—C1—C6' | 98.0 (9) | C3—C4—C5'—C6' | −37.3 (15) |
| C6—C1—C2—C3 | −1.7 (17) | C4—C5'—C6'—C1 | 1(2) |
| C2'—C1—C2—C3 | 72.3 (14) | C6—C1—C6'—C5' | −86.4 (17) |
| C6'—C1—C2—C3 | −38.2 (14) | C2—C1—C6'—C5' | 39.1 (16) |
| S1—C1—C2—C3 | 179.3 (9) | C2'—C1—C6'—C5' | 0.2 (17) |
| C1—C2—C3—C4 | 1.0 (18) | S1—C1—C6'—C5' | 180.0 (10) |
| C6—C1—C2'—C3' | 38.5 (15) | C4—N1—C7—C8 | −178.4 (6) |
| C2—C1—C2'—C3' | −85.4 (15) | N1—C7—C8—C9 | −2.7 (11) |
| C6'—C1—C2'—C3' | −0.5 (16) | N1—C7—C8—C13 | 179.9 (8) |
| S1—C1—C2'—C3' | 179.7 (9) | C13—C8—C9—O4 | 159.1 (9) |
| C1—C2'—C3'—C4 | −0.6 (17) | C7—C8—C9—O4 | −18.5 (11) |
| C2'—C3'—C4—C5' | 2.1 (17) | C13—C8—C9—C10 | −1.8 (11) |
| C2'—C3'—C4—N1 | 178.4 (9) | C7—C8—C9—C10 | −179.4 (8) |
| C2'—C3'—C4—C5 | −34.2 (14) | C13—C8—C9—O4' | −161.6 (8) |
| C2'—C3'—C4—C3 | 71.5 (13) | C7—C8—C9—O4' | 20.9 (11) |
| C7—N1—C4—C5' | −19.9 (12) | O4—C9—C10—C11 | −160.3 (10) |
| C7—N1—C4—C3' | 163.7 (9) | C8—C9—C10—C11 | 1.4 (14) |
| C7—N1—C4—C5 | 22.8 (12) | O4'—C9—C10—C11 | 159.7 (10) |
| C7—N1—C4—C3 | −156.4 (9) | C9—C10—C11—C12 | −0.2 (15) |
| C2—C3—C4—C5' | 38.7 (16) | C10—C11—C12—C13 | −0.4 (14) |
| C2—C3—C4—C3' | −87.5 (16) | C9—C8—C13—C12 | 1.3 (13) |
| C2—C3—C4—N1 | −179.1 (10) | C7—C8—C13—C12 | 178.9 (9) |
| C2—C3—C4—C5 | 1.5 (17) | C11—C12—C13—C8 | −0.2 (14) |
| C5'—C4—C5—C6 | −88.1 (15) |
| H··· | ||||
| O2—H2···O3i | 0.82 | 2.17 | 2.917 (5) | 151 |
| O4—H4···N1 | 0.82 | 2.01 | 2.665 (10) | 136 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2—H2⋯O3i | 0.82 | 2.17 | 2.917 (5) | 151 |
| O4—H4⋯N1 | 0.82 | 2.01 | 2.665 (10) | 136 |
Symmetry code: (i) .