Literature DB >> 21202151

6-Hydr-oxy-7-isopropyl-1,1,4a-trimethyl-2,3,4,4a,10,10a-hexa-hydro-phenanthren-9(1H)-one.

Nezha Rajouani, My Youssef Ait Itto, Ahmed Benharref, Aziz Auhmani, Jean-Claude Daran.   

Abstract

The title compound, C(20)H(28)O(2), commonly named Sugiol, is a natural oxygenated diterpene that we have isolated for the first time from a hexane extract of the fruits of Juniperus Oxycedrus L. Its X-ray crystal structure determination confirms an abietane skeleton which was predicted by spectroscopic analysis, mainly by (1)H and (13)C NMR. The cyclo-hexane ring adopts a flattened chair conformation, while the cyclo-hexene ring adopts an envelope conformation. The mol-ecules are linked through O-H⋯O hydrogen bonds to form a zigzag chain extending parallel to the c axis.

Entities:  

Year:  2008        PMID: 21202151      PMCID: PMC2960938          DOI: 10.1107/S1600536808007769

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Bai-Ping & Isao (1991 ▶); Bouhlal et al. (1988 ▶); Cremer & Pople (1975 ▶); Iwamato et al. (2003 ▶); Politi et al. (2003 ▶); Ulubelen et al. (1997 ▶).

Experimental

Crystal data

C20H28O2 M = 300.42 Orthorhombic, a = 9.6060 (4) Å b = 12.6617 (6) Å c = 14.0920 (7) Å V = 1713.99 (14) Å3 Z = 4 Mo Kα radiation μ = 0.07 mm−1 T = 180 (2) K 0.31 × 0.16 × 0.07 mm

Data collection

Oxford Diffraction Xcalibur diffractometer Absorption correction: none 13398 measured reflections 2003 independent reflections 1212 reflections with I > 2σ(I) R int = 0.068

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.154 S = 1.05 2003 reflections 205 parameters H-atom parameters constrained Δρmax = 0.36 e Å−3 Δρmin = −0.38 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2007 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2007 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶), ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2003 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808007769/pk2088sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808007769/pk2088Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H28O2F000 = 656
Mr = 300.42Dx = 1.164 Mg m3
Orthorhombic, P212121Mo Kα radiation λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 3571 reflections
a = 9.6060 (4) Åθ = 2.7–32.1º
b = 12.6617 (6) ŵ = 0.07 mm1
c = 14.0920 (7) ÅT = 180 (2) K
V = 1713.99 (14) Å3Flattened box, colorless
Z = 40.31 × 0.16 × 0.07 mm
Oxford Diffraction Xcalibur diffractometer2003 independent reflections
Radiation source: fine-focus sealed tube1212 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.068
Detector resolution: 8.2632 pixels mm-1θmax = 26.4º
T = 180(2) Kθmin = 2.7º
ω and φ scansh = −12→12
Absorption correction: nonek = −15→15
13398 measured reflectionsl = −14→17
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.046H-atom parameters constrained
wR(F2) = 0.154  w = 1/[σ2(Fo2) + (0.0842P)2] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
2003 reflectionsΔρmax = 0.36 e Å3
205 parametersΔρmin = −0.38 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.0789 (4)0.8588 (3)0.0839 (3)0.0291 (10)
C20.1754 (4)0.9176 (3)0.1515 (3)0.0339 (11)
H2A0.26740.92110.12340.041*
H2B0.14180.98940.15880.041*
C30.1869 (5)0.8673 (3)0.2486 (3)0.0366 (11)
H3A0.09660.86810.27940.044*
H3B0.25110.90770.28740.044*
C40.2389 (4)0.7525 (3)0.2400 (3)0.0296 (10)
H4A0.24300.72150.30290.036*
H4B0.33270.75310.21450.036*
C4A0.1464 (4)0.6828 (3)0.1762 (3)0.0217 (9)
C4B0.2182 (4)0.5776 (3)0.1555 (3)0.0202 (9)
C50.3090 (4)0.5314 (3)0.2203 (3)0.0252 (9)
H50.32860.56610.27680.030*
C60.3699 (4)0.4356 (3)0.2023 (3)0.0255 (9)
C70.3444 (4)0.3792 (3)0.1186 (3)0.0296 (10)
C80.2533 (4)0.4252 (3)0.0564 (3)0.0244 (10)
H80.23350.38980.00020.029*
C8A0.1892 (4)0.5211 (3)0.0724 (3)0.0219 (9)
C90.0961 (4)0.5626 (3)0.0010 (3)0.0220 (9)
C100.0395 (4)0.6713 (3)0.0137 (3)0.0307 (10)
H10A−0.05450.66630.03840.037*
H10B0.03440.7054−0.04790.037*
C10A0.1257 (4)0.7408 (3)0.0804 (3)0.0227 (9)
H10C0.21860.74260.05180.027*
C110.0945 (5)0.9073 (3)−0.0143 (3)0.0455 (13)
H11A0.08470.9826−0.00990.068*
H11B0.02390.8795−0.05560.068*
H11C0.18470.8905−0.03930.068*
C12−0.0741 (4)0.8754 (3)0.1138 (3)0.0397 (12)
H12A−0.10130.94680.10060.060*
H12B−0.08360.86180.18050.060*
H12C−0.13280.82780.07900.060*
C130.0112 (4)0.6551 (3)0.2292 (3)0.0333 (11)
H13A−0.04940.61620.18790.050*
H13B−0.03430.71900.24900.050*
H13C0.03280.61300.28390.050*
C140.4133 (5)0.2730 (3)0.1025 (3)0.0322 (11)
H140.51000.27920.12400.039*
C150.4171 (6)0.2384 (4)0.0019 (4)0.0672 (18)
H15A0.32390.2261−0.02010.101*
H15B0.47010.1743−0.00320.101*
H15C0.45980.2923−0.03620.101*
C160.3443 (6)0.1868 (4)0.1627 (4)0.0614 (16)
H16A0.25160.17440.13990.092*
H16B0.34060.20930.22770.092*
H16C0.39760.12290.15820.092*
O60.4598 (3)0.3917 (2)0.2654 (2)0.0353 (8)
H60.46410.42870.31310.053*
O90.0639 (3)0.5113 (2)−0.06942 (18)0.0304 (7)
U11U22U33U12U13U23
C10.033 (2)0.018 (2)0.036 (2)0.0086 (18)−0.001 (2)0.0033 (19)
C20.033 (2)0.021 (2)0.048 (3)0.0042 (19)0.000 (2)−0.002 (2)
C30.032 (2)0.029 (2)0.048 (3)0.001 (2)−0.008 (2)−0.014 (2)
C40.032 (2)0.027 (2)0.029 (2)0.0046 (19)−0.0046 (19)−0.0085 (19)
C4A0.022 (2)0.021 (2)0.022 (2)−0.0028 (16)−0.0010 (18)0.0000 (17)
C4B0.0183 (18)0.0196 (19)0.023 (2)−0.0009 (16)0.0041 (18)0.0026 (17)
C50.028 (2)0.025 (2)0.023 (2)−0.0008 (18)0.000 (2)−0.0038 (18)
C60.029 (2)0.028 (2)0.019 (2)0.0069 (19)0.0023 (18)0.0033 (19)
C70.032 (3)0.025 (2)0.032 (2)0.0043 (19)0.007 (2)0.002 (2)
C80.028 (2)0.023 (2)0.022 (2)0.0025 (19)−0.0002 (18)0.0010 (18)
C8A0.026 (2)0.0196 (19)0.020 (2)−0.0039 (17)−0.0026 (19)0.0021 (18)
C90.024 (2)0.021 (2)0.020 (2)−0.0005 (17)0.0018 (18)0.0018 (18)
C100.033 (2)0.032 (2)0.027 (2)0.0024 (19)−0.006 (2)−0.0011 (19)
C10A0.021 (2)0.024 (2)0.023 (2)0.0048 (16)−0.0008 (18)−0.0035 (18)
C110.059 (3)0.029 (3)0.049 (3)0.008 (2)0.001 (3)0.011 (2)
C120.035 (3)0.035 (3)0.048 (3)0.013 (2)−0.009 (2)−0.010 (2)
C130.030 (2)0.033 (2)0.037 (3)0.0033 (19)0.003 (2)0.003 (2)
C140.036 (3)0.025 (2)0.035 (2)0.010 (2)−0.002 (2)0.0025 (18)
C150.093 (5)0.065 (4)0.044 (3)0.045 (4)0.001 (3)−0.011 (3)
C160.067 (4)0.036 (3)0.080 (4)0.006 (3)0.017 (3)0.006 (3)
O60.0436 (18)0.0353 (17)0.0271 (17)0.0196 (15)−0.0073 (15)−0.0031 (14)
O90.0393 (17)0.0288 (15)0.0231 (15)0.0002 (14)−0.0061 (14)−0.0076 (13)
C1—C111.521 (6)C8A—C91.445 (5)
C1—C21.524 (6)C9—O91.226 (4)
C1—C121.543 (6)C9—C101.491 (5)
C1—C10A1.561 (5)C10—C10A1.530 (5)
C2—C31.514 (6)C10—H10A0.9700
C2—H2A0.9700C10—H10B0.9700
C2—H2B0.9700C10A—H10C0.9800
C3—C41.542 (5)C11—H11A0.9600
C3—H3A0.9700C11—H11B0.9600
C3—H3B0.9700C11—H11C0.9600
C4—C4A1.542 (5)C12—H12A0.9600
C4—H4A0.9700C12—H12B0.9600
C4—H4B0.9700C12—H12C0.9600
C4A—C4B1.528 (5)C13—H13A0.9600
C4A—C131.539 (5)C13—H13B0.9600
C4A—C10A1.550 (5)C13—H13C0.9600
C4B—C51.391 (5)C14—C151.485 (6)
C4B—C8A1.401 (5)C14—C161.532 (6)
C5—C61.370 (5)C14—H140.9800
C5—H50.9300C15—H15A0.9600
C6—O61.359 (4)C15—H15B0.9600
C6—C71.401 (5)C15—H15C0.9600
C7—C81.369 (5)C16—H16A0.9600
C7—C141.517 (5)C16—H16B0.9600
C8—C8A1.380 (5)C16—H16C0.9600
C8—H80.9300O6—H60.8200
C11—C1—C2108.1 (4)C8A—C9—C10118.6 (3)
C11—C1—C12106.7 (4)C9—C10—C10A114.0 (3)
C2—C1—C12110.0 (3)C9—C10—H10A108.7
C11—C1—C10A109.3 (3)C10A—C10—H10A108.7
C2—C1—C10A108.2 (3)C9—C10—H10B108.7
C12—C1—C10A114.4 (3)C10A—C10—H10B108.7
C3—C2—C1113.9 (3)H10A—C10—H10B107.6
C3—C2—H2A108.8C10—C10A—C4A109.4 (3)
C1—C2—H2A108.8C10—C10A—C1114.4 (3)
C3—C2—H2B108.8C4A—C10A—C1117.6 (3)
C1—C2—H2B108.8C10—C10A—H10C104.6
H2A—C2—H2B107.7C4A—C10A—H10C104.6
C2—C3—C4110.4 (3)C1—C10A—H10C104.6
C2—C3—H3A109.6C1—C11—H11A109.5
C4—C3—H3A109.6C1—C11—H11B109.5
C2—C3—H3B109.6H11A—C11—H11B109.5
C4—C3—H3B109.6C1—C11—H11C109.5
H3A—C3—H3B108.1H11A—C11—H11C109.5
C3—C4—C4A113.5 (3)H11B—C11—H11C109.5
C3—C4—H4A108.9C1—C12—H12A109.5
C4A—C4—H4A108.9C1—C12—H12B109.5
C3—C4—H4B108.9H12A—C12—H12B109.5
C4A—C4—H4B108.9C1—C12—H12C109.5
H4A—C4—H4B107.7H12A—C12—H12C109.5
C4B—C4A—C13106.0 (3)H12B—C12—H12C109.5
C4B—C4A—C4110.5 (3)C4A—C13—H13A109.5
C13—C4A—C4109.5 (3)C4A—C13—H13B109.5
C4B—C4A—C10A107.8 (3)H13A—C13—H13B109.5
C13—C4A—C10A115.0 (3)C4A—C13—H13C109.5
C4—C4A—C10A108.1 (3)H13A—C13—H13C109.5
C5—C4B—C8A117.3 (3)H13B—C13—H13C109.5
C5—C4B—C4A121.6 (3)C15—C14—C7114.6 (4)
C8A—C4B—C4A121.0 (3)C15—C14—C16109.2 (4)
C6—C5—C4B121.3 (4)C7—C14—C16111.0 (4)
C6—C5—H5119.4C15—C14—H14107.2
C4B—C5—H5119.4C7—C14—H14107.2
O6—C6—C5120.9 (4)C16—C14—H14107.2
O6—C6—C7117.0 (3)C14—C15—H15A109.5
C5—C6—C7122.2 (4)C14—C15—H15B109.5
C8—C7—C6115.8 (3)H15A—C15—H15B109.5
C8—C7—C14124.1 (4)C14—C15—H15C109.5
C6—C7—C14120.1 (4)H15A—C15—H15C109.5
C7—C8—C8A123.7 (4)H15B—C15—H15C109.5
C7—C8—H8118.2C14—C16—H16A109.5
C8A—C8—H8118.2C14—C16—H16B109.5
C8—C8A—C4B119.8 (4)H16A—C16—H16B109.5
C8—C8A—C9118.9 (3)C14—C16—H16C109.5
C4B—C8A—C9121.3 (3)H16A—C16—H16C109.5
O9—C9—C8A121.7 (3)H16B—C16—H16C109.5
O9—C9—C10119.6 (4)C6—O6—H6109.5
D—H···AD—HH···AD···AD—H···A
O6—H6···O9i0.821.842.642 (4)165
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O6—H6⋯O9i0.821.842.642 (4)165

Symmetry code: (i) .

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