Literature DB >> 21202408

2-Phenyl-imidazo[1,2-a]pyridine-3-carbaldehyde.

Abderrahman Anaflous, Hanane Albay, Nour-Eddine Benchat, Brahim El Bali, Michal Dušek, Karla Fejfarová.   

Abstract

In the title compound, C(14)H(10)N(2)O, the dihedral angle between the imidazo[1,2-a]pyridine and phenyl rings is 28.61 (4)° The mol-ecules are connected into broad chains parallel to the a axis by weak C-H⋯O and C-H⋯N hydrogen bonds. The linking of the ribbons is provided by π-π stacking inter-actions between neighbouring pyridine rings, with a centroid-centroid distance of 3.7187 (7) Å.

Entities:  

Year:  2008        PMID: 21202408      PMCID: PMC2961188          DOI: 10.1107/S1600536808011306

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see Anaflous et al. (2008 ▶) and references therein. For related literature, see: Meth-Cohn & Stanforth (1991 ▶).

Experimental

Crystal data

C14H10N2O M = 222.2 Orthorhombic, a = 13.0640 (3) Å b = 7.4162 (2) Å c = 21.6698 (6) Å V = 2099.48 (9) Å3 Z = 8 Mo Kα radiation μ = 0.09 mm−1 T = 120 K 0.57 × 0.40 × 0.24 mm

Data collection

Oxford Diffraction Xcalibur2 diffractometer with Sapphire2 CCD detector Absorption correction: none 25795 measured reflections 2196 independent reflections 1305 reflections with I > 3σ(I) R int = 0.049

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.077 S = 1.04 2196 reflections 154 parameters H-atom parameters constrained Δρmax = 0.15 e Å−3 Δρmin = −0.16 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2006 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2006 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SIR2002 (Burla et al., 2003 ▶); program(s) used to refine structure: JANA2000 (Petříček et al., 2000 ▶); molecular graphics: DIAMOND (Brandenburg & Putz, 2005 ▶); software used to prepare material for publication: JANA2000. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808011306/bg2180sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808011306/bg2180Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H10N2OF000 = 928
Mr = 222.2Dx = 1.406 Mg m3
Orthorhombic, PbcaMo Kα radiation λ = 0.71069 Å
Hall symbol: -P 2ac 2abCell parameters from 8746 reflections
a = 13.0640 (3) Åθ = 2.7–26.5º
b = 7.4162 (2) ŵ = 0.09 mm1
c = 21.6698 (6) ÅT = 120 K
V = 2099.48 (9) Å3Prism, colourless
Z = 80.57 × 0.40 × 0.24 mm
Oxford Diffraction Xcalibur2 diffractometer with Sapphire2 CCD detector2196 independent reflections
Radiation source: X-ray tube1305 reflections with I > 3σ(I)
Monochromator: graphiteRint = 0.049
Detector resolution: 8.3438 pixels mm-1θmax = 26.6º
T = 120 Kθmin = 3.1º
Rotation method data acquisition using ω scansh = −16→16
Absorption correction: nonek = −9→9
25795 measured reflectionsl = −27→27
Refinement on F2H-atom parameters constrained
R[F2 > 2σ(F2)] = 0.031Weighting scheme based on measured s.u.'s w = 1/[σ2(I) + 0.0016I2]
wR(F2) = 0.077(Δ/σ)max = 0.007
S = 1.04Δρmax = 0.15 e Å3
2196 reflectionsΔρmin = −0.16 e Å3
154 parametersExtinction correction: none
36 constraints
Refinement. The refinement was carried out against all reflections. The conventional R-factor is always based on F. The goodness of fit as well as the weighted R-factor are based on F and F2 for refinement carried out on F and F2, respectively. The threshold expression is used only for calculating R-factors etc. and it is not relevant to the choice of reflections for refinement.All the H atoms were discernible in difference Fourier maps and could be refined to reasonable geometry. According to standard procedures for organic compounds the H atoms bonded to C atoms were constrained to ideal positions. The isotropic atomic displacement parameters of hydrogen atoms were evaluated as 1.2*Ueq of the parent atom.The program used for refinement, Jana2006, uses the weighting scheme based on the experimental expectations, see _refine_ls_weighting_details, that does not force S to be one. Therefore the values of S are usually larger than the ones from the SHELX program.
xyzUiso*/Ueq
N10.38579 (8)0.13099 (13)0.06669 (5)0.0227 (3)
N20.22707 (8)0.09004 (13)0.02784 (5)0.0204 (3)
O10.03531 (7)0.19646 (11)0.08623 (4)0.0297 (3)
C10.31590 (10)0.18666 (16)0.10870 (6)0.0208 (4)
C20.33161 (10)0.07295 (16)0.01765 (6)0.0207 (4)
C30.21543 (10)0.16659 (16)0.08658 (6)0.0204 (4)
C40.36597 (11)−0.00163 (16)−0.03801 (6)0.0235 (4)
C50.29491 (10)−0.05736 (17)−0.08037 (7)0.0243 (4)
C60.18958 (10)−0.03859 (17)−0.06861 (6)0.0247 (4)
C70.15617 (10)0.03543 (16)−0.01503 (6)0.0236 (4)
C80.35054 (10)0.25310 (16)0.16940 (6)0.0214 (4)
C90.29235 (10)0.23521 (17)0.22302 (7)0.0238 (4)
C100.32855 (11)0.30105 (17)0.27874 (7)0.0274 (5)
C110.42372 (11)0.38290 (17)0.28223 (6)0.0283 (5)
C120.48307 (11)0.39863 (17)0.22959 (6)0.0282 (4)
C130.44708 (10)0.33402 (16)0.17344 (6)0.0242 (4)
C140.11885 (10)0.22273 (16)0.11073 (7)0.0245 (4)
H40.437543−0.014444−0.0470380.0282*
H50.318903−0.109503−0.1182460.0292*
H60.139117−0.077351−0.0979540.0296*
H70.0841110.048834−0.0076450.0283*
H90.2267570.1770120.2215550.0286*
H100.2873570.2898670.3152330.0329*
H110.4484330.42850.3209180.0339*
H120.5492590.4544080.2320380.0339*
H130.4890680.3453380.1372920.0291*
H140.1086880.2870150.1486950.0294*
U11U22U33U12U13U23
N10.0207 (6)0.0225 (5)0.0249 (6)0.0004 (5)0.0004 (5)0.0017 (5)
N20.0196 (6)0.0177 (5)0.0239 (6)−0.0005 (5)−0.0001 (5)0.0031 (5)
O10.0200 (6)0.0315 (5)0.0376 (6)0.0000 (4)−0.0002 (5)0.0024 (5)
C10.0221 (7)0.0149 (7)0.0255 (8)0.0007 (6)0.0019 (6)0.0052 (6)
C20.0192 (7)0.0170 (6)0.0259 (8)−0.0002 (6)0.0015 (6)0.0051 (6)
C30.0211 (7)0.0179 (6)0.0223 (7)−0.0008 (6)0.0022 (6)0.0026 (6)
C40.0219 (8)0.0224 (7)0.0263 (8)−0.0005 (6)0.0024 (6)0.0027 (6)
C50.0281 (8)0.0201 (7)0.0248 (8)−0.0015 (6)0.0020 (6)0.0031 (6)
C60.0245 (8)0.0220 (7)0.0275 (8)−0.0044 (6)−0.0037 (6)0.0023 (6)
C70.0194 (8)0.0225 (7)0.0289 (8)−0.0025 (6)−0.0031 (6)0.0043 (6)
C80.0228 (8)0.0155 (6)0.0260 (8)0.0027 (6)−0.0010 (6)0.0032 (5)
C90.0216 (8)0.0212 (7)0.0288 (8)−0.0003 (6)−0.0001 (7)0.0034 (6)
C100.0313 (8)0.0267 (7)0.0242 (8)0.0049 (7)0.0017 (7)0.0034 (6)
C110.0330 (8)0.0255 (7)0.0263 (8)0.0053 (7)−0.0057 (7)−0.0006 (6)
C120.0266 (8)0.0242 (7)0.0339 (8)−0.0021 (6)−0.0043 (7)0.0013 (7)
C130.0243 (8)0.0222 (7)0.0263 (8)0.0009 (6)0.0007 (6)0.0032 (6)
C140.0262 (8)0.0201 (7)0.0271 (8)0.0008 (7)0.0032 (7)0.0041 (6)
N1—C11.3537 (16)C6—H60.9600
N1—C21.3475 (16)C7—H70.9600
N2—C21.3893 (16)C8—C91.3949 (19)
N2—C31.4020 (17)C8—C131.3994 (18)
N2—C71.3731 (17)C9—C101.386 (2)
O1—C141.2293 (16)C9—H90.9600
C1—C31.4052 (18)C10—C111.3857 (19)
C1—C81.4758 (18)C10—H100.9600
C2—C41.4008 (18)C11—C121.3840 (19)
C3—C141.4279 (18)C11—H110.9600
C4—C51.3693 (19)C12—C131.3897 (19)
C4—H40.9600C12—H120.9600
C5—C61.4063 (18)C13—H130.9600
C5—H50.9600C14—H140.9600
C6—C71.3564 (19)
C1—N1—C2105.87 (10)N2—C7—H7121.20
C2—N2—C3106.74 (10)C6—C7—H7120.02
C2—N2—C7121.92 (11)C1—C8—C9122.93 (12)
C3—N2—C7131.34 (11)C1—C8—C13118.38 (12)
N1—C1—C3111.62 (11)C9—C8—C13118.67 (12)
N1—C1—C8119.62 (11)C8—C9—C10120.43 (12)
C3—C1—C8128.74 (12)C8—C9—H9120.11
N1—C2—N2111.21 (11)C10—C9—H9119.46
N1—C2—C4129.56 (12)C9—C10—C11120.53 (13)
N2—C2—C4119.21 (11)C9—C10—H10119.74
N2—C3—C1104.54 (11)C11—C10—H10119.73
N2—C3—C14123.14 (12)C10—C11—C12119.65 (13)
C1—C3—C14132.02 (12)C10—C11—H11120.24
C2—C4—C5118.63 (12)C12—C11—H11120.11
C2—C4—H4121.78C11—C12—C13120.19 (12)
C5—C4—H4119.59C11—C12—H12119.70
C4—C5—C6120.80 (13)C13—C12—H12120.11
C4—C5—H5118.26C8—C13—C12120.50 (12)
C6—C5—H5120.94C8—C13—H13120.09
C5—C6—C7120.66 (12)C12—C13—H13119.40
C5—C6—H6121.49O1—C14—C3125.44 (13)
C7—C6—H6117.85O1—C14—H14109.03
N2—C7—C6118.78 (12)C3—C14—H14125.53
D—H···AD—HH···AD···AD—H···A
C4—H4···N1i0.962.503.4386 (18)165
C6—H6···O1ii0.962.463.1856 (16)133
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C4—H4⋯N1i0.962.503.4386 (18)165
C6—H6⋯O1ii0.962.463.1856 (16)133

Symmetry codes: (i) ; (ii) .

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-04-26
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