| Literature DB >> 21202354 |
Mujahid Hussain Bukhari, Hamid Latif Siddiqui, M Nawaz Tahir, Muhammad Ashraf Chaudhary, Amjid Iqbal.
Abstract
In the mol-ecule of the title compound, C(13)H(10)ClNO, the benzene and pyrrole rings are oriented at a dihedral angle of 7.37 (12)°. In the crystal structure, inter-molecular N-H⋯O hydrogen bonds link the mol-ecules into centrosymmetric R(2) (2)(10) dimers. There are C-H⋯π inter-actions between benzene and pyrrole rings and a benzene C-H group. A weak π-π inter-action between the pyrrole rings [centroid-centroid distance 3.8515 (11) Å] further stabilizes the structure. There is also a π inter-action between the pyrrole ring and the carbonyl group, with a carbon-centroid distance of 3.4825 (18) Å.Entities:
Year: 2008 PMID: 21202354 PMCID: PMC2961151 DOI: 10.1107/S1600536808010362
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H10ClNO | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2883 reflections |
| θ = 2.4–28.7º | |
| µ = 0.31 mm−1 | |
| β = 94.979 (3)º | Prismatic, light yellow |
| 0.30 × 0.22 × 0.20 mm | |
| Bruker KappaAPEXII CCD diffractometer | 3081 independent reflections |
| Radiation source: fine-focus sealed tube | 2180 reflections with |
| Monochromator: graphite | |
| Detector resolution: 7.30 pixels mm-1 | θmax = 29.1º |
| θmin = 1.6º | |
| ω scans | |
| Absorption correction: multi-scan(SADABS; Bruker, 2005) | |
| 13745 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| All H-atom parameters refined | |
| | |
| (Δ/σ)max < 0.001 | |
| 3081 reflections | Δρmax = 0.29 e Å−3 |
| 185 parameters | Δρmin = −0.30 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Cl | 0.47349 (5) | −0.30082 (12) | 0.06812 (4) | 0.0972 (3) | |
| O1 | 0.10949 (10) | 0.4232 (2) | 0.43283 (8) | 0.0672 (4) | |
| N1 | 0.05564 (11) | 0.2306 (3) | 0.58749 (10) | 0.0572 (4) | |
| C1 | 0.29765 (11) | 0.0517 (3) | 0.26744 (10) | 0.0464 (3) | |
| C2 | 0.34920 (13) | −0.1623 (3) | 0.28485 (11) | 0.0525 (4) | |
| C3 | 0.40411 (13) | −0.2692 (3) | 0.22394 (12) | 0.0566 (4) | |
| C4 | 0.40726 (13) | −0.1631 (3) | 0.14559 (11) | 0.0563 (4) | |
| C5 | 0.35867 (14) | 0.0498 (3) | 0.12645 (11) | 0.0588 (4) | |
| C6 | 0.30445 (13) | 0.1551 (3) | 0.18805 (11) | 0.0537 (4) | |
| C7 | 0.23600 (12) | 0.1706 (3) | 0.32855 (10) | 0.0503 (4) | |
| C8 | 0.20870 (13) | 0.0873 (3) | 0.40137 (11) | 0.0548 (4) | |
| C9 | 0.14204 (12) | 0.2253 (3) | 0.45499 (11) | 0.0522 (4) | |
| C10 | 0.11764 (11) | 0.1179 (3) | 0.53393 (10) | 0.0501 (4) | |
| C11 | 0.14707 (13) | −0.0945 (3) | 0.57282 (11) | 0.0566 (4) | |
| C12 | 0.10275 (15) | −0.1076 (4) | 0.65000 (13) | 0.0659 (5) | |
| C13 | 0.04627 (14) | 0.0958 (4) | 0.65667 (12) | 0.0668 (5) | |
| H2 | 0.3481 (14) | −0.236 (3) | 0.3387 (13) | 0.066 (5)* | |
| H3 | 0.4387 (13) | −0.413 (3) | 0.2358 (11) | 0.062 (5)* | |
| H6 | 0.2713 (14) | 0.300 (4) | 0.1763 (12) | 0.063 (5)* | |
| H5 | 0.3607 (15) | 0.124 (4) | 0.0702 (14) | 0.075 (6)* | |
| H7 | 0.2116 (14) | 0.324 (4) | 0.3102 (12) | 0.067 (5)* | |
| H8 | 0.2289 (15) | −0.069 (4) | 0.4203 (13) | 0.076 (6)* | |
| H1 | 0.0220 (17) | 0.353 (4) | 0.5749 (14) | 0.073 (6)* | |
| H11 | 0.1896 (14) | −0.211 (3) | 0.5521 (12) | 0.063 (5)* | |
| H12 | 0.1118 (15) | −0.226 (4) | 0.6931 (14) | 0.075 (6)* | |
| H13 | 0.0089 (17) | 0.150 (4) | 0.7011 (15) | 0.091 (7)* |
| Cl | 0.1189 (5) | 0.0979 (5) | 0.0810 (4) | 0.0298 (3) | 0.0442 (3) | −0.0182 (3) |
| O1 | 0.0738 (8) | 0.0584 (7) | 0.0716 (8) | 0.0223 (6) | 0.0185 (6) | −0.0044 (6) |
| N1 | 0.0521 (7) | 0.0644 (9) | 0.0560 (8) | 0.0095 (7) | 0.0107 (6) | −0.0144 (7) |
| C1 | 0.0443 (7) | 0.0442 (7) | 0.0509 (8) | 0.0037 (6) | 0.0063 (6) | −0.0076 (6) |
| C2 | 0.0576 (9) | 0.0474 (8) | 0.0535 (9) | 0.0092 (7) | 0.0107 (7) | 0.0012 (7) |
| C3 | 0.0576 (9) | 0.0457 (8) | 0.0676 (11) | 0.0115 (7) | 0.0123 (8) | −0.0056 (7) |
| C4 | 0.0568 (9) | 0.0561 (9) | 0.0578 (9) | 0.0044 (7) | 0.0144 (7) | −0.0152 (7) |
| C5 | 0.0653 (10) | 0.0612 (10) | 0.0512 (9) | 0.0050 (8) | 0.0120 (7) | −0.0006 (8) |
| C6 | 0.0584 (9) | 0.0467 (8) | 0.0567 (9) | 0.0107 (7) | 0.0083 (7) | 0.0008 (7) |
| C7 | 0.0500 (8) | 0.0475 (8) | 0.0536 (9) | 0.0098 (6) | 0.0062 (6) | −0.0073 (7) |
| C8 | 0.0558 (9) | 0.0531 (9) | 0.0565 (9) | 0.0132 (7) | 0.0113 (7) | −0.0078 (7) |
| C9 | 0.0481 (8) | 0.0550 (9) | 0.0537 (9) | 0.0078 (7) | 0.0062 (6) | −0.0136 (7) |
| C10 | 0.0439 (7) | 0.0546 (9) | 0.0518 (8) | 0.0040 (6) | 0.0048 (6) | −0.0162 (7) |
| C11 | 0.0531 (9) | 0.0556 (9) | 0.0614 (10) | 0.0012 (7) | 0.0072 (7) | −0.0107 (8) |
| C12 | 0.0647 (10) | 0.0701 (12) | 0.0638 (11) | −0.0064 (9) | 0.0113 (8) | −0.0008 (10) |
| C13 | 0.0576 (10) | 0.0844 (13) | 0.0604 (11) | −0.0042 (9) | 0.0163 (8) | −0.0137 (10) |
| Cl—C4 | 1.7339 (15) | C5—H5 | 0.98 (2) |
| O1—C9 | 1.232 (2) | C6—H6 | 0.94 (2) |
| N1—C13 | 1.338 (3) | C7—C8 | 1.312 (2) |
| N1—C10 | 1.3711 (19) | C7—H7 | 0.96 (2) |
| N1—H1 | 0.83 (2) | C8—C9 | 1.481 (2) |
| C1—C6 | 1.384 (2) | C8—H8 | 0.96 (2) |
| C1—C2 | 1.396 (2) | C9—C10 | 1.438 (2) |
| C1—C7 | 1.465 (2) | C10—C11 | 1.382 (2) |
| C2—C3 | 1.381 (2) | C11—C12 | 1.388 (3) |
| C2—H2 | 0.94 (2) | C11—H11 | 0.937 (19) |
| C3—C4 | 1.370 (3) | C12—C13 | 1.371 (3) |
| C3—H3 | 0.938 (18) | C12—H12 | 0.95 (2) |
| C4—C5 | 1.377 (2) | C13—H13 | 0.94 (2) |
| C5—C6 | 1.380 (2) | ||
| C13—N1—C10 | 109.55 (16) | C8—C7—C1 | 127.72 (15) |
| C13—N1—H1 | 125.3 (15) | C8—C7—H7 | 118.5 (12) |
| C10—N1—H1 | 124.5 (15) | C1—C7—H7 | 113.7 (12) |
| C6—C1—C2 | 118.16 (14) | C7—C8—C9 | 121.58 (16) |
| C6—C1—C7 | 118.54 (14) | C7—C8—H8 | 120.7 (12) |
| C2—C1—C7 | 123.29 (15) | C9—C8—H8 | 117.7 (12) |
| C3—C2—C1 | 120.73 (16) | O1—C9—C10 | 121.80 (14) |
| C3—C2—H2 | 118.7 (12) | O1—C9—C8 | 121.29 (16) |
| C1—C2—H2 | 120.6 (12) | C10—C9—C8 | 116.91 (14) |
| C4—C3—C2 | 119.22 (16) | N1—C10—C11 | 106.62 (15) |
| C4—C3—H3 | 120.2 (11) | N1—C10—C9 | 121.27 (15) |
| C2—C3—H3 | 120.5 (11) | C11—C10—C9 | 132.10 (14) |
| C3—C4—C5 | 121.75 (15) | C10—C11—C12 | 108.08 (16) |
| C3—C4—Cl | 119.27 (13) | C10—C11—H11 | 127.2 (12) |
| C5—C4—Cl | 118.98 (14) | C12—C11—H11 | 124.7 (12) |
| C4—C5—C6 | 118.40 (16) | C13—C12—C11 | 106.80 (18) |
| C4—C5—H5 | 121.3 (12) | C13—C12—H12 | 124.5 (13) |
| C6—C5—H5 | 120.3 (12) | C11—C12—H12 | 128.6 (13) |
| C5—C6—C1 | 121.72 (15) | N1—C13—C12 | 108.94 (17) |
| C5—C6—H6 | 119.6 (12) | N1—C13—H13 | 120.7 (15) |
| C1—C6—H6 | 118.7 (12) | C12—C13—H13 | 130.3 (15) |
| C6—C1—C2—C3 | −0.9 (2) | C7—C8—C9—O1 | 0.3 (3) |
| C7—C1—C2—C3 | 178.38 (16) | C7—C8—C9—C10 | −179.47 (15) |
| C1—C2—C3—C4 | −0.3 (3) | C13—N1—C10—C11 | −0.09 (19) |
| C2—C3—C4—C5 | 1.2 (3) | C13—N1—C10—C9 | −179.06 (15) |
| C2—C3—C4—Cl | −178.39 (13) | O1—C9—C10—N1 | 0.9 (2) |
| C3—C4—C5—C6 | −1.0 (3) | C8—C9—C10—N1 | −179.32 (14) |
| Cl—C4—C5—C6 | 178.67 (14) | O1—C9—C10—C11 | −177.75 (17) |
| C4—C5—C6—C1 | −0.3 (3) | C8—C9—C10—C11 | 2.0 (3) |
| C2—C1—C6—C5 | 1.2 (3) | N1—C10—C11—C12 | −0.27 (19) |
| C7—C1—C6—C5 | −178.12 (15) | C9—C10—C11—C12 | 178.54 (17) |
| C6—C1—C7—C8 | 170.00 (17) | C10—C11—C12—C13 | 0.5 (2) |
| C2—C1—C7—C8 | −9.3 (3) | C10—N1—C13—C12 | 0.4 (2) |
| C1—C7—C8—C9 | −177.33 (15) | C11—C12—C13—N1 | −0.6 (2) |
| H··· | ||||
| N1—H1···O1i | 0.83 (2) | 2.12 (2) | 2.902 (2) | 156 (2) |
| C3—H3···CgAii | 0.938 (18) | 2.897 (17) | 3.6339 (19) | 136.4 (13) |
| C6—H6···CgBiii | 0.94 (2) | 2.651 (19) | 3.4017 (19) | 137.8 (16) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O1i | 0.83 (2) | 2.12 (2) | 2.902 (2) | 156 (2) |
| C3—H3⋯ | 0.938 (18) | 2.897 (17) | 3.6339 (19) | 136.4 (13) |
| C6—H6⋯ | 0.94 (2) | 2.651 (19) | 3.4017 (19) | 137.8 (16) |
Symmetry codes: (i) ; (ii) ; (iii) . CgA and CgB are the centroids of the C1–C6 and N1/C10–C13 rings, respectively.