Literature DB >> 21202636

Ethyl 5-formyl-2,4-dimethyl-1H-pyrrole-3-carboxyl-ate.

Si-Shun Kang1, Hai-Lin Li, Hai-Su Zeng, Hai-Bo Wang.   

Abstract

The molecule of the title compound, C(10)H(13)NO(3), is approximately planar. A network of N-H⋯O and weak C-H⋯O hydrogen bonds helps to consolidate the crystal structure.

Entities:  

Year:  2008        PMID: 21202636      PMCID: PMC2961598          DOI: 10.1107/S1600536808014542

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Sun et al. (2002 ▶). For details of the synthesis, see: Tang et al. (1999 ▶).

Experimental

Crystal data

C10H13NO3 M = 195.21 Monoclinic, a = 3.9830 (8) Å b = 15.572 (3) Å c = 16.213 (3) Å β = 96.96 (3)° V = 998.2 (3) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 293 (2) K 0.20 × 0.05 × 0.05 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.981, T max = 0.995 2069 measured reflections 1798 independent reflections 935 reflections with I > 2σ(I) R int = 0.021 3 standard reflections every 200 reflections intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.083 wR(F 2) = 0.190 S = 1.03 1798 reflections 127 parameters H-atom parameters constrained Δρmax = 0.16 e Å−3 Δρmin = −0.17 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808014542/hb2732sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808014542/hb2732Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H13NO3F000 = 416
Mr = 195.21Dx = 1.299 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 25 reflections
a = 3.9830 (8) Åθ = 9–12º
b = 15.572 (3) ŵ = 0.10 mm1
c = 16.213 (3) ÅT = 293 (2) K
β = 96.96 (3)ºNeedle, colourless
V = 998.2 (3) Å30.20 × 0.05 × 0.05 mm
Z = 4
Enraf–Nonius CAD-4 diffractometerRint = 0.021
Radiation source: fine-focus sealed tubeθmax = 25.2º
Monochromator: graphiteθmin = 1.8º
T = 293(2) Kh = −4→4
ω/2θ scansk = 0→18
Absorption correction: ψ scan(North et al., 1968)l = 0→19
Tmin = 0.981, Tmax = 0.9953 standard reflections
2069 measured reflections every 200 reflections
1798 independent reflections intensity decay: none
935 reflections with I > 2σ(I)
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.083H-atom parameters constrained
wR(F2) = 0.190  w = 1/[σ2(Fo2) + (0.06P)2 + 0.5P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
1798 reflectionsΔρmax = 0.16 e Å3
127 parametersΔρmin = −0.17 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N0.3042 (9)−0.0589 (2)0.60096 (19)0.0712 (11)
H0A0.1844−0.06040.55310.085*
O10.0871 (10)0.11115 (17)0.55062 (19)0.0982 (12)
C10.7132 (14)0.0521 (3)0.7869 (3)0.0900 (16)
H1A0.85050.02100.82960.135*
H1B0.52470.07730.80960.135*
H1C0.84590.09650.76560.135*
O20.8180 (10)−0.23224 (19)0.76904 (18)0.0989 (12)
C20.5870 (11)−0.0078 (3)0.7184 (2)0.0619 (11)
O30.9364 (8)−0.11553 (16)0.84573 (16)0.0802 (10)
C30.6177 (10)−0.0982 (2)0.7165 (2)0.0575 (10)
C40.4352 (13)−0.1260 (3)0.6409 (3)0.0781 (14)
C50.3840 (12)0.0144 (2)0.6459 (2)0.0719 (13)
C60.3837 (13)−0.2149 (3)0.6079 (3)0.0840 (15)
H6A0.2464−0.21320.55500.126*
H6B0.2725−0.24870.64600.126*
H6C0.5989−0.24010.60150.126*
C70.2893 (14)0.0965 (3)0.6142 (3)0.0825 (15)
H7A0.38570.14370.64320.099*
C80.7874 (12)−0.1552 (3)0.7771 (2)0.0656 (11)
C91.1202 (13)−0.1682 (3)0.9080 (2)0.0797 (14)
H9A1.3017−0.19810.88520.096*
H9B0.9713−0.21050.92830.096*
C101.2602 (13)−0.1105 (3)0.9765 (3)0.0888 (15)
H10A1.3865−0.14371.01950.133*
H10B1.0782−0.08150.99880.133*
H10C1.4063−0.06880.95560.133*
U11U22U33U12U13U23
N0.073 (3)0.071 (2)0.0652 (18)0.004 (2)−0.0076 (18)0.0032 (16)
O10.125 (3)0.0727 (18)0.0864 (19)0.006 (2)−0.029 (2)0.0039 (15)
C10.110 (5)0.072 (3)0.086 (3)−0.002 (3)0.001 (3)−0.004 (2)
O20.130 (4)0.0705 (19)0.092 (2)0.009 (2)−0.004 (2)−0.0027 (15)
C20.053 (3)0.076 (3)0.0595 (19)0.001 (2)0.0175 (18)0.0012 (18)
O30.094 (3)0.0629 (16)0.0791 (18)0.0052 (19)−0.0082 (17)0.0004 (14)
C30.047 (3)0.069 (2)0.060 (2)−0.007 (2)0.0210 (18)0.0007 (17)
C40.088 (4)0.069 (3)0.077 (3)−0.020 (3)0.007 (2)0.002 (2)
C50.071 (3)0.055 (2)0.083 (3)0.010 (2)−0.017 (2)−0.002 (2)
C60.094 (4)0.071 (3)0.086 (3)−0.011 (3)0.003 (3)−0.017 (2)
C70.101 (4)0.075 (3)0.069 (2)−0.009 (3)0.001 (3)0.003 (2)
C80.061 (3)0.065 (2)0.074 (2)0.002 (3)0.020 (2)−0.002 (2)
C90.090 (4)0.068 (2)0.077 (3)0.012 (3)−0.003 (3)0.003 (2)
C100.084 (4)0.089 (3)0.091 (3)0.012 (3)−0.003 (3)0.007 (2)
N—C41.304 (5)C3—C81.432 (5)
N—C51.370 (5)C4—C61.489 (5)
N—H0A0.8600C5—C71.412 (5)
O1—C71.250 (5)C6—H6A0.9600
C1—C21.490 (5)C6—H6B0.9600
C1—H1A0.9600C6—H6C0.9600
C1—H1B0.9600C7—H7A0.9300
C1—H1C0.9600C9—C101.484 (5)
O2—C81.214 (4)C9—H9A0.9700
C2—C51.388 (5)C9—H9B0.9700
C2—C31.414 (5)C10—H10A0.9600
O3—C81.346 (4)C10—H10B0.9600
O3—C91.431 (4)C10—H10C0.9600
C3—C41.415 (5)
C4—N—C5110.5 (3)C4—C6—H6B109.5
C4—N—H0A124.7H6A—C6—H6B109.5
C5—N—H0A124.7C4—C6—H6C109.5
C2—C1—H1A109.5H6A—C6—H6C109.5
C2—C1—H1B109.5H6B—C6—H6C109.5
H1A—C1—H1B109.5O1—C7—C5125.6 (4)
C2—C1—H1C109.5O1—C7—H7A117.2
H1A—C1—H1C109.5C5—C7—H7A117.2
H1B—C1—H1C109.5O2—C8—O3120.2 (4)
C5—C2—C3105.8 (3)O2—C8—C3125.7 (4)
C5—C2—C1125.8 (4)O3—C8—C3114.0 (3)
C3—C2—C1128.1 (4)O3—C9—C10107.2 (3)
C8—O3—C9117.2 (3)O3—C9—H9A110.3
C2—C3—C4106.7 (3)C10—C9—H9A110.3
C2—C3—C8129.5 (4)O3—C9—H9B110.3
C4—C3—C8123.7 (4)C10—C9—H9B110.3
N—C4—C3108.5 (3)H9A—C9—H9B108.5
N—C4—C6122.5 (4)C9—C10—H10A109.5
C3—C4—C6129.0 (4)C9—C10—H10B109.5
N—C5—C2108.5 (3)H10A—C10—H10B109.5
N—C5—C7121.8 (3)C9—C10—H10C109.5
C2—C5—C7129.5 (4)H10A—C10—H10C109.5
C4—C6—H6A109.5H10B—C10—H10C109.5
C5—C2—C3—C41.3 (5)C1—C2—C5—N−176.2 (4)
C1—C2—C3—C4175.6 (5)C3—C2—C5—C7−175.8 (5)
C5—C2—C3—C8−177.2 (4)C1—C2—C5—C79.7 (8)
C1—C2—C3—C8−2.9 (8)N—C5—C7—O111.4 (8)
C5—N—C4—C3−0.7 (5)C2—C5—C7—O1−175.2 (5)
C5—N—C4—C6178.6 (5)C9—O3—C8—O2−1.6 (7)
C2—C3—C4—N−0.4 (5)C9—O3—C8—C3−178.1 (4)
C8—C3—C4—N178.2 (4)C2—C3—C8—O2−175.8 (5)
C2—C3—C4—C6−179.6 (5)C4—C3—C8—O25.8 (8)
C8—C3—C4—C6−0.9 (8)C2—C3—C8—O30.4 (7)
C4—N—C5—C21.6 (5)C4—C3—C8—O3−177.9 (4)
C4—N—C5—C7176.2 (5)C8—O3—C9—C10179.8 (4)
C3—C2—C5—N−1.7 (5)
D—H···AD—HH···AD···AD—H···A
N—H0A···O1i0.862.042.864 (5)159
C1—H1A···O30.962.162.882 (5)131
C6—H6A···O1i0.962.583.401 (6)143
C7—H7A···O2ii0.932.603.525 (6)176
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N—H0A⋯O1i0.862.042.864 (5)159
C1—H1A⋯O30.962.162.882 (5)131
C6—H6A⋯O1i0.962.583.401 (6)143
C7—H7A⋯O2ii0.932.603.525 (6)176

Symmetry codes: (i) ; (ii) .

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