Literature DB >> 21202142

2-(3-Oxo-1,3-dihydro-isobenzofuran-1-ylamino)benzoic acid.

Mustafa Odabaşoğlu, Orhan Büyükgüngör.   

Abstract

In the mol-ecule of the title compound, C(15)H(11)NO(4), the essentially planar phthalide group is oriented at a dihedral angle of 56.78 (5)° with respect to the substituted aromatic ring. An intra-molecular N-H⋯O hydrogen bond results in the formation of a non-planar six-membered ring, which adopts a nearly flattened-boat conformation. In the crystal structure, inter-molecular C-H⋯O, O-H⋯O and N-H⋯O hydrogen bonds link the mol-ecules, generating centrosymmetric R(2) (2)(8) and R(2) (2)(11) ring motifs and forming a three-dimensional network.

Entities:  

Year:  2008        PMID: 21202142      PMCID: PMC2960995          DOI: 10.1107/S160053680800754X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Aoki et al. (1973 ▶, 1974 ▶); Lacova (1973 ▶, 1974 ▶); Elderfield (1951 ▶); Bellasio (1974 ▶, 1975 ▶); Roy & Sarkar (2005 ▶); Kubota & Tatsuno (1971 ▶); Tsi & Tan (1997 ▶). For related structures, see: Büyükgüngör & Odabaşoğlu (2006 ▶); Odabaşoğlu & Büyükgüngör (2006 ▶; 2007 ▶). For ring puckering parameters, see: Cremer & Pople (1975 ▶). For ring motif details, see: Bernstein et al. (1995 ▶); Etter (1990 ▶).

Experimental

Crystal data

C15H11NO4 M = 269.25 Monoclinic, a = 7.8135 (6) Å b = 22.6205 (10) Å c = 7.0902 (5) Å β = 101.061 (5)° V = 1229.88 (14) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 296 K 0.55 × 0.36 × 0.18 mm

Data collection

Stoe IPDS II diffractometer Absorption correction: integration (X-RED32; Stoe & Cie, 2002 ▶) T min = 0.958, T max = 0.982 12715 measured reflections 2536 independent reflections 1958 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.093 S = 1.07 2536 reflections 225 parameters All H-atom parameters refined Δρmax = 0.16 e Å−3 Δρmin = −0.17 e Å−3 Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680800754X/hk2434sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680800754X/hk2434Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H11NO4F000 = 560
Mr = 269.25Dx = 1.454 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 12715 reflections
a = 7.8135 (6) Åθ = 1.8–27.3º
b = 22.6205 (10) ŵ = 0.11 mm1
c = 7.0902 (5) ÅT = 296 K
β = 101.061 (5)ºPrism, colorless
V = 1229.88 (14) Å30.55 × 0.36 × 0.18 mm
Z = 4
Stoe IPDSII diffractometer2536 independent reflections
Monochromator: plane graphite1958 reflections with I > 2σ(I)
Detector resolution: 6.67 pixels mm-1Rint = 0.034
T = 296 Kθmax = 26.5º
ω scan rotation methodθmin = 1.8º
Absorption correction: integration(X-RED32; Stoe & Cie, 2002)h = −9→9
Tmin = 0.958, Tmax = 0.982k = −28→28
12715 measured reflectionsl = −8→8
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.043All H-atom parameters refined
wR(F2) = 0.093  w = 1/[σ2(Fo2) + (0.0403P)2 + 0.2251P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max < 0.001
2536 reflectionsΔρmax = 0.16 e Å3
225 parametersΔρmin = −0.17 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.6576 (2)0.26649 (7)0.4899 (2)0.0402 (4)
C20.8303 (2)0.24430 (7)0.5812 (2)0.0367 (4)
C30.9781 (3)0.27532 (8)0.6650 (3)0.0457 (4)
C41.1272 (3)0.24364 (9)0.7337 (3)0.0518 (5)
C51.1279 (3)0.18248 (9)0.7191 (3)0.0511 (5)
C60.9805 (2)0.15141 (8)0.6356 (3)0.0460 (4)
C70.8308 (2)0.18333 (7)0.5662 (2)0.0354 (4)
C80.6571 (2)0.16362 (7)0.4548 (3)0.0364 (4)
C90.4218 (2)0.09230 (6)0.4534 (2)0.0332 (4)
C100.3436 (2)0.04653 (6)0.5436 (2)0.0321 (3)
C110.1982 (2)0.01723 (7)0.4399 (3)0.0396 (4)
C120.1264 (2)0.03208 (8)0.2541 (3)0.0458 (4)
C130.2021 (2)0.07689 (8)0.1666 (3)0.0435 (4)
C140.3465 (2)0.10673 (7)0.2628 (2)0.0389 (4)
C150.4117 (2)0.02788 (6)0.7427 (2)0.0334 (3)
N10.56924 (19)0.12145 (6)0.5475 (2)0.0387 (3)
O10.60404 (19)0.31643 (5)0.4713 (2)0.0563 (4)
O20.55684 (15)0.21973 (5)0.41990 (18)0.0437 (3)
O30.53512 (17)0.05196 (5)0.84778 (17)0.0457 (3)
O40.32808 (17)−0.01696 (5)0.80153 (19)0.0481 (3)
H10.596 (2)0.1184 (8)0.670 (3)0.046 (5)*
H30.975 (3)0.3188 (9)0.671 (3)0.058 (6)*
H41.229 (3)0.2630 (9)0.792 (3)0.060 (6)*
H4A0.383 (3)−0.0277 (11)0.931 (4)0.094 (9)*
H51.233 (3)0.1623 (8)0.764 (3)0.055 (6)*
H60.980 (3)0.1090 (9)0.626 (3)0.053 (5)*
H80.665 (2)0.1498 (7)0.325 (3)0.036 (4)*
H110.149 (2)−0.0136 (8)0.506 (3)0.045 (5)*
H120.030 (3)0.0113 (9)0.191 (3)0.055 (6)*
H130.154 (2)0.0893 (8)0.035 (3)0.049 (5)*
H140.394 (2)0.1377 (8)0.199 (3)0.047 (5)*
U11U22U33U12U13U23
C10.0518 (10)0.0365 (8)0.0337 (9)−0.0007 (7)0.0115 (8)0.0015 (6)
C20.0436 (9)0.0365 (8)0.0316 (8)−0.0055 (7)0.0113 (7)−0.0002 (6)
C30.0524 (11)0.0441 (10)0.0421 (10)−0.0141 (8)0.0130 (8)−0.0057 (8)
C40.0421 (11)0.0669 (12)0.0456 (11)−0.0212 (10)0.0068 (9)−0.0065 (9)
C50.0371 (10)0.0647 (12)0.0497 (11)0.0009 (9)0.0041 (9)0.0057 (9)
C60.0433 (10)0.0409 (9)0.0520 (11)0.0000 (8)0.0040 (8)0.0030 (8)
C70.0375 (9)0.0359 (8)0.0333 (9)−0.0051 (7)0.0080 (7)0.0024 (6)
C80.0389 (9)0.0318 (8)0.0373 (9)−0.0013 (7)0.0040 (7)0.0031 (6)
C90.0321 (8)0.0308 (7)0.0361 (9)0.0020 (6)0.0044 (7)−0.0020 (6)
C100.0298 (8)0.0316 (7)0.0351 (9)0.0028 (6)0.0066 (7)0.0001 (6)
C110.0329 (9)0.0422 (9)0.0429 (10)−0.0047 (7)0.0054 (7)−0.0011 (7)
C120.0366 (10)0.0522 (10)0.0448 (11)−0.0082 (8)−0.0017 (8)−0.0046 (8)
C130.0426 (10)0.0487 (10)0.0351 (10)0.0033 (8)−0.0025 (8)0.0010 (7)
C140.0400 (10)0.0378 (8)0.0375 (9)−0.0014 (7)0.0041 (7)0.0041 (7)
C150.0316 (8)0.0309 (7)0.0385 (9)−0.0003 (6)0.0089 (7)−0.0008 (6)
N10.0415 (8)0.0396 (7)0.0325 (8)−0.0098 (6)0.0010 (6)0.0048 (6)
O10.0735 (10)0.0368 (6)0.0577 (9)0.0114 (6)0.0107 (7)0.0040 (6)
O20.0425 (7)0.0373 (6)0.0479 (7)0.0009 (5)−0.0001 (6)0.0049 (5)
O30.0525 (8)0.0435 (6)0.0369 (7)−0.0141 (6)−0.0020 (6)0.0051 (5)
O40.0461 (7)0.0540 (7)0.0419 (7)−0.0159 (6)0.0028 (6)0.0113 (6)
O4—H4A0.97 (3)C8—O21.4872 (18)
N1—H10.86 (2)C8—H80.983 (18)
C1—O11.203 (2)C9—N11.383 (2)
C1—O21.355 (2)C9—C141.405 (2)
C1—C21.469 (2)C9—C101.415 (2)
C2—C71.383 (2)C10—C111.397 (2)
C2—C31.384 (2)C10—C151.472 (2)
C3—C41.375 (3)C11—C121.371 (3)
C3—H30.98 (2)C11—H110.96 (2)
C4—C51.387 (3)C12—C131.380 (3)
C4—H40.93 (2)C12—H120.93 (2)
C5—C61.382 (3)C13—C141.378 (2)
C5—H50.94 (2)C13—H130.98 (2)
C6—C71.382 (2)C14—H140.948 (19)
C6—H60.963 (19)C15—O31.2271 (19)
C7—C81.501 (2)C15—O41.3168 (19)
C8—N11.409 (2)
C1—O2—C8110.76 (12)N1—C8—C7115.34 (14)
C15—O4—H4A109.6 (15)O2—C8—C7103.22 (12)
C9—N1—C8122.22 (14)N1—C8—H8110.1 (10)
C9—N1—H1118.1 (13)O2—C8—H8104.0 (10)
C8—N1—H1118.7 (13)C7—C8—H8111.9 (10)
O1—C1—O2121.82 (16)N1—C9—C14120.64 (15)
O1—C1—C2129.81 (16)N1—C9—C10121.49 (14)
O2—C1—C2108.36 (13)C14—C9—C10117.86 (14)
C7—C2—C3121.61 (16)C11—C10—C9119.13 (15)
C7—C2—C1108.84 (14)C11—C10—C15118.49 (14)
C3—C2—C1129.51 (15)C9—C10—C15122.37 (14)
C4—C3—C2117.92 (17)C12—C11—C10122.10 (16)
C4—C3—H3122.0 (12)C12—C11—H11121.2 (11)
C2—C3—H3120.0 (12)C10—C11—H11116.7 (11)
C3—C4—C5120.56 (18)C11—C12—C13118.70 (16)
C3—C4—H4120.3 (13)C11—C12—H12119.0 (12)
C5—C4—H4119.1 (13)C13—C12—H12122.3 (13)
C6—C5—C4121.62 (19)C14—C13—C12121.22 (17)
C6—C5—H5120.1 (12)C14—C13—H13117.3 (11)
C4—C5—H5118.3 (12)C12—C13—H13121.5 (11)
C5—C6—C7117.75 (17)C13—C14—C9120.98 (16)
C5—C6—H6122.0 (12)C13—C14—H14118.8 (11)
C7—C6—H6120.3 (12)C9—C14—H14120.2 (11)
C6—C7—C2120.54 (16)O3—C15—O4121.99 (15)
C6—C7—C8130.55 (15)O3—C15—C10123.52 (14)
C2—C7—C8108.71 (14)O4—C15—C10114.49 (13)
N1—C8—O2111.53 (14)
O1—C1—O2—C8177.50 (16)N1—C8—O2—C1127.43 (15)
C2—C1—O2—C8−1.67 (18)C7—C8—O2—C13.01 (18)
O1—C1—C2—C7−179.60 (18)O2—C8—N1—C972.79 (19)
O2—C1—C2—C7−0.52 (19)C7—C8—N1—C9−169.91 (14)
O1—C1—C2—C3−2.1 (3)C14—C9—N1—C8−4.3 (2)
O2—C1—C2—C3177.00 (17)C10—C9—N1—C8174.57 (15)
C7—C2—C3—C40.0 (3)N1—C9—C10—C11−177.90 (15)
C1—C2—C3—C4−177.23 (17)C14—C9—C10—C111.0 (2)
C2—C3—C4—C5−0.1 (3)N1—C9—C10—C151.1 (2)
C3—C4—C5—C60.1 (3)C14—C9—C10—C15−179.97 (15)
C4—C5—C6—C70.0 (3)C9—C10—C11—C12−1.2 (2)
C5—C6—C7—C2−0.1 (3)C15—C10—C11—C12179.71 (16)
C5—C6—C7—C8174.15 (19)C10—C11—C12—C130.9 (3)
C3—C2—C7—C60.1 (3)C11—C12—C13—C14−0.4 (3)
C1—C2—C7—C6177.86 (16)C12—C13—C14—C90.3 (3)
C3—C2—C7—C8−175.31 (16)N1—C9—C14—C13178.36 (16)
C1—C2—C7—C82.45 (19)C10—C9—C14—C13−0.5 (2)
C6—C7—C8—N160.0 (3)C11—C10—C15—O3−177.61 (16)
C2—C7—C8—N1−125.16 (15)C9—C10—C15—O33.4 (2)
C6—C7—C8—O2−178.07 (18)C11—C10—C15—O41.8 (2)
C2—C7—C8—O2−3.27 (18)C9—C10—C15—O4−177.24 (14)
D—H···AD—HH···AD···AD—H···A
N1—H1···O30.86 (2)2.074 (19)2.7004 (18)129.3 (16)
N1—H1···O1i0.86 (2)2.58 (2)3.281 (2)138.9 (15)
O4—H4A···O3ii0.97 (3)1.67 (3)2.6329 (17)174 (2)
C4—H4···O2iii0.93 (2)2.58 (2)3.464 (2)158.9 (17)
C8—H8···O1iv0.983 (18)2.580 (17)3.403 (2)141.4 (12)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O30.86 (2)2.074 (19)2.7004 (18)129.3 (16)
N1—H1⋯O1i0.86 (2)2.58 (2)3.281 (2)138.9 (15)
O4—H4A⋯O3ii0.97 (3)1.67 (3)2.6329 (17)174 (2)
C4—H4⋯O2iii0.93 (2)2.58 (2)3.464 (2)158.9 (17)
C8—H8⋯O1iv0.983 (18)2.580 (17)3.403 (2)141.4 (12)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  3 in total

1.  3-[(3-Oxo-1,3-dihydro-isobenzofuran-1-yl)amino]benzoic acid.

Authors:  Wenkuan Li; Handong Yin; Liyuan Wen; Kang Li; Weidong Fan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-30

2.  4-[(3-Oxo-1,3-dihydro-2-benzofuran-1-yl)amino]-benzoic acid.

Authors:  Chao-Jun Du
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-30

3.  2-Amino-3-(hy-droxy-meth-yl)pyridinium 2-benzoyl-benzoate monohydrate.

Authors:  Hakkı Yasin Odabaşoğlu; Orhan Büyükgüngör; Osman Ozan Avinç; Mustafa Odabaşoğlu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-17
  3 in total

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