Literature DB >> 21202511

(Benzoato-κO,O')(quinoline-2-carboxyl-ato-κN,O)(quinoline-2-carboxylic acid-κN,O)copper(II).

Nuno D Martins, Manuela Ramos Silva, Joana A Silva, Ana Matos Beja, Abilio J F N Sobral.   

Abstract

The crystal structure of the title compound, [Cu(C(10)H(6)NO(2))(C(7)H(5)O(2))(C(10)H(7)NO(2))], contains copper(II) ions five-coordinated in a distorted trigonal-bipyramidal environment. The equatorial plane is occupied by three O atoms, one from the carboxyl-ate group of the benzoate ion considered as occupying a single coordination site, the other two from two carboxyl-ate groups of the quinaldic acid and quinaldate ligands. The axial positions are occupied by the N atoms of the quinoline ring system. The metal ion lies on a twofold axis that bisects the benzoate ion. The quinaldate and quinaldic acid ligands are equivalent by symmetry, and the carboxyl-ate/carboxyl groups are disordered. The disordered H atom is shared between the carboxyl-ate groups of adjacent quinaldic acid mol-ecules. Such hydrogen bonds delineate zigzag chains that run along the c axis. The structure is very similar to that of the Mn(II) analog.

Entities:  

Year:  2008        PMID: 21202511      PMCID: PMC2961369          DOI: 10.1107/S1600536808014268

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Zurowska et al. (2007 ▶); Dobrzynska et al. (2005 ▶); Kumar & Gandotra (1980 ▶); Catterick et al. (1974 ▶); Martins et al. (2008 ▶).

Experimental

Crystal data

[Cu(C10H6NO2)(C7H5O2)(C10H7NO2)] M = 529.97 Monoclinic, a = 19.1140 (9) Å b = 11.4665 (5) Å c = 12.1885 (8) Å β = 118.788 (1)° V = 2341.2 (2) Å3 Z = 4 Mo Kα radiation μ = 0.98 mm−1 T = 293 (2) K 0.26 × 0.22 × 0.20 mm

Data collection

Bruker APEX CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2000 ▶) T min = 0.75, T max = 0.82 27106 measured reflections 2928 independent reflections 2536 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.104 S = 1.06 2928 reflections 178 parameters H-atom parameters constrained Δρmax = 0.38 e Å−3 Δρmin = −0.32 e Å−3 Data collection: SMART (Bruker, 2003 ▶); cell refinement: SAINT (Bruker, 2003 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPII (Johnson, 1976 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808014268/bt2705sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808014268/bt2705Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(C10H6NO2)(C7H5O2)(C10H7NO2)]F000 = 1084
Mr = 529.97Dx = 1.504 Mg m3
Monoclinic, C2/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 4050 reflections
a = 19.1140 (9) Åθ = 3.2–26.8º
b = 11.4665 (5) ŵ = 0.98 mm1
c = 12.1885 (8) ÅT = 293 (2) K
β = 118.7880 (10)ºBlock, green
V = 2341.2 (2) Å30.26 × 0.22 × 0.20 mm
Z = 4
Bruker APEX CCD area-detector diffractometer2928 independent reflections
Radiation source: fine-focus sealed tube2536 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.019
T = 293(2) Kθmax = 28.4º
φ and ω scansθmin = 2.2º
Absorption correction: multi-scan(SADABS; Sheldrick, 2000)h = −24→25
Tmin = 0.75, Tmax = 0.82k = −15→15
27106 measured reflectionsl = −16→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.037H-atom parameters constrained
wR(F2) = 0.104  w = 1/[σ2(Fo2) + (0.0492P)2 + 2.1952P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
2928 reflectionsΔρmax = 0.38 e Å3
178 parametersΔρmin = −0.32 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Cu10.50000.31494 (3)0.25000.04408 (13)
O10.51571 (18)0.1520 (3)0.3083 (3)0.0467 (7)0.50
O20.47650 (18)0.1264 (3)0.1065 (3)0.0517 (7)0.50
C10.4960 (2)0.0874 (4)0.2116 (3)0.0406 (9)0.50
O30.49011 (9)0.42154 (18)0.10765 (18)0.0766 (6)
H10.52180.44120.08370.115*0.50
O40.39680 (14)0.5024 (3)−0.0713 (3)0.1504 (15)
N10.37963 (10)0.34319 (16)0.15664 (16)0.0460 (4)
C20.5000−0.0419 (3)0.25000.0568 (8)
C30.50955 (16)−0.1029 (3)0.3531 (2)0.0671 (7)
H30.5165−0.06280.42390.080*
C40.50904 (19)−0.2216 (3)0.3528 (3)0.0774 (8)
H40.5149−0.26200.42280.093*
C50.5000−0.2814 (3)0.25000.0767 (11)
H50.5000−0.36250.25000.092*
C60.41763 (13)0.4477 (2)0.0220 (2)0.0563 (5)
C70.35528 (12)0.40982 (19)0.05672 (19)0.0492 (5)
C80.27586 (13)0.4476 (2)−0.0157 (2)0.0631 (6)
H80.26090.4935−0.08650.076*
C90.22163 (14)0.4154 (3)0.0204 (3)0.0690 (7)
H90.16880.4392−0.02600.083*
C100.24486 (14)0.3469 (2)0.1267 (3)0.0632 (6)
C110.19152 (17)0.3123 (3)0.1708 (4)0.0827 (9)
H110.13850.33610.12800.099*
C120.21650 (19)0.2459 (4)0.2729 (4)0.0950 (11)
H120.18070.22460.30070.114*
C130.2958 (2)0.2080 (3)0.3386 (3)0.0862 (9)
H130.31220.16170.40950.103*
C140.34976 (15)0.2385 (3)0.2997 (2)0.0657 (6)
H140.40220.21220.34310.079*
C150.32525 (13)0.30941 (19)0.1942 (2)0.0522 (5)
U11U22U33U12U13U23
Cu10.03721 (19)0.03809 (19)0.0498 (2)0.0000.01525 (15)0.000
O10.0443 (16)0.0374 (16)0.0491 (16)−0.0029 (13)0.0152 (13)−0.0017 (14)
O20.0571 (17)0.0465 (17)0.0476 (16)−0.0006 (13)0.0221 (14)0.0053 (13)
C10.0313 (17)0.039 (2)0.047 (2)0.0006 (17)0.015 (2)−0.0005 (15)
O30.0441 (8)0.0868 (13)0.0932 (13)0.0102 (8)0.0286 (8)0.0495 (11)
O40.0687 (14)0.217 (4)0.144 (2)0.0178 (17)0.0337 (15)0.124 (2)
N10.0362 (8)0.0478 (9)0.0496 (9)−0.0066 (7)0.0172 (7)−0.0082 (7)
C20.0363 (13)0.0389 (15)0.094 (2)0.0000.0301 (15)0.000
C30.0658 (15)0.0756 (17)0.0649 (14)−0.0121 (13)0.0356 (12)−0.0229 (13)
C40.087 (2)0.0765 (18)0.0623 (15)−0.0115 (15)0.0309 (14)0.0163 (14)
C50.080 (3)0.0383 (16)0.092 (3)0.0000.026 (2)0.000
C60.0461 (11)0.0635 (14)0.0533 (11)−0.0014 (10)0.0192 (9)0.0046 (10)
C70.0401 (10)0.0490 (11)0.0510 (11)−0.0015 (8)0.0158 (8)−0.0064 (9)
C80.0441 (11)0.0684 (15)0.0636 (13)0.0069 (10)0.0155 (10)−0.0013 (12)
C90.0395 (11)0.0742 (17)0.0812 (17)0.0045 (11)0.0194 (11)−0.0122 (14)
C100.0425 (11)0.0688 (15)0.0784 (16)−0.0107 (10)0.0291 (11)−0.0234 (13)
C110.0506 (14)0.101 (2)0.105 (2)−0.0152 (14)0.0443 (16)−0.0185 (19)
C120.0675 (18)0.126 (3)0.114 (3)−0.0322 (19)0.0611 (19)−0.022 (2)
C130.0775 (19)0.106 (3)0.088 (2)−0.0260 (17)0.0494 (17)0.0001 (17)
C140.0536 (13)0.0770 (17)0.0695 (14)−0.0168 (12)0.0320 (12)−0.0058 (13)
C150.0416 (10)0.0560 (13)0.0595 (12)−0.0126 (9)0.0247 (9)−0.0154 (10)
Cu1—O1i1.970 (3)C3—C41.361 (4)
Cu1—O11.970 (3)C3—H30.9300
Cu1—N12.0424 (16)C4—C51.364 (4)
Cu1—N1i2.0424 (16)C4—H40.9300
Cu1—O3i2.0553 (16)C5—C4i1.364 (4)
Cu1—O32.0553 (16)C5—H50.9300
O1—C1i0.777 (4)C6—C71.508 (3)
O1—O2i1.018 (4)C7—C81.407 (3)
O1—O1i1.249 (7)C8—C91.358 (4)
O1—C11.285 (4)C8—H80.9300
O2—O1i1.018 (4)C9—C101.392 (4)
O2—C11.233 (5)C9—H90.9300
C1—O1i0.777 (4)C10—C151.416 (3)
C1—C1i0.872 (8)C10—C111.419 (4)
C1—C21.545 (5)C11—C121.336 (5)
O3—C61.306 (3)C11—H110.9300
O3—H10.8200C12—C131.400 (5)
O4—C61.187 (3)C12—H120.9300
N1—C71.318 (3)C13—C141.371 (4)
N1—C151.378 (3)C13—H130.9300
C2—C3i1.372 (3)C14—C151.398 (4)
C2—C31.372 (3)C14—H140.9300
C2—C1i1.545 (5)
O1i—Cu1—O136.95 (19)C3—C2—C1i104.3 (2)
O1i—Cu1—N190.82 (10)C4—C3—C2120.7 (2)
O1—Cu1—N1106.65 (10)C4—C3—H3119.6
O1i—Cu1—N1i106.65 (10)C2—C3—H3119.6
O1—Cu1—N1i90.82 (10)C3—C4—C5120.2 (3)
N1—Cu1—N1i161.74 (10)C3—C4—H4119.9
O1i—Cu1—O3i143.58 (12)C5—C4—H4119.9
O1—Cu1—O3i108.87 (12)C4i—C5—C4119.6 (4)
N1—Cu1—O3i89.83 (7)C4i—C5—H5120.2
N1i—Cu1—O3i79.30 (7)C4—C5—H5120.2
O1i—Cu1—O3108.87 (12)O4—C6—O3128.6 (2)
O1—Cu1—O3143.58 (12)O4—C6—C7118.4 (2)
N1—Cu1—O379.30 (7)O3—C6—C7112.78 (19)
N1i—Cu1—O389.83 (7)N1—C7—C8123.5 (2)
O3i—Cu1—O3107.02 (13)N1—C7—C6116.81 (18)
C1i—O1—O2i85.6 (5)C8—C7—C6119.6 (2)
O2i—O1—O1i156.1 (4)C9—C8—C7118.3 (2)
O2i—O1—C1127.1 (3)C9—C8—H8120.9
C1i—O1—Cu1145.0 (5)C7—C8—H8120.9
O2i—O1—Cu1124.3 (3)C8—C9—C10120.3 (2)
O1i—O1—Cu171.52 (10)C8—C9—H9119.9
C1—O1—Cu1106.8 (3)C10—C9—H9119.9
O1i—C1—C1i102.2 (5)C9—C10—C15118.9 (2)
O1i—C1—O255.5 (4)C9—C10—C11123.0 (3)
C1i—C1—O2157.5 (4)C15—C10—C11118.1 (3)
O1i—C1—O169.6 (5)C12—C11—C10120.8 (3)
O2—C1—O1123.6 (4)C12—C11—H11119.6
O1i—C1—C2166.6 (5)C10—C11—H11119.6
C1i—C1—C273.61 (15)C11—C12—C13120.8 (3)
O2—C1—C2127.5 (4)C11—C12—H12119.6
O1—C1—C2109.0 (3)C13—C12—H12119.6
C6—O3—Cu1116.24 (14)C14—C13—C12120.7 (3)
C6—O3—H1109.5C14—C13—H13119.7
Cu1—O3—H1132.9C12—C13—H13119.7
C7—N1—C15118.85 (18)C13—C14—C15119.5 (3)
C7—N1—Cu1114.11 (14)C13—C14—H14120.3
C15—N1—Cu1126.73 (15)C15—C14—H14120.3
C3i—C2—C3118.6 (3)N1—C15—C14119.8 (2)
C3i—C2—C1104.3 (2)N1—C15—C10120.2 (2)
C3—C2—C1137.1 (2)C14—C15—C10120.0 (2)
C3i—C2—C1i137.1 (2)
O1i—Cu1—O1—C1i−15.7 (7)O3i—Cu1—N1—C15−65.38 (18)
N1—Cu1—O1—C1i52.4 (9)O3—Cu1—N1—C15−172.74 (19)
N1i—Cu1—O1—C1i−132.9 (8)O1i—C1—C2—C3i108 (2)
O3i—Cu1—O1—C1i148.1 (8)C1i—C1—C2—C3i−179.0 (5)
O3—Cu1—O1—C1i−42.1 (9)O2—C1—C2—C3i9.9 (5)
O1i—Cu1—O1—O2i−159.9 (6)O1—C1—C2—C3i−170.9 (3)
N1—Cu1—O1—O2i−91.8 (4)O1i—C1—C2—C3−72 (2)
N1i—Cu1—O1—O2i82.8 (4)C1i—C1—C2—C31.4 (7)
O3i—Cu1—O1—O2i3.9 (4)O2—C1—C2—C3−169.7 (3)
O3—Cu1—O1—O2i173.7 (3)O1—C1—C2—C39.5 (4)
N1—Cu1—O1—O1i68.1 (3)O1i—C1—C2—C1i−73 (2)
N1i—Cu1—O1—O1i−117.2 (3)O2—C1—C2—C1i−171.1 (9)
O3i—Cu1—O1—O1i163.8 (3)O1—C1—C2—C1i8.2 (3)
O3—Cu1—O1—O1i−26.4 (4)C3i—C2—C3—C4−0.4 (2)
O1i—Cu1—O1—C15.6 (2)C1—C2—C3—C4179.1 (3)
N1—Cu1—O1—C173.7 (3)C1i—C2—C3—C4179.9 (3)
N1i—Cu1—O1—C1−111.6 (2)C2—C3—C4—C50.9 (4)
O3i—Cu1—O1—C1169.4 (2)C3—C4—C5—C4i−0.4 (2)
O3—Cu1—O1—C1−20.8 (3)Cu1—O3—C6—O4−176.0 (3)
O1i—O2—C1—C1i6.7 (16)Cu1—O3—C6—C79.5 (3)
O1i—O2—C1—O1−15.3 (5)C15—N1—C7—C8−0.9 (3)
O1i—O2—C1—C2163.8 (7)Cu1—N1—C7—C8−175.00 (18)
C1i—O1—C1—O1i152.6 (11)C15—N1—C7—C6177.99 (18)
O2i—O1—C1—O1i155.8 (7)Cu1—N1—C7—C63.9 (2)
Cu1—O1—C1—O1i−9.2 (4)O4—C6—C7—N1175.9 (3)
O2i—O1—C1—C1i3.3 (8)O3—C6—C7—N1−9.0 (3)
O1i—O1—C1—C1i−152.6 (11)O4—C6—C7—C8−5.2 (4)
Cu1—O1—C1—C1i−161.7 (7)O3—C6—C7—C8170.0 (2)
C1i—O1—C1—O2166.0 (10)N1—C7—C8—C91.2 (4)
O2i—O1—C1—O2169.3 (3)C6—C7—C8—C9−177.7 (2)
O1i—O1—C1—O213.4 (4)C7—C8—C9—C100.1 (4)
Cu1—O1—C1—O24.2 (5)C8—C9—C10—C15−1.5 (4)
C1i—O1—C1—C2−13.3 (5)C8—C9—C10—C11178.7 (3)
O2i—O1—C1—C2−10.0 (5)C9—C10—C11—C12179.6 (3)
O1i—O1—C1—C2−165.9 (6)C15—C10—C11—C12−0.2 (4)
Cu1—O1—C1—C2−175.0 (2)C10—C11—C12—C13−0.5 (6)
O1i—Cu1—O3—C681.1 (2)C11—C12—C13—C140.1 (6)
O1—Cu1—O3—C697.5 (2)C12—C13—C14—C150.9 (5)
N1—Cu1—O3—C6−6.11 (19)C7—N1—C15—C14179.8 (2)
N1i—Cu1—O3—C6−171.4 (2)Cu1—N1—C15—C14−6.9 (3)
O3i—Cu1—O3—C6−92.6 (2)C7—N1—C15—C10−0.6 (3)
O1i—Cu1—N1—C7−108.25 (18)Cu1—N1—C15—C10172.68 (16)
O1—Cu1—N1—C7−142.16 (17)C13—C14—C15—N1178.1 (2)
N1i—Cu1—N1—C755.17 (14)C13—C14—C15—C10−1.5 (4)
O3i—Cu1—N1—C7108.16 (16)C9—C10—C15—N11.8 (3)
O3—Cu1—N1—C70.80 (15)C11—C10—C15—N1−178.4 (2)
O1i—Cu1—N1—C1578.21 (19)C9—C10—C15—C14−178.6 (2)
O1—Cu1—N1—C1544.3 (2)C11—C10—C15—C141.2 (4)
N1i—Cu1—N1—C15−118.37 (17)
D—H···AD—HH···AD···AD—H···A
O3—H1···O4ii0.821.762.560 (3)165
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H1⋯O4i0.821.762.560 (3)165

Symmetry code: (i) .

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Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2007-12-21
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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-04-13

3.  Beyond the Simple Copper(II) Coordination Chemistry with Quinaldinate and Secondary Amines.

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