| Literature DB >> 21202126 |
Muhammad Zareef, Rashid Iqbal, Muhammad Arfan, Masood Parvez.
Abstract
The title mol-ecule, C(12)H(12)N(2)O(3)S, is composed of two individually planar units, viz. 5-phenyl-1,3,4-oxadiazol-2-yl-sulfanyl and ethyl acetate, which are oriented at almost right angles [80.07 (8)°] with respect to each other. The structure is stabilized by weak inter-molecular C-H⋯O and C-H⋯N hydrogen bonds. The phenyl and oxadiazole rings show π-π stacking inter-actions [centroid-centroid distance = 3.846 (2) Å] and there is also a short π-inter-action between the carbonyl O atom and the oxadiazole ring [the distance from this O atom to the centroid of the oxadiazole ring is 3.156 (2) Å].Entities:
Year: 2008 PMID: 21202126 PMCID: PMC2961061 DOI: 10.1107/S1600536808007125
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H12N2O3S | |
| Monoclinic, | Melting point = 344–345 K |
| Hall symbol: -P 2ybc | Mo |
| Cell parameters from 5263 reflections | |
| θ = 3.7–27.5º | |
| µ = 0.26 mm−1 | |
| β = 103.59 (3)º | |
| Prism, colourless | |
| 0.16 × 0.10 × 0.08 mm |
| Nonius KappaCCD diffractometer | 2820 independent reflections |
| Radiation source: fine-focus sealed tube | 1943 reflections with |
| Monochromator: graphite | |
| θmax = 27.5º | |
| ω and φ scans | θmin = 3.7º |
| Absorption correction: multi-scan(SORTAV; Blessing, 1997) | |
| 5263 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max = 0.001 | |
| 2820 reflections | Δρmax = 0.25 e Å−3 |
| 165 parameters | Δρmin = −0.27 e Å−3 |
| 47 constraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.021 (3) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| S1 | 0.76489 (6) | 0.36024 (5) | 0.69782 (4) | 0.0336 (2) | |
| O1 | 0.67313 (14) | 0.20172 (11) | 0.54296 (10) | 0.0264 (3) | |
| O2 | 0.86894 (16) | 0.19182 (14) | 0.88791 (12) | 0.0412 (4) | |
| O3 | 1.12555 (15) | 0.22664 (13) | 0.90282 (11) | 0.0354 (4) | |
| N1 | 0.87361 (18) | 0.07562 (15) | 0.55872 (13) | 0.0307 (4) | |
| N2 | 0.91309 (18) | 0.16477 (15) | 0.63754 (13) | 0.0319 (4) | |
| C1 | 0.6404 (2) | 0.03494 (16) | 0.41660 (14) | 0.0245 (4) | |
| C2 | 0.7088 (2) | −0.06503 (17) | 0.37915 (15) | 0.0283 (5) | |
| H2 | 0.8131 | −0.0882 | 0.4116 | 0.034* | |
| C3 | 0.6246 (2) | −0.13002 (18) | 0.29499 (16) | 0.0339 (5) | |
| H3 | 0.6717 | −0.1972 | 0.2690 | 0.041* | |
| C4 | 0.4712 (2) | −0.09762 (19) | 0.24806 (16) | 0.0335 (5) | |
| H4 | 0.4130 | −0.1429 | 0.1905 | 0.040* | |
| C5 | 0.4040 (2) | 0.0005 (2) | 0.28557 (16) | 0.0342 (5) | |
| H5 | 0.2991 | 0.0225 | 0.2534 | 0.041* | |
| C6 | 0.4870 (2) | 0.06791 (19) | 0.36949 (15) | 0.0291 (5) | |
| H6 | 0.4397 | 0.1357 | 0.3945 | 0.035* | |
| C7 | 0.7333 (2) | 0.10069 (16) | 0.50595 (15) | 0.0245 (4) | |
| C8 | 0.7925 (2) | 0.23515 (17) | 0.62486 (15) | 0.0266 (4) | |
| C9 | 0.9529 (2) | 0.35400 (18) | 0.78938 (17) | 0.0337 (5) | |
| H9A | 1.0358 | 0.3499 | 0.7498 | 0.040* | |
| H9B | 0.9684 | 0.4302 | 0.8304 | 0.040* | |
| C10 | 0.9730 (2) | 0.24772 (19) | 0.86414 (16) | 0.0311 (5) | |
| C11 | 1.1623 (2) | 0.1290 (2) | 0.97896 (17) | 0.0392 (6) | |
| H11A | 1.1105 | 0.0528 | 0.9492 | 0.047* | |
| H11B | 1.1252 | 0.1498 | 1.0422 | 0.047* | |
| C12 | 1.3366 (2) | 0.1135 (2) | 1.00597 (17) | 0.0421 (6) | |
| H12A | 1.3655 | 0.0466 | 1.0558 | 0.051* | |
| H12B | 1.3864 | 0.1887 | 1.0373 | 0.051* | |
| H12C | 1.3722 | 0.0952 | 0.9425 | 0.051* |
| S1 | 0.0300 (3) | 0.0316 (3) | 0.0369 (3) | 0.0048 (2) | 0.0031 (2) | −0.0069 (2) |
| O1 | 0.0232 (7) | 0.0275 (7) | 0.0273 (7) | 0.0048 (6) | 0.0037 (5) | −0.0008 (6) |
| O2 | 0.0280 (7) | 0.0554 (10) | 0.0392 (9) | −0.0054 (7) | 0.0056 (7) | −0.0009 (8) |
| O3 | 0.0235 (7) | 0.0397 (8) | 0.0407 (9) | 0.0003 (6) | 0.0026 (6) | 0.0013 (7) |
| N1 | 0.0292 (8) | 0.0333 (10) | 0.0278 (9) | 0.0061 (7) | 0.0031 (7) | −0.0055 (8) |
| N2 | 0.0279 (9) | 0.0354 (10) | 0.0308 (10) | 0.0070 (8) | 0.0038 (7) | −0.0050 (8) |
| C1 | 0.0265 (9) | 0.0261 (10) | 0.0219 (10) | −0.0015 (8) | 0.0074 (8) | 0.0045 (8) |
| C2 | 0.0275 (10) | 0.0286 (10) | 0.0288 (11) | 0.0000 (9) | 0.0066 (8) | 0.0020 (9) |
| C3 | 0.0403 (12) | 0.0296 (11) | 0.0327 (12) | −0.0022 (10) | 0.0103 (9) | −0.0023 (9) |
| C4 | 0.0349 (11) | 0.0373 (12) | 0.0278 (11) | −0.0128 (10) | 0.0061 (9) | −0.0010 (9) |
| C5 | 0.0250 (10) | 0.0473 (13) | 0.0286 (11) | −0.0036 (10) | 0.0031 (9) | 0.0057 (10) |
| C6 | 0.0265 (10) | 0.0354 (11) | 0.0264 (11) | 0.0028 (9) | 0.0085 (8) | 0.0044 (9) |
| C7 | 0.0241 (9) | 0.0235 (10) | 0.0278 (10) | 0.0056 (8) | 0.0101 (8) | 0.0034 (8) |
| C8 | 0.0243 (9) | 0.0283 (10) | 0.0267 (10) | 0.0011 (9) | 0.0050 (8) | 0.0005 (8) |
| C9 | 0.0269 (10) | 0.0336 (11) | 0.0382 (12) | −0.0033 (9) | 0.0027 (9) | −0.0088 (9) |
| C10 | 0.0241 (10) | 0.0381 (12) | 0.0300 (11) | −0.0027 (9) | 0.0040 (8) | −0.0111 (9) |
| C11 | 0.0353 (11) | 0.0437 (14) | 0.0387 (13) | 0.0012 (10) | 0.0089 (10) | 0.0031 (10) |
| C12 | 0.0356 (12) | 0.0534 (15) | 0.0360 (13) | 0.0066 (11) | 0.0056 (10) | 0.0033 (11) |
| S1—C8 | 1.729 (2) | C3—H3 | 0.9500 |
| S1—C9 | 1.802 (2) | C4—C5 | 1.377 (3) |
| O1—C8 | 1.366 (2) | C4—H4 | 0.9500 |
| O1—C7 | 1.369 (2) | C5—C6 | 1.387 (3) |
| O2—C10 | 1.202 (2) | C5—H5 | 0.9500 |
| O3—C10 | 1.336 (2) | C6—H6 | 0.9500 |
| O3—C11 | 1.454 (3) | C9—C10 | 1.513 (3) |
| N1—C7 | 1.294 (2) | C9—H9A | 0.9900 |
| N1—N2 | 1.412 (2) | C9—H9B | 0.9900 |
| N2—C8 | 1.291 (2) | C11—C12 | 1.497 (3) |
| C1—C6 | 1.392 (2) | C11—H11A | 0.9900 |
| C1—C2 | 1.398 (3) | C11—H11B | 0.9900 |
| C1—C7 | 1.457 (3) | C12—H12A | 0.9800 |
| C2—C3 | 1.379 (3) | C12—H12B | 0.9800 |
| C2—H2 | 0.9500 | C12—H12C | 0.9800 |
| C3—C4 | 1.390 (3) | ||
| C8—S1—C9 | 96.66 (9) | O1—C7—C1 | 120.13 (15) |
| C8—O1—C7 | 102.24 (13) | N2—C8—O1 | 113.20 (17) |
| C10—O3—C11 | 115.56 (16) | N2—C8—S1 | 128.61 (15) |
| C7—N1—N2 | 106.58 (15) | O1—C8—S1 | 118.18 (13) |
| C8—N2—N1 | 105.66 (15) | C10—C9—S1 | 114.43 (14) |
| C6—C1—C2 | 119.91 (17) | C10—C9—H9A | 108.7 |
| C6—C1—C7 | 121.99 (18) | S1—C9—H9A | 108.7 |
| C2—C1—C7 | 118.10 (16) | C10—C9—H9B | 108.7 |
| C3—C2—C1 | 119.90 (18) | S1—C9—H9B | 108.7 |
| C3—C2—H2 | 120.0 | H9A—C9—H9B | 107.6 |
| C1—C2—H2 | 120.0 | O2—C10—O3 | 124.49 (19) |
| C2—C3—C4 | 120.3 (2) | O2—C10—C9 | 125.87 (18) |
| C2—C3—H3 | 119.8 | O3—C10—C9 | 109.62 (17) |
| C4—C3—H3 | 119.8 | O3—C11—C12 | 107.26 (18) |
| C5—C4—C3 | 119.56 (18) | O3—C11—H11A | 110.3 |
| C5—C4—H4 | 120.2 | C12—C11—H11A | 110.3 |
| C3—C4—H4 | 120.2 | O3—C11—H11B | 110.3 |
| C4—C5—C6 | 121.14 (18) | C12—C11—H11B | 110.3 |
| C4—C5—H5 | 119.4 | H11A—C11—H11B | 108.5 |
| C6—C5—H5 | 119.4 | C11—C12—H12A | 109.5 |
| C5—C6—C1 | 119.2 (2) | C11—C12—H12B | 109.5 |
| C5—C6—H6 | 120.4 | H12A—C12—H12B | 109.5 |
| C1—C6—H6 | 120.4 | C11—C12—H12C | 109.5 |
| N1—C7—O1 | 112.32 (16) | H12A—C12—H12C | 109.5 |
| N1—C7—C1 | 127.55 (18) | H12B—C12—H12C | 109.5 |
| C7—N1—N2—C8 | 0.1 (2) | C6—C1—C7—O1 | −3.2 (3) |
| C6—C1—C2—C3 | 0.6 (3) | C2—C1—C7—O1 | 177.68 (16) |
| C7—C1—C2—C3 | 179.73 (18) | N1—N2—C8—O1 | −0.3 (2) |
| C1—C2—C3—C4 | −0.9 (3) | N1—N2—C8—S1 | 178.66 (15) |
| C2—C3—C4—C5 | 0.5 (3) | C7—O1—C8—N2 | 0.4 (2) |
| C3—C4—C5—C6 | 0.1 (3) | C7—O1—C8—S1 | −178.68 (14) |
| C4—C5—C6—C1 | −0.3 (3) | C9—S1—C8—N2 | 0.1 (2) |
| C2—C1—C6—C5 | 0.0 (3) | C9—S1—C8—O1 | 179.01 (15) |
| C7—C1—C6—C5 | −179.09 (18) | C8—S1—C9—C10 | −69.82 (17) |
| N2—N1—C7—O1 | 0.2 (2) | C11—O3—C10—O2 | −0.3 (3) |
| N2—N1—C7—C1 | −179.84 (18) | C11—O3—C10—C9 | 177.96 (16) |
| C8—O1—C7—N1 | −0.4 (2) | S1—C9—C10—O2 | −22.7 (3) |
| C8—O1—C7—C1 | 179.66 (16) | S1—C9—C10—O3 | 159.06 (14) |
| C6—C1—C7—N1 | 176.80 (19) | C10—O3—C11—C12 | 175.61 (18) |
| C2—C1—C7—N1 | −2.3 (3) |
| H··· | ||||
| C4—H4···O2i | 0.95 | 2.51 | 3.268 (3) | 137 |
| C9—H9B···N1ii | 0.99 | 2.38 | 3.293 (3) | 153 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C4—H4⋯O2i | 0.95 | 2.51 | 3.268 (3) | 137 |
| C9—H9 | 0.99 | 2.38 | 3.293 (3) | 153 |
Symmetry codes: (i) ; (ii) .