Literature DB >> 21202613

N-[2-(2-Methoxyphenyl)benzylidene]-tert-butyl-amine N-oxide.

Jin-Long Wu, Yu Liao, Shan-Lin Liu.   

Abstract

In the mol-ecule of the title compound, C(18)H(21)NO(2), the two benzene rings are oriented at a dihedral angle of 58.19 (3)°. Intra-molecular C-H⋯O hydrogen bonds result in the formation of one six- and one five-membered ring, which adopt twist and envelope conformations, respectively. In the crystal structure, C-H⋯O hydrogen bonds link the mol-ecules.

Entities:  

Year:  2008        PMID: 21202613      PMCID: PMC2961506          DOI: 10.1107/S1600536808014529

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Hamburger & McCay (1989 ▶); Jotti et al. (1992 ▶); Murphy et al. (2003 ▶); Green et al. (2003 ▶); Durand et al. (2007 ▶); Hay et al. (2005 ▶). For related literature, see: Fevig et al. (1996 ▶).

Experimental

Crystal data

C18H21NO2 M = 283.37 Monoclinic, a = 10.2526 (15) Å b = 8.5576 (13) Å c = 10.3333 (16) Å β = 115.742 (3)° V = 816.6 (2) Å3 Z = 2 Mo Kα radiation μ = 0.07 mm−1 T = 296 (1) K 0.30 × 0.28 × 0.09 mm

Data collection

Rigaku R-AXIS RAPID-S diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.968, T max = 0.993 7869 measured reflections 1981 independent reflections 967 reflections with F 2 > 2σ(F 2) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.058 S = 1.00 1981 reflections 191 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.21 e Å−3 Data collection: PROCESS-AUTO (Rigaku, 1998 ▶); cell refinement: PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2004 ▶) and Larson (1970 ▶); program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: CRYSTALS (Betteridge et al., 2003 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: CrystalStructure. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808014529/hk2462sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808014529/hk2462Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H21NO2F000 = 304.00
Mr = 283.37Dx = 1.152 Mg m3
Monoclinic, P21Mo Kα radiation λ = 0.71075 Å
Hall symbol: P 2ybCell parameters from 4871 reflections
a = 10.2526 (15) Åθ = 3.2–27.4º
b = 8.5576 (13) ŵ = 0.08 mm1
c = 10.3333 (16) ÅT = 296 (1) K
β = 115.742 (3)ºPlatelet, colorless
V = 816.6 (2) Å30.30 × 0.28 × 0.09 mm
Z = 2
Rigaku R-AXIS RAPID-S diffractometer967 reflections with F2 > 2σ(F2)
Detector resolution: 10.00 pixels mm-1Rint = 0.035
ω scansθmax = 27.4º
Absorption correction: multi-scan(ABSCOR; Higashi, 1995)h = −13→13
Tmin = 0.968, Tmax = 0.993k = −11→10
7869 measured reflectionsl = −13→13
1981 independent reflections
Refinement on F2  w = 1/[1.0600σ(Fo2)]/(4Fo2)
R[F2 > 2σ(F2)] = 0.034(Δ/σ)max < 0.001
wR(F2) = 0.058Δρmax = 0.23 e Å3
S = 1.00Δρmin = −0.21 e Å3
1981 reflectionsExtinction correction: Larson (1970)
191 parametersExtinction coefficient: 287 (12)
H-atom parameters constrained
Geometry. ENTER SPECIAL DETAILS OF THE MOLECULAR GEOMETRY
Refinement. Refinement using all reflections. The weighted R-factor (wR) and goodness of fit (S) are based on F2. R-factor (gt) are based on F. The threshold expression of F2 > 2.0 σ(F2) is used only for calculating R-factor (gt).
xyzUiso*/Ueq
O10.9021 (2)0.3664 (2)0.8067 (2)0.1211 (8)
O20.89199 (16)0.2119 (2)0.40803 (18)0.0749 (6)
N10.8516 (2)0.2377 (2)0.7378 (2)0.0699 (7)
C10.7579 (2)0.2359 (3)0.6043 (2)0.0539 (7)
C20.6914 (2)0.3714 (3)0.5161 (2)0.0519 (7)
C30.6741 (2)0.5115 (3)0.5752 (2)0.0657 (9)
C40.6018 (2)0.6370 (3)0.4891 (3)0.0749 (9)
C50.5479 (2)0.6233 (3)0.3431 (3)0.0794 (10)
C60.5634 (2)0.4858 (3)0.2821 (2)0.0706 (9)
C70.6339 (2)0.3570 (3)0.3658 (2)0.0552 (8)
C80.6389 (2)0.2103 (3)0.2930 (2)0.0569 (8)
C90.5111 (2)0.1408 (3)0.1954 (2)0.0729 (9)
C100.5107 (3)0.0054 (4)0.1245 (2)0.0890 (11)
C110.6400 (3)−0.0637 (3)0.1491 (2)0.0910 (11)
C120.7694 (3)0.0020 (3)0.2437 (2)0.0775 (10)
C130.7690 (2)0.1373 (3)0.3151 (2)0.0644 (9)
C141.0274 (2)0.1362 (3)0.4454 (3)0.0978 (11)
C150.9129 (2)0.0920 (3)0.8265 (2)0.0704 (9)
C160.8509 (3)−0.0534 (3)0.7407 (3)0.1022 (12)
C171.0746 (2)0.0986 (4)0.8838 (3)0.1160 (12)
C180.8694 (2)0.1013 (4)0.9492 (2)0.1048 (11)
H10.73070.13850.56100.065*
H30.71180.52110.67450.079*
H40.59000.72940.53020.090*
H50.50040.70740.28470.095*
H60.52600.47870.18260.085*
H90.42320.18780.17780.087*
H100.4238−0.03900.06050.107*
H110.6405−0.15580.10160.109*
H120.8566−0.04520.25910.093*
H1411.02700.03610.48730.117*
H1421.04250.12220.36080.117*
H1431.10400.19920.51350.117*
H1610.8724−0.05520.65900.123*
H1620.7479−0.05460.70850.123*
H1630.8929−0.14350.79950.123*
H1711.10860.19910.92630.139*
H1721.11730.01870.95500.139*
H1731.10150.08220.80660.139*
H1810.88920.00330.99930.126*
H1820.76780.12400.91170.126*
H1830.92370.18271.01440.126*
U11U22U33U12U13U23
O10.1395 (18)0.0722 (15)0.0812 (15)−0.0167 (15)−0.0179 (12)−0.0059 (13)
O20.0562 (9)0.0805 (13)0.0934 (13)0.0110 (10)0.0374 (8)−0.0032 (12)
N10.0728 (13)0.0637 (16)0.0555 (14)−0.0094 (14)0.0113 (11)−0.0029 (14)
C10.0509 (11)0.0599 (18)0.0493 (15)−0.0037 (15)0.0203 (11)−0.0017 (15)
C20.0405 (12)0.0608 (18)0.0561 (16)−0.0024 (12)0.0227 (11)−0.0011 (15)
C30.0477 (14)0.078 (2)0.0703 (19)−0.0052 (14)0.0250 (13)−0.0124 (18)
C40.0504 (14)0.068 (2)0.103 (2)0.0064 (15)0.0308 (14)−0.0027 (19)
C50.0627 (16)0.076 (2)0.097 (2)0.0188 (17)0.0328 (16)0.021 (2)
C60.0618 (16)0.082 (2)0.069 (2)0.0091 (15)0.0299 (14)0.0130 (19)
C70.0431 (13)0.0695 (19)0.0572 (17)0.0068 (14)0.0257 (11)0.0083 (17)
C80.0621 (14)0.0682 (19)0.0450 (14)0.0043 (16)0.0274 (12)0.0012 (15)
C90.0699 (17)0.094 (2)0.0497 (16)0.0017 (16)0.0212 (13)−0.0003 (17)
C100.102 (2)0.103 (2)0.0586 (19)−0.015 (2)0.0314 (17)−0.012 (2)
C110.126 (2)0.086 (2)0.067 (2)−0.004 (2)0.0474 (19)−0.0130 (18)
C120.097 (2)0.078 (2)0.069 (2)0.0104 (17)0.0472 (17)0.0009 (18)
C130.0699 (16)0.075 (2)0.0579 (17)0.0022 (16)0.0366 (13)0.0008 (16)
C140.0666 (15)0.105 (2)0.130 (2)0.0198 (18)0.0496 (15)0.008 (2)
C150.0706 (17)0.069 (2)0.0573 (18)0.0000 (17)0.0146 (13)0.0103 (17)
C160.129 (2)0.066 (2)0.087 (2)0.008 (2)0.0230 (19)0.0098 (19)
C170.0771 (17)0.121 (2)0.124 (2)0.003 (2)0.0196 (16)0.033 (2)
C180.113 (2)0.120 (2)0.0668 (19)0.010 (2)0.0254 (17)0.025 (2)
O1—N11.291 (3)C1—H10.930
O2—C131.366 (2)C3—H30.930
O2—C141.425 (3)C4—H40.930
N1—C11.293 (2)C5—H50.930
N1—C151.514 (3)C6—H60.930
C1—C21.450 (3)C9—H90.930
C2—C31.391 (4)C10—H100.930
C2—C71.407 (3)C11—H110.930
C3—C41.386 (3)C12—H120.930
C4—C51.368 (4)C14—H1410.960
C5—C61.376 (4)C14—H1420.960
C6—C71.394 (3)C14—H1430.960
C7—C81.476 (3)C16—H1610.960
C8—C91.393 (3)C16—H1620.960
C8—C131.399 (3)C16—H1630.960
C9—C101.370 (4)C17—H1710.960
C10—C111.371 (5)C17—H1720.960
C11—C121.381 (3)C17—H1730.960
C12—C131.373 (4)C18—H1810.960
C15—C161.499 (3)C18—H1820.960
C15—C171.500 (3)C18—H1830.960
C15—C181.518 (4)
C13—O2—C14118.1 (2)C4—C5—H5119.8
O1—N1—C1122.2 (2)C6—C5—H5119.8
O1—N1—C15114.02 (18)C5—C6—H6119.2
C1—N1—C15123.8 (2)C7—C6—H6119.2
N1—C1—C2126.1 (2)C8—C9—H9118.9
C1—C2—C3121.9 (2)C10—C9—H9118.9
C1—C2—C7118.8 (2)C9—C10—H10120.4
C3—C2—C7119.2 (2)C11—C10—H10120.4
C2—C3—C4121.4 (2)C10—C11—H11119.7
C3—C4—C5119.2 (2)C12—C11—H11119.7
C4—C5—C6120.5 (2)C11—C12—H12120.1
C5—C6—C7121.6 (2)C13—C12—H12120.1
C2—C7—C6118.1 (2)O2—C14—H141109.5
C2—C7—C8123.1 (2)O2—C14—H142109.5
C6—C7—C8118.7 (2)O2—C14—H143109.5
C7—C8—C9120.2 (2)H141—C14—H142109.5
C7—C8—C13122.56 (19)H141—C14—H143109.5
C9—C8—C13117.3 (2)H142—C14—H143109.5
C8—C9—C10122.1 (2)C15—C16—H161109.5
C9—C10—C11119.2 (2)C15—C16—H162109.5
C10—C11—C12120.7 (3)C15—C16—H163109.5
C11—C12—C13119.9 (3)H161—C16—H162109.5
O2—C13—C8115.4 (2)H161—C16—H163109.5
O2—C13—C12123.7 (2)H162—C16—H163109.5
C8—C13—C12120.9 (2)C15—C17—H171109.5
N1—C15—C16111.56 (19)C15—C17—H172109.5
N1—C15—C17107.7 (2)C15—C17—H173109.5
N1—C15—C18105.5 (2)H171—C17—H172109.5
C16—C15—C17112.1 (2)H171—C17—H173109.5
C16—C15—C18109.6 (2)H172—C17—H173109.5
C17—C15—C18110.1 (2)C15—C18—H181109.5
N1—C1—H1116.9C15—C18—H182109.5
C2—C1—H1116.9C15—C18—H183109.5
C2—C3—H3119.3H181—C18—H182109.5
C4—C3—H3119.3H181—C18—H183109.5
C3—C4—H4120.4H182—C18—H183109.5
C5—C4—H4120.4
C14—O2—C13—C8174.2 (2)C3—C4—C5—C60.9 (4)
C14—O2—C13—C12−7.4 (4)C4—C5—C6—C7−0.1 (3)
O1—N1—C1—C2−3.3 (4)C5—C6—C7—C2−0.9 (4)
O1—N1—C15—C16−179.7 (2)C5—C6—C7—C8176.3 (2)
O1—N1—C15—C17−56.2 (3)C2—C7—C8—C9121.0 (2)
O1—N1—C15—C1861.4 (2)C2—C7—C8—C13−60.5 (4)
C1—N1—C15—C16−0.3 (4)C6—C7—C8—C9−56.0 (3)
C1—N1—C15—C17123.2 (2)C6—C7—C8—C13122.5 (2)
C1—N1—C15—C18−119.2 (2)C7—C8—C9—C10179.5 (2)
C15—N1—C1—C2177.4 (2)C7—C8—C13—O2−0.6 (4)
N1—C1—C2—C3−26.8 (4)C7—C8—C13—C12−179.0 (2)
N1—C1—C2—C7157.7 (2)C9—C8—C13—O2178.0 (2)
C1—C2—C3—C4−175.7 (2)C9—C8—C13—C12−0.5 (4)
C1—C2—C7—C6176.6 (2)C13—C8—C9—C100.9 (4)
C1—C2—C7—C8−0.5 (3)C8—C9—C10—C11−0.5 (5)
C3—C2—C7—C61.0 (3)C9—C10—C11—C12−0.2 (4)
C3—C2—C7—C8−176.1 (2)C10—C11—C12—C130.6 (5)
C7—C2—C3—C4−0.2 (3)C11—C12—C13—O2−178.5 (2)
C2—C3—C4—C5−0.8 (4)C11—C12—C13—C8−0.2 (4)
D—H···AD—HH···AD···AD—H···A
C3—H3···O10.932.262.806 (3)117
C17—H171···O10.962.412.791 (3)104
C18—H181···O1i0.962.503.280 (3)139
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3⋯O10.932.262.806 (3)117
C17—H171⋯O10.962.412.791 (3)104
C18—H181⋯O1i0.962.503.280 (3)139

Symmetry code: (i) .

  7 in total

1.  Design, synthesis, and in vitro evaluation of cyclic nitrones as free radical traps for the treatment of stroke.

Authors:  T L Fevig; S M Bowen; D A Janowick; B K Jones; H R Munson; D F Ohlweiler; C E Thomas
Journal:  J Med Chem       Date:  1996-12-06       Impact factor: 7.446

2.  Development of a new EPR spin trap, DOD-8C (N-[4-dodecyloxy-2-(7'-carboxyhept-1'-yloxy)benzylidene]-N-tert-butylamine N-oxide), for the trapping of lipid radicals at a predetermined depth within biological membranes.

Authors:  Alison Hay; Mark J Burkitt; Clare M Jones; Richard C Hartley
Journal:  Arch Biochem Biophys       Date:  2005-03-15       Impact factor: 4.013

3.  Superoxide activates uncoupling proteins by generating carbon-centered radicals and initiating lipid peroxidation: studies using a mitochondria-targeted spin trap derived from alpha-phenyl-N-tert-butylnitrone.

Authors:  Michael P Murphy; Karim S Echtay; Frances H Blaikie; Jordi Asin-Cayuela; Helena M Cocheme; Katherine Green; Julie A Buckingham; Ellen R Taylor; Fiona Hurrell; Gillian Hughes; Satomi Miwa; Christopher E Cooper; Dimitri A Svistunenko; Robin A J Smith; Martin D Brand
Journal:  J Biol Chem       Date:  2003-09-12       Impact factor: 5.157

Review 4.  Nitrones as neuroprotective agents in cerebral ischemia, with particular reference to NXY-059.

Authors:  A Richard Green; Tim Ashwood; Tomas Odergren; David M Jackson
Journal:  Pharmacol Ther       Date:  2003-12       Impact factor: 12.310

5.  Cardiotoxicity induced by doxorubicin in vivo: protective activity of the spin trap alpha-phenyl-tert-butyl nitrone.

Authors:  A Jotti; L Paracchini; G Perletti; F Piccinini
Journal:  Pharmacol Res       Date:  1992-09       Impact factor: 7.658

6.  Fine-tuning the amphiphilicity: a crucial parameter in the design of potent alpha-phenyl-N-tert-butylnitrone analogues.

Authors:  Grégory Durand; Burkhard Poeggeler; Jutta Böker; Simon Raynal; Ange Polidori; Miguel A Pappolla; Rüdiger Hardeland; Bernard Pucci
Journal:  J Med Chem       Date:  2007-07-25       Impact factor: 7.446

7.  Endotoxin-induced mortality in rats is reduced by nitrones.

Authors:  S A Hamburger; P B McCay
Journal:  Circ Shock       Date:  1989-12
  7 in total

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