| Literature DB >> 21202173 |
Antonio Rodríguez-Diéguez, Hakima Aouryaghal, A J Mota, Enrique Colacio.
Abstract
In the title compound, [Mn(2)(C(2)O(4))(C(5)H(3)N(2)O(2))(2)(H(2)O)(2)](n), the Mn(II) atom exhibits a distorted octa-hedral coordination geometry, with the centrosymmetric oxalate anion and the monoanionic pyrimidine-2-carboxyl-ate ligands generating a two-dimensional honeycomb network with a (6,3)-topology.Entities:
Year: 2008 PMID: 21202173 PMCID: PMC2961100 DOI: 10.1107/S1600536808002687
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Mn2(C2O4)(C5H3N2O2)2(H2O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 3384 reflections |
| θ = 2.8–28.9º | |
| µ = 1.64 mm−1 | |
| β = 102.4220 (10)º | Prismatic, yellow |
| 0.22 × 0.21 × 0.20 mm | |
| Bruker SMART APEX CCD area-detector diffractometer | 1389 reflections with |
| Monochromator: graphite | |
| θmax = 25.5º | |
| φ and ω scans | θmin = 2.8º |
| Absorption correction: multi-scan(SADABS; Sheldrick, 2004) | |
| 5847 measured reflections | |
| 1495 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max < 0.001 | |
| 1495 reflections | Δρmax = 0.41 e Å−3 |
| 127 parameters | Δρmin = −0.21 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Mn1 | 0.22294 (4) | 0.67224 (3) | 0.51301 (3) | 0.01810 (12) | |
| N1 | 0.2376 (2) | 0.87496 (16) | 0.49706 (17) | 0.0170 (4) | |
| C2 | 0.1555 (3) | 0.94939 (19) | 0.3937 (2) | 0.0224 (5) | |
| H2 | 0.0850 | 0.9174 | 0.3117 | 0.027* | |
| C3 | 0.1735 (3) | 1.07187 (19) | 0.4065 (2) | 0.0230 (5) | |
| H3 | 0.1164 | 1.1230 | 0.3353 | 0.028* | |
| C4 | 0.2805 (3) | 1.1150 (2) | 0.5301 (2) | 0.0229 (5) | |
| H4 | 0.2929 | 1.1972 | 0.5428 | 0.027* | |
| N5 | 0.3670 (2) | 1.04205 (16) | 0.63259 (18) | 0.0196 (4) | |
| C6 | 0.3405 (3) | 0.92559 (18) | 0.6111 (2) | 0.0166 (4) | |
| C7 | 0.4354 (3) | 0.83993 (18) | 0.7255 (2) | 0.0182 (4) | |
| O8 | 0.3827 (2) | 0.73395 (13) | 0.71406 (16) | 0.0251 (4) | |
| O9 | 0.5576 (2) | 0.88282 (13) | 0.81900 (15) | 0.0224 (3) | |
| O1B | 0.4755 (2) | 0.64691 (13) | 0.43885 (16) | 0.0230 (3) | |
| O2B | 0.30121 (19) | 0.48353 (13) | 0.56335 (16) | 0.0217 (3) | |
| C3B | 0.5504 (3) | 0.54766 (18) | 0.4641 (2) | 0.0185 (4) | |
| O1W | −0.0119 (2) | 0.64879 (13) | 0.60530 (15) | 0.0219 (3) | |
| H2WB | −0.0848 | 0.6091 | 0.5523 | 0.026* | |
| H1WA | 0.0167 | 0.6192 | 0.6778 | 0.026* |
| Mn1 | 0.01820 (19) | 0.01263 (18) | 0.01991 (19) | 0.00050 (12) | −0.00384 (13) | −0.00014 (12) |
| N1 | 0.0170 (9) | 0.0150 (9) | 0.0171 (9) | 0.0001 (7) | −0.0008 (7) | −0.0001 (6) |
| C2 | 0.0235 (11) | 0.0219 (11) | 0.0194 (10) | −0.0003 (9) | −0.0009 (9) | 0.0000 (9) |
| C3 | 0.0250 (11) | 0.0198 (11) | 0.0229 (11) | 0.0005 (9) | 0.0024 (9) | 0.0033 (9) |
| C4 | 0.0259 (11) | 0.0165 (11) | 0.0257 (11) | −0.0010 (9) | 0.0044 (9) | 0.0013 (9) |
| N5 | 0.0219 (9) | 0.0166 (9) | 0.0187 (9) | −0.0014 (7) | 0.0007 (7) | −0.0005 (7) |
| C6 | 0.0162 (10) | 0.0162 (10) | 0.0170 (10) | 0.0002 (8) | 0.0026 (8) | −0.0002 (8) |
| C7 | 0.0185 (10) | 0.0184 (11) | 0.0167 (10) | 0.0026 (8) | 0.0016 (8) | −0.0003 (8) |
| O8 | 0.0297 (9) | 0.0157 (8) | 0.0241 (8) | −0.0014 (6) | −0.0074 (7) | 0.0027 (6) |
| O9 | 0.0222 (8) | 0.0211 (8) | 0.0195 (8) | −0.0023 (6) | −0.0054 (6) | 0.0001 (6) |
| O1B | 0.0223 (8) | 0.0136 (7) | 0.0316 (8) | 0.0020 (6) | 0.0028 (7) | 0.0050 (6) |
| O2B | 0.0188 (7) | 0.0163 (7) | 0.0282 (8) | 0.0010 (6) | 0.0009 (6) | 0.0016 (6) |
| C3B | 0.0172 (10) | 0.0151 (10) | 0.0191 (10) | −0.0009 (8) | −0.0055 (8) | −0.0017 (8) |
| O1W | 0.0235 (8) | 0.0196 (8) | 0.0193 (7) | −0.0002 (6) | −0.0028 (6) | 0.0028 (6) |
| Mn1—O9i | 2.1175 (14) | C4—H4 | 0.9300 |
| Mn1—O1W | 2.1677 (15) | N5—C6 | 1.329 (3) |
| Mn1—O8 | 2.1771 (15) | C6—C7 | 1.526 (3) |
| Mn1—O1B | 2.1958 (16) | C7—O9 | 1.244 (3) |
| Mn1—O2B | 2.2196 (15) | C7—O8 | 1.248 (3) |
| Mn1—N1 | 2.2790 (18) | O9—Mn1ii | 2.1175 (14) |
| N1—C6 | 1.336 (3) | O1B—C3B | 1.247 (2) |
| N1—C2 | 1.349 (3) | O2B—C3Biii | 1.255 (3) |
| C2—C3 | 1.381 (3) | C3B—O2Biii | 1.255 (3) |
| C2—H2 | 0.9300 | C3B—C3Biii | 1.560 (4) |
| C3—C4 | 1.383 (3) | O1W—H2WB | 0.8027 |
| C3—H3 | 0.9300 | O1W—H1WA | 0.7669 |
| C4—N5 | 1.344 (3) | ||
| O9i—Mn1—O1W | 87.50 (6) | C2—C3—H3 | 121.5 |
| O9i—Mn1—O8 | 177.38 (6) | C4—C3—H3 | 121.5 |
| O1W—Mn1—O8 | 90.61 (6) | N5—C4—C3 | 122.1 (2) |
| O9i—Mn1—O1B | 93.21 (6) | N5—C4—H4 | 118.9 |
| O1W—Mn1—O1B | 164.73 (6) | C3—C4—H4 | 118.9 |
| O8—Mn1—O1B | 89.08 (6) | C6—N5—C4 | 116.55 (18) |
| O9i—Mn1—O2B | 89.85 (6) | N5—C6—N1 | 126.02 (19) |
| O1W—Mn1—O2B | 89.76 (6) | N5—C6—C7 | 118.09 (18) |
| O8—Mn1—O2B | 91.96 (5) | N1—C6—C7 | 115.90 (18) |
| O1B—Mn1—O2B | 74.99 (5) | O9—C7—O8 | 127.13 (19) |
| O9i—Mn1—N1 | 104.89 (6) | O9—C7—C6 | 116.64 (18) |
| O1W—Mn1—N1 | 101.81 (6) | O8—C7—C6 | 116.22 (18) |
| O8—Mn1—N1 | 73.72 (6) | C7—O8—Mn1 | 119.06 (13) |
| O1B—Mn1—N1 | 92.76 (6) | C7—O9—Mn1ii | 137.83 (14) |
| O2B—Mn1—N1 | 161.49 (6) | C3B—O1B—Mn1 | 116.05 (14) |
| C6—N1—C2 | 116.64 (18) | C3Biii—O2B—Mn1 | 115.15 (13) |
| C6—N1—Mn1 | 113.21 (13) | O1B—C3B—O2Biii | 126.4 (2) |
| C2—N1—Mn1 | 130.12 (14) | O1B—C3B—C3Biii | 117.0 (2) |
| N1—C2—C3 | 121.7 (2) | O2Biii—C3B—C3Biii | 116.6 (2) |
| N1—C2—H2 | 119.2 | Mn1—O1W—H2WB | 108.0 |
| C3—C2—H2 | 119.2 | Mn1—O1W—H1WA | 109.9 |
| C2—C3—C4 | 117.0 (2) | H2WB—O1W—H1WA | 111.7 |
| H··· | ||||
| O1W—H2WB···O2Biv | 0.80 | 2.05 | 2.847 (2) | 170 |
| O1W—H1WA···N5v | 0.77 | 2.05 | 2.815 (2) | 171 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1 | 0.80 | 2.05 | 2.847 (2) | 170 |
| O1 | 0.77 | 2.05 | 2.815 (2) | 171 |
Symmetry codes: (i) ; (ii) .