Literature DB >> 21202420

(2S)-2-(3-Oxo-1,4-dioxaspiro-[4.5]decan-2-yl)ethanoic acid.

Yow-Fu Tsai1, Yu-Ting Su, Chia-Her Lin.   

Abstract

The title compound, C(10)H(14)O(5), is an inter-mediate in our study of the asymmetric synthesis of α-hydroxy-alkanoic acids. The structure consists of 1,4-dioxaspiro[4,5]decane skeleton formed when the cyclohexylidene group binds to both of the hydroxyl groups of carboxylic groups of the starting malic acid. The six-membered ring adopts a chair conformation.

Entities:  

Year:  2008        PMID: 21202420      PMCID: PMC2961159          DOI: 10.1107/S160053680801146X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Coppola & Schuster (1997 ▶); Díez et al. (2001 ▶); Dixon et al. (2005 ▶); Hanessian et al. (1993 ▶); Heimgartner & Obrecht (1990 ▶); Horgen et al. (2000 ▶); Liang et al. (2000 ▶); Sitachitta et al. (2000 ▶); Sugiyama et al. (1990 ▶).

Experimental

Crystal data

C10H14O5 M = 214.21 Orthorhombic, a = 6.7098 (6) Å b = 10.3463 (8) Å c = 15.3175 (13) Å V = 1063.37 (15) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 295 (2) K 0.50 × 0.45 × 0.35 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scanSADABS; Bruker, 2004 ▶) T min = 0.948, T max = 0.963 7861 measured reflections 2206 independent reflections 1814 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.123 S = 1.05 2206 reflections 138 parameters H-atom parameters constrained Δρmax = 0.31 e Å−3 Δρmin = −0.17 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2; data reduction: SAINT (Bruker, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680801146X/wk2081sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680801146X/wk2081Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H14O5F000 = 456
Mr = 214.21Dx = 1.338 Mg m3
Orthorhombic, P212121Mo Kα radiation λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 3702 reflections
a = 6.7098 (6) Åθ = 2.4–31.6º
b = 10.3463 (8) ŵ = 0.11 mm1
c = 15.3175 (13) ÅT = 295 (2) K
V = 1063.37 (15) Å3Tabular, colourless
Z = 40.50 × 0.45 × 0.35 mm
Bruker Kappa APEXII CCD diffractometer2206 independent reflections
Radiation source: fine-focus sealed tube1814 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.022
T = 295(2) Kθmax = 33.3º
ω scansθmin = 2.4º
Absorption correction: multi-scan(SADABS; Bruker, 2004h = −10→8
Tmin = 0.948, Tmax = 0.963k = −15→9
7861 measured reflectionsl = −13→22
Refinement on F2Hydrogen site location: difference Fourier map
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.041  w = 1/[σ2(Fo2) + (0.0907P)2 + 0.0732P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.123(Δ/σ)max < 0.001
S = 1.05Δρmax = 0.31 e Å3
2206 reflectionsΔρmin = −0.17 e Å3
138 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.077 (9)
Secondary atom site location: difference Fourier map
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.7046 (2)0.66387 (12)0.06930 (8)0.0516 (3)
O20.4717 (2)0.51238 (14)0.10628 (8)0.0584 (4)
O30.2465 (2)0.28916 (12)0.00641 (11)0.0613 (4)
O4−0.0034 (2)0.40271 (14)−0.04693 (12)0.0647 (4)
H4A−0.06200.3336−0.04140.097*
O50.6684 (3)0.66532 (14)−0.07558 (9)0.0614 (4)
C10.6310 (2)0.61950 (15)−0.00602 (11)0.0438 (3)
C20.4985 (3)0.50524 (14)0.01414 (10)0.0406 (3)
H2A0.56620.4245−0.00150.049*
C30.2983 (3)0.51228 (15)−0.03022 (12)0.0454 (3)
H3A0.22200.5827−0.00510.055*
H3B0.31760.5309−0.09170.055*
C40.1827 (2)0.38946 (15)−0.02119 (10)0.0393 (3)
C50.6327 (3)0.58484 (16)0.14185 (11)0.0461 (4)
C60.5544 (4)0.6724 (2)0.21270 (13)0.0615 (5)
H6A0.48750.62090.25680.074*
H6B0.45770.73170.18800.074*
C70.7215 (5)0.7482 (2)0.25453 (14)0.0702 (7)
H7A0.77600.80830.21220.084*
H7B0.66870.79810.30290.084*
C80.8859 (4)0.6613 (2)0.28737 (14)0.0686 (6)
H8A0.83470.60640.33360.082*
H8B0.99250.71360.31140.082*
C90.9671 (3)0.5778 (2)0.21429 (14)0.0643 (5)
H9A1.02890.63220.17040.077*
H9B1.06810.52000.23720.077*
C100.8011 (3)0.49950 (18)0.17303 (13)0.0547 (4)
H10A0.85400.45110.12400.066*
H10B0.75020.43810.21540.066*
U11U22U33U12U13U23
O10.0599 (8)0.0417 (6)0.0531 (6)−0.0192 (6)−0.0063 (6)0.0093 (5)
O20.0631 (8)0.0668 (8)0.0454 (6)−0.0280 (7)−0.0004 (6)0.0098 (6)
O30.0445 (6)0.0356 (5)0.1039 (11)−0.0022 (5)−0.0091 (7)0.0121 (7)
O40.0425 (6)0.0513 (7)0.1003 (11)−0.0049 (6)−0.0158 (7)0.0192 (7)
O50.0622 (8)0.0654 (9)0.0565 (7)−0.0148 (7)0.0016 (6)0.0219 (7)
C10.0436 (7)0.0370 (6)0.0509 (8)−0.0079 (6)0.0021 (7)0.0086 (6)
C20.0434 (7)0.0330 (6)0.0455 (7)−0.0058 (6)−0.0007 (6)0.0048 (6)
C30.0436 (7)0.0360 (7)0.0568 (8)−0.0043 (6)−0.0036 (7)0.0096 (6)
C40.0376 (6)0.0365 (6)0.0440 (7)−0.0006 (6)−0.0002 (6)0.0009 (5)
C50.0516 (9)0.0420 (7)0.0448 (7)−0.0098 (7)−0.0003 (7)0.0040 (6)
C60.0602 (11)0.0677 (12)0.0564 (10)0.0122 (10)−0.0036 (9)−0.0061 (9)
C70.0984 (19)0.0535 (11)0.0588 (11)0.0035 (11)−0.0118 (12)−0.0117 (9)
C80.0772 (15)0.0712 (13)0.0575 (10)−0.0108 (12)−0.0193 (10)−0.0002 (10)
C90.0513 (10)0.0734 (13)0.0683 (11)0.0032 (10)−0.0065 (9)0.0130 (11)
C100.0663 (11)0.0425 (8)0.0552 (8)0.0047 (9)0.0025 (9)0.0053 (7)
O1—C11.336 (2)C5—C101.511 (3)
O1—C51.4617 (19)C6—C71.511 (3)
O2—C51.423 (2)C6—H6A0.9700
O2—C21.425 (2)C6—H6B0.9700
O3—C41.199 (2)C7—C81.510 (4)
O4—C41.317 (2)C7—H7A0.9700
O4—H4A0.8200C7—H7B0.9700
O5—C11.193 (2)C8—C91.515 (3)
C1—C21.511 (2)C8—H8A0.9700
C2—C31.507 (2)C8—H8B0.9700
C2—H2A0.9800C9—C101.515 (3)
C3—C41.495 (2)C9—H9A0.9700
C3—H3A0.9700C9—H9B0.9700
C3—H3B0.9700C10—H10A0.9700
C5—C61.508 (3)C10—H10B0.9700
C1—O1—C5110.00 (12)C7—C6—H6A109.4
C5—O2—C2108.11 (13)C5—C6—H6B109.4
C4—O4—H4A109.5C7—C6—H6B109.4
O5—C1—O1123.82 (15)H6A—C6—H6B108.0
O5—C1—C2128.12 (16)C8—C7—C6111.94 (17)
O1—C1—C2108.05 (13)C8—C7—H7A109.2
O2—C2—C3109.37 (15)C6—C7—H7A109.2
O2—C2—C1103.66 (13)C8—C7—H7B109.2
C3—C2—C1113.23 (12)C6—C7—H7B109.2
O2—C2—H2A110.1H7A—C7—H7B107.9
C3—C2—H2A110.1C7—C8—C9110.88 (17)
C1—C2—H2A110.1C7—C8—H8A109.5
C4—C3—C2112.30 (13)C9—C8—H8A109.5
C4—C3—H3A109.1C7—C8—H8B109.5
C2—C3—H3A109.1C9—C8—H8B109.5
C4—C3—H3B109.1H8A—C8—H8B108.1
C2—C3—H3B109.1C10—C9—C8110.37 (19)
H3A—C3—H3B107.9C10—C9—H9A109.6
O3—C4—O4122.26 (15)C8—C9—H9A109.6
O3—C4—C3125.67 (15)C10—C9—H9B109.6
O4—C4—C3112.07 (14)C8—C9—H9B109.6
O2—C5—O1104.72 (12)H9A—C9—H9B108.1
O2—C5—C6109.10 (17)C5—C10—C9111.66 (15)
O1—C5—C6109.04 (14)C5—C10—H10A109.3
O2—C5—C10112.38 (15)C9—C10—H10A109.3
O1—C5—C10108.68 (15)C5—C10—H10B109.3
C6—C5—C10112.58 (15)C9—C10—H10B109.3
C5—C6—C7111.0 (2)H10A—C10—H10B107.9
C5—C6—H6A109.4
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