| Literature DB >> 21202445 |
Basem Fares Ali, Rawhi H Al-Far, Salim F Haddad.
Abstract
The asymmetric unit of the title compound, (C(5)H(8)N(2))[HgBr(4)]·H(2)O, consists of one cation, one anion and one water mol-ecule. The anion exhibits a distorted tetra-hedral arrangement about the Hg atom. The crystal structure contains alternating sheets of cations (in the ac plane) and stacks of anions. Several strong hydrogen-bonding inter-actions (pyN-H⋯Br and C-H⋯Br; py is pyridine), along with O-H⋯Br inter-actions, connect the sheets of cations to the stacks of anions. Cation-cation π-π stacking is also present (C⋯C distances in the range 3.424-3.865 Å). The shortest Br⋯Br distance is 3.9527 (9) Å.Entities:
Year: 2008 PMID: 21202445 PMCID: PMC2961581 DOI: 10.1107/S1600536808012336
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| (C5H8N2)[HgBr4]·H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 5049 reflections |
| θ = 2.3–27.6º | |
| µ = 23.66 mm−1 | |
| β = 94.730 (2)º | Chunk, pink |
| 0.20 × 0.10 × 0.03 mm | |
| Bruker–Siemens SMART APEX diffractometer | 3780 independent reflections |
| Radiation source: fine-focus sealed tube | 2628 reflections with |
| Monochromator: graphite | |
| Detector resolution: 8.3 pixels mm-1 | θmax = 30.1º |
| θmin = 2.3º | |
| ω scans | |
| Absorption correction: multi-scan(SADABS; Bruker, 2001) | |
| 16873 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max = 0.001 | |
| 3780 reflections | Δρmax = 0.85 e Å−3 |
| 126 parameters | Δρmin = −1.32 e Å−3 |
| 3 restraints | Extinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.00271 (13) |
| O1 | 0.8331 (6) | 0.5315 (4) | 0.4741 (5) | 0.0770 (15) | |
| H1 | 0.883 (9) | 0.575 (4) | 0.433 (5) | 0.116* | |
| H2 | 0.802 (10) | 0.560 (4) | 0.538 (4) | 0.116* | |
| Hg1 | 0.68459 (3) | 0.763019 (18) | 0.84039 (2) | 0.05085 (10) | |
| Br1 | 0.95522 (7) | 0.85483 (4) | 0.89061 (5) | 0.04424 (15) | |
| Br2 | 0.53644 (7) | 0.74688 (4) | 1.03273 (5) | 0.04900 (16) | |
| Br3 | 0.74834 (8) | 0.59454 (4) | 0.75688 (5) | 0.05157 (17) | |
| Br4 | 0.45943 (8) | 0.83129 (5) | 0.69416 (6) | 0.0622 (2) | |
| N1 | 0.8418 (6) | 0.9030 (4) | 0.1560 (4) | 0.0506 (13) | |
| H1A | 0.7884 | 0.9447 | 0.1089 | 0.076* | |
| H1B | 0.8181 | 0.8440 | 0.1317 | 0.076* | |
| H1C | 0.9492 | 0.9128 | 0.1560 | 0.076* | |
| C2 | 0.7926 (6) | 0.9151 (4) | 0.2726 (4) | 0.0337 (11) | |
| C3 | 0.6981 (6) | 0.8466 (4) | 0.3172 (5) | 0.0413 (13) | |
| H3 | 0.6637 | 0.7934 | 0.2737 | 0.050* | |
| N4 | 0.6563 (6) | 0.8582 (4) | 0.4258 (4) | 0.0501 (12) | |
| H4 | 0.5957 | 0.8158 | 0.4547 | 0.060* | |
| C5 | 0.7057 (7) | 0.9339 (4) | 0.4914 (5) | 0.0462 (14) | |
| H5 | 0.6764 | 0.9390 | 0.5672 | 0.055* | |
| C6 | 0.7989 (7) | 1.0030 (4) | 0.4463 (5) | 0.0424 (13) | |
| H6 | 0.8318 | 1.0562 | 0.4903 | 0.051* | |
| C7 | 0.8433 (7) | 0.9933 (4) | 0.3356 (5) | 0.0419 (13) | |
| H7 | 0.9074 | 1.0395 | 0.3036 | 0.050* |
| O1 | 0.061 (3) | 0.073 (4) | 0.096 (4) | −0.012 (3) | 0.003 (3) | −0.027 (3) |
| Hg1 | 0.04444 (15) | 0.05348 (17) | 0.05300 (16) | −0.00161 (11) | −0.00571 (10) | −0.00193 (11) |
| Br1 | 0.0406 (3) | 0.0417 (3) | 0.0508 (3) | −0.0052 (2) | 0.0063 (2) | −0.0018 (2) |
| Br2 | 0.0451 (3) | 0.0563 (4) | 0.0451 (3) | −0.0050 (3) | 0.0014 (3) | −0.0036 (3) |
| Br3 | 0.0573 (4) | 0.0473 (4) | 0.0506 (3) | −0.0023 (3) | 0.0077 (3) | −0.0071 (3) |
| Br4 | 0.0454 (3) | 0.0673 (5) | 0.0713 (4) | −0.0031 (3) | −0.0099 (3) | 0.0294 (3) |
| N1 | 0.053 (3) | 0.061 (3) | 0.037 (3) | 0.010 (2) | 0.003 (2) | 0.000 (2) |
| C2 | 0.034 (3) | 0.039 (3) | 0.027 (2) | 0.008 (2) | −0.001 (2) | 0.002 (2) |
| C3 | 0.030 (3) | 0.040 (3) | 0.053 (3) | −0.004 (2) | −0.003 (2) | −0.012 (3) |
| N4 | 0.041 (3) | 0.048 (3) | 0.062 (3) | −0.009 (2) | 0.007 (2) | 0.003 (2) |
| C5 | 0.045 (3) | 0.057 (4) | 0.036 (3) | 0.001 (3) | 0.003 (2) | −0.004 (3) |
| C6 | 0.045 (3) | 0.038 (3) | 0.044 (3) | −0.003 (2) | −0.001 (3) | −0.009 (2) |
| C7 | 0.045 (3) | 0.034 (3) | 0.047 (3) | 0.000 (2) | 0.006 (3) | 0.006 (2) |
| O1—H1 | 0.89 (6) | C2—C3 | 1.362 (7) |
| O1—H2 | 0.89 (6) | C3—N4 | 1.339 (7) |
| Hg1—Br4 | 2.5818 (7) | C3—H3 | 0.9300 |
| Hg1—Br1 | 2.5875 (6) | N4—C5 | 1.349 (7) |
| Hg1—Br3 | 2.6216 (7) | N4—H4 | 0.8600 |
| Hg1—Br2 | 2.6309 (7) | C5—C6 | 1.364 (8) |
| N1—C2 | 1.450 (6) | C5—H5 | 0.9300 |
| N1—H1A | 0.8900 | C6—C7 | 1.367 (7) |
| N1—H1B | 0.8900 | C6—H6 | 0.9300 |
| N1—H1C | 0.8900 | C7—H7 | 0.9300 |
| C2—C7 | 1.363 (7) | ||
| H1—O1—H2 | 108 (5) | N4—C3—C2 | 117.8 (5) |
| Br4—Hg1—Br1 | 120.99 (2) | N4—C3—H3 | 121.1 |
| Br4—Hg1—Br3 | 104.23 (2) | C2—C3—H3 | 121.1 |
| Br1—Hg1—Br3 | 109.78 (2) | C3—N4—C5 | 122.4 (5) |
| Br4—Hg1—Br2 | 103.42 (2) | C3—N4—H4 | 118.8 |
| Br1—Hg1—Br2 | 107.40 (2) | C5—N4—H4 | 118.8 |
| Br3—Hg1—Br2 | 110.73 (2) | N4—C5—C6 | 119.7 (5) |
| C2—N1—H1A | 109.5 | N4—C5—H5 | 120.2 |
| C2—N1—H1B | 109.5 | C6—C5—H5 | 120.2 |
| H1A—N1—H1B | 109.5 | C5—C6—C7 | 119.3 (5) |
| C2—N1—H1C | 109.5 | C5—C6—H6 | 120.4 |
| H1A—N1—H1C | 109.5 | C7—C6—H6 | 120.4 |
| H1B—N1—H1C | 109.5 | C2—C7—C6 | 119.2 (5) |
| C7—C2—C3 | 121.6 (5) | C2—C7—H7 | 120.4 |
| C7—C2—N1 | 119.7 (5) | C6—C7—H7 | 120.4 |
| C3—C2—N1 | 118.7 (5) | ||
| C7—C2—C3—N4 | −0.2 (8) | N4—C5—C6—C7 | −1.3 (9) |
| N1—C2—C3—N4 | 178.8 (5) | C3—C2—C7—C6 | 0.3 (8) |
| C2—C3—N4—C5 | −0.7 (8) | N1—C2—C7—C6 | −178.7 (5) |
| C3—N4—C5—C6 | 1.4 (9) | C5—C6—C7—C2 | 0.4 (8) |
| H··· | ||||
| O1—H1···Br2i | 0.89 (6) | 2.98 (6) | 3.564 (5) | 125 (5) |
| O1—H2···Br3 | 0.89 (6) | 2.65 (3) | 3.513 (5) | 162 (7) |
| N1—H1A···O1ii | 0.89 | 1.80 | 2.686 (7) | 174 |
| N1—H1B···Br4i | 0.89 | 2.79 | 3.442 (5) | 132 |
| N1—H1B···Br2iii | 0.89 | 2.84 | 3.535 (5) | 136 |
| N1—H1C···Br3i | 0.89 | 2.63 | 3.436 (5) | 152 |
| N4—H4···Br1iv | 0.86 | 2.73 | 3.419 (5) | 138 |
| Hg1—Br4 | 2.5818 (7) |
| Hg1—Br1 | 2.5875 (6) |
| Hg1—Br3 | 2.6216 (7) |
| Hg1—Br2 | 2.6309 (7) |
| Br4—Hg1—Br1 | 120.99 (2) |
| Br4—Hg1—Br3 | 104.23 (2) |
| Br1—Hg1—Br3 | 109.78 (2) |
| Br4—Hg1—Br2 | 103.42 (2) |
| Br1—Hg1—Br2 | 107.40 (2) |
| Br3—Hg1—Br2 | 110.73 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯Br2i | 0.89 (6) | 2.98 (6) | 3.564 (5) | 125 (5) |
| O1—H2⋯Br3 | 0.89 (6) | 2.65 (3) | 3.513 (5) | 162 (7) |
| N1—H1 | 0.89 | 1.80 | 2.686 (7) | 174 |
| N1—H1 | 0.89 | 2.79 | 3.442 (5) | 132 |
| N1—H1 | 0.89 | 2.84 | 3.535 (5) | 136 |
| N1—H1 | 0.89 | 2.63 | 3.436 (5) | 152 |
| N4—H4⋯Br1iv | 0.86 | 2.73 | 3.419 (5) | 138 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .