Literature DB >> 21202445

3-Ammonio-pyridinium tetra-bromido-mercurate(II) monohydrate.

Basem Fares Ali, Rawhi H Al-Far, Salim F Haddad.   

Abstract

The asymmetric unit of the title compound, (C(5)H(8)N(2))[HgBr(4)]·H(2)O, consists of one cation, one anion and one water mol-ecule. The anion exhibits a distorted tetra-hedral arrangement about the Hg atom. The crystal structure contains alternating sheets of cations (in the ac plane) and stacks of anions. Several strong hydrogen-bonding inter-actions (pyN-H⋯Br and C-H⋯Br; py is pyridine), along with O-H⋯Br inter-actions, connect the sheets of cations to the stacks of anions. Cation-cation π-π stacking is also present (C⋯C distances in the range 3.424-3.865 Å). The shortest Br⋯Br distance is 3.9527 (9) Å.

Entities:  

Year:  2008        PMID: 21202445      PMCID: PMC2961581          DOI: 10.1107/S1600536808012336

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Al-Far & Ali (2007a ▶); Desiraju (1997 ▶). For related literature, see: Al-Far, Ali & Al-Sou’od (2006 ▶); Al-Far & Ali (2007b ▶); Ali & Al-Far (2007a ▶, 2007b ▶, 2008 ▶); Ali, Al-Far & Haddad (2008 ▶). For bond distances see: Orpen et al. (1989 ▶).

Experimental

Crystal data

(C5H8N2)[HgBr4]·H2O M = 634.34 Monoclinic, a = 8.1896 (7) Å b = 14.0245 (12) Å c = 11.5711 (10) Å β = 94.730 (2)° V = 1324.5 (2) Å3 Z = 4 Mo Kα radiation μ = 23.66 mm−1 T = 296 (2) K 0.20 × 0.10 × 0.03 mm

Data collection

Bruker–Siemens SMART APEX diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.034, T max = 0.492 16873 measured reflections 3780 independent reflections 2628 reflections with I > 2σ(I) R int = 0.056

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.074 S = 1.03 3780 reflections 126 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.85 e Å−3 Δρmin = −1.32 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT-Plus (Bruker, 2001 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: XS in SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: XL in SHELXTL; molecular graphics: XP in SHELXTL; software used to prepare material for publication: XCIF in SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808012336/cs2074sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808012336/cs2074Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
(C5H8N2)[HgBr4]·H2OF000 = 1128
Mr = 634.34Dx = 3.181 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 5049 reflections
a = 8.1896 (7) Åθ = 2.3–27.6º
b = 14.0245 (12) ŵ = 23.66 mm1
c = 11.5711 (10) ÅT = 296 (2) K
β = 94.730 (2)ºChunk, pink
V = 1324.5 (2) Å30.20 × 0.10 × 0.03 mm
Z = 4
Bruker–Siemens SMART APEX diffractometer3780 independent reflections
Radiation source: fine-focus sealed tube2628 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.056
Detector resolution: 8.3 pixels mm-1θmax = 30.1º
T = 296(2) Kθmin = 2.3º
ω scansh = −11→11
Absorption correction: multi-scan(SADABS; Bruker, 2001)k = −19→19
Tmin = 0.034, Tmax = 0.492l = −16→16
16873 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.035H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.074  w = 1/[σ2(Fo2) + (0.018P)2 + 0.74P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max = 0.001
3780 reflectionsΔρmax = 0.85 e Å3
126 parametersΔρmin = −1.32 e Å3
3 restraintsExtinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.00271 (13)
xyzUiso*/Ueq
O10.8331 (6)0.5315 (4)0.4741 (5)0.0770 (15)
H10.883 (9)0.575 (4)0.433 (5)0.116*
H20.802 (10)0.560 (4)0.538 (4)0.116*
Hg10.68459 (3)0.763019 (18)0.84039 (2)0.05085 (10)
Br10.95522 (7)0.85483 (4)0.89061 (5)0.04424 (15)
Br20.53644 (7)0.74688 (4)1.03273 (5)0.04900 (16)
Br30.74834 (8)0.59454 (4)0.75688 (5)0.05157 (17)
Br40.45943 (8)0.83129 (5)0.69416 (6)0.0622 (2)
N10.8418 (6)0.9030 (4)0.1560 (4)0.0506 (13)
H1A0.78840.94470.10890.076*
H1B0.81810.84400.13170.076*
H1C0.94920.91280.15600.076*
C20.7926 (6)0.9151 (4)0.2726 (4)0.0337 (11)
C30.6981 (6)0.8466 (4)0.3172 (5)0.0413 (13)
H30.66370.79340.27370.050*
N40.6563 (6)0.8582 (4)0.4258 (4)0.0501 (12)
H40.59570.81580.45470.060*
C50.7057 (7)0.9339 (4)0.4914 (5)0.0462 (14)
H50.67640.93900.56720.055*
C60.7989 (7)1.0030 (4)0.4463 (5)0.0424 (13)
H60.83181.05620.49030.051*
C70.8433 (7)0.9933 (4)0.3356 (5)0.0419 (13)
H70.90741.03950.30360.050*
U11U22U33U12U13U23
O10.061 (3)0.073 (4)0.096 (4)−0.012 (3)0.003 (3)−0.027 (3)
Hg10.04444 (15)0.05348 (17)0.05300 (16)−0.00161 (11)−0.00571 (10)−0.00193 (11)
Br10.0406 (3)0.0417 (3)0.0508 (3)−0.0052 (2)0.0063 (2)−0.0018 (2)
Br20.0451 (3)0.0563 (4)0.0451 (3)−0.0050 (3)0.0014 (3)−0.0036 (3)
Br30.0573 (4)0.0473 (4)0.0506 (3)−0.0023 (3)0.0077 (3)−0.0071 (3)
Br40.0454 (3)0.0673 (5)0.0713 (4)−0.0031 (3)−0.0099 (3)0.0294 (3)
N10.053 (3)0.061 (3)0.037 (3)0.010 (2)0.003 (2)0.000 (2)
C20.034 (3)0.039 (3)0.027 (2)0.008 (2)−0.001 (2)0.002 (2)
C30.030 (3)0.040 (3)0.053 (3)−0.004 (2)−0.003 (2)−0.012 (3)
N40.041 (3)0.048 (3)0.062 (3)−0.009 (2)0.007 (2)0.003 (2)
C50.045 (3)0.057 (4)0.036 (3)0.001 (3)0.003 (2)−0.004 (3)
C60.045 (3)0.038 (3)0.044 (3)−0.003 (2)−0.001 (3)−0.009 (2)
C70.045 (3)0.034 (3)0.047 (3)0.000 (2)0.006 (3)0.006 (2)
O1—H10.89 (6)C2—C31.362 (7)
O1—H20.89 (6)C3—N41.339 (7)
Hg1—Br42.5818 (7)C3—H30.9300
Hg1—Br12.5875 (6)N4—C51.349 (7)
Hg1—Br32.6216 (7)N4—H40.8600
Hg1—Br22.6309 (7)C5—C61.364 (8)
N1—C21.450 (6)C5—H50.9300
N1—H1A0.8900C6—C71.367 (7)
N1—H1B0.8900C6—H60.9300
N1—H1C0.8900C7—H70.9300
C2—C71.363 (7)
H1—O1—H2108 (5)N4—C3—C2117.8 (5)
Br4—Hg1—Br1120.99 (2)N4—C3—H3121.1
Br4—Hg1—Br3104.23 (2)C2—C3—H3121.1
Br1—Hg1—Br3109.78 (2)C3—N4—C5122.4 (5)
Br4—Hg1—Br2103.42 (2)C3—N4—H4118.8
Br1—Hg1—Br2107.40 (2)C5—N4—H4118.8
Br3—Hg1—Br2110.73 (2)N4—C5—C6119.7 (5)
C2—N1—H1A109.5N4—C5—H5120.2
C2—N1—H1B109.5C6—C5—H5120.2
H1A—N1—H1B109.5C5—C6—C7119.3 (5)
C2—N1—H1C109.5C5—C6—H6120.4
H1A—N1—H1C109.5C7—C6—H6120.4
H1B—N1—H1C109.5C2—C7—C6119.2 (5)
C7—C2—C3121.6 (5)C2—C7—H7120.4
C7—C2—N1119.7 (5)C6—C7—H7120.4
C3—C2—N1118.7 (5)
C7—C2—C3—N4−0.2 (8)N4—C5—C6—C7−1.3 (9)
N1—C2—C3—N4178.8 (5)C3—C2—C7—C60.3 (8)
C2—C3—N4—C5−0.7 (8)N1—C2—C7—C6−178.7 (5)
C3—N4—C5—C61.4 (9)C5—C6—C7—C20.4 (8)
D—H···AD—HH···AD···AD—H···A
O1—H1···Br2i0.89 (6)2.98 (6)3.564 (5)125 (5)
O1—H2···Br30.89 (6)2.65 (3)3.513 (5)162 (7)
N1—H1A···O1ii0.891.802.686 (7)174
N1—H1B···Br4i0.892.793.442 (5)132
N1—H1B···Br2iii0.892.843.535 (5)136
N1—H1C···Br3i0.892.633.436 (5)152
N4—H4···Br1iv0.862.733.419 (5)138
Hg1—Br42.5818 (7)
Hg1—Br12.5875 (6)
Hg1—Br32.6216 (7)
Hg1—Br22.6309 (7)
Br4—Hg1—Br1120.99 (2)
Br4—Hg1—Br3104.23 (2)
Br1—Hg1—Br3109.78 (2)
Br4—Hg1—Br2103.42 (2)
Br1—Hg1—Br2107.40 (2)
Br3—Hg1—Br2110.73 (2)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯Br2i0.89 (6)2.98 (6)3.564 (5)125 (5)
O1—H2⋯Br30.89 (6)2.65 (3)3.513 (5)162 (7)
N1—H1A⋯O1ii0.891.802.686 (7)174
N1—H1B⋯Br4i0.892.793.442 (5)132
N1—H1B⋯Br2iii0.892.843.535 (5)136
N1—H1C⋯Br3i0.892.633.436 (5)152
N4—H4⋯Br1iv0.862.733.419 (5)138

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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